mRNA_H-akashiwo_Contig840.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig840.2.1
Unique NamemRNA_H-akashiwo_Contig840.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A7S3XXU2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXU2_HETAK)

HSP 1 Score: 843 bits (2177), Expect = 5.010e-306
Identity = 458/490 (93.47%), Postives = 464/490 (94.69%), Query Frame = 1
Query:   64 MGVAWVSWAYCTACLVQITRGLIVDPKTPSAKTSTNIQKSHQRLLSSSSFSTSTRSPPVVWGNILRSDEEASIFVTVEARQDRSVDNVVGTSSTISNVVLSTRLDGDLKHKLAGMHGVGQNYHDSVLHAVDYVLSAAERMDGLRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVPWRAG 1533
            MGVAWVSWA CTACL+QITRGLIVDPKTPSAKTSTNIQKSHQRLL SSSFST   SPPVVWGNILRSDEEASIF TVE RQDRSV NVVGT STISNVVLST LD DL+HKLAGMHGVGQNYHDSVLHAVDYVLSAAERMDGLRQPRPLLQHALHVA FLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGIL+EVMQLDRVEERTVSFSQNKGSSL AQRDLAGTLLTLLSHASTRRDALVLHLALKLG LQ SASAVKHD+R CEEVQATAR ASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLA+QSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGAR VAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSA        GFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAA+GEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVPWRAG
Sbjct:    1 MGVAWVSWACCTACLLQITRGLIVDPKTPSAKTSTNIQKSHQRLLYSSSFSTPPCSPPVVWGNILRSDEEASIFATVEVRQDRSVYNVVGTCSTISNVVLSTSLDDDLEHKLAGMHGVGQNYHDSVLHAVDYVLSAAERMDGLRQPRPLLQHALHVAAFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILREVMQLDRVEERTVSFSQNKGSSLTAQRDLAGTLLTLLSHASTRRDALVLHLALKLGKLQLSASAVKHDKRWCEEVQATARVASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLADQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARAVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAGVGGDSAGGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAAAGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVPWRAG 490          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A7S3XXV9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXV9_HETAK)

HSP 1 Score: 672 bits (1735), Expect = 1.170e-240
Identity = 373/377 (98.94%), Postives = 375/377 (99.47%), Query Frame = 1
Query:   64 MGVAWVSWAYCTACLVQITRGLIVDPKTPSAKTSTNIQKSHQRLLSSSSFSTSTRSPPVVWGNILRSDEEASIFVTVEARQDRSVDNVVGTSSTISNVVLSTRLDGDLKHKLAGMHGVGQNYHDSVLHAVDYVLSAAERMDGLRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQ 1194
            MGVAWVSWA CTACL+QITRGLIVDPKTPSAKTSTNIQKSHQRLLSSSSFSTSTRSPPVVWGNILRSDEEASIFVTVEARQDRSVDNVVGTSSTISNVVLSTRLDGDLKHKLAGMHGVGQNYHDSVLHAVDYVLSAAERMDGLRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGIL+EVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATAR ASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQ
Sbjct:    1 MGVAWVSWACCTACLLQITRGLIVDPKTPSAKTSTNIQKSHQRLLSSSSFSTSTRSPPVVWGNILRSDEEASIFVTVEARQDRSVDNVVGTSSTISNVVLSTRLDGDLKHKLAGMHGVGQNYHDSVLHAVDYVLSAAERMDGLRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILREVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARVASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQ 377          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A6V1NSY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NSY6_HETAK)

HSP 1 Score: 147 bits (372), Expect = 4.860e-35
Identity = 105/337 (31.16%), Postives = 162/337 (48.07%), Query Frame = 1
Query:  511 LQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVP 1521
            L+ +  VA+ LS L +    ++A ++         + + +   FG+ V  +L+    ++R+E    SFS + G  + AQ+ L+  L+ L+   ST  D+L+L L   L  LQ    A   + +            +RQAL +Y PLAHR+G   LKN +EA GF+ LYPRS   V + L +Q + H ++L   +  ++            LA E     V + GRVK+P S+W KMV+K                      + SLD + D V VR++V PAAA        + +  CY +  +V  +W     R KDY+  PK NGY++LH T+ VP
Sbjct:  118 LEKSKRVASILSDLEMDRNTIIAGILHGMFSNTASARETIRSIFGSRVFQLLENAQAINRIENTARSFSLSHG--IKAQKLLSDNLMNLILCVSTNWDSLLLKLVFHLEELQDLIHASPKERK----------LIARQALDLYGPLAHRMGAYQLKNEIEALGFKYLYPRSFKRVSEHLHQQRLLHKSLLSHTMQEIQLALEESAVLDH-LADE-----VTISGRVKEPLSMWKKMVQK----------------------KSSLDLIQDAVAVRIIVKPAAAS-----PLNDDQACYLMNDIVHSIWESDSSRCKDYIRSPKKNGYQSLHATMNVP 409          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A7S2C5L2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5L2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.180e-28
Identity = 104/326 (31.90%), Postives = 158/326 (48.47%), Query Frame = 1
Query:  565 ELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQ---EVMQLDRVEERTVSFSQNKGS----SLNAQRDLAGTLLTLLSHASTRRDALVLHL----ALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDT 1509
            ++V+AA++  AVQ   IS  +V    GA V  + Q   E++QL   + R + ++ ++      S +   +L   L+T+ +       ALV H+     L  G    +A A + +  +       A  A+R+AL VYAPLAHRLG+N LKN LE  GF+ LYP+    + + LAE++  H  +L   +  L+            +       +V VEGR K PYS W K+++     +   +  A            ++D V+D + +R+V+ P A       A  GE LCY +  LV   WA    R KDY+A PK NGY+ALH T
Sbjct:  156 DVVLAAILFQAVQDGRISAADVKNEMGANVAALTQNSAEIIQLQS-DSRELLWNTDQAPLSRISPSQAENLGNMLITMSADWRVVTLALVHHVRHTRTLTEGCGTEAALATETETAAIRTRTREAFVAAREALDVYAPLAHRLGMNQLKNDLENLGFKHLYPQQHQLITEQLAERAEKHEVLLSEQLLVLKRVLQEDTLFMNNID------HVVVEGRQKSPYSTWRKLLKISEGARLSTSSLADTN---------AIDQVLDAIALRVVLKPDAQAAATRPAERGEALCYHVLELVHEQWAHMDFRVKDYLAEPKENGYQALHTT 465          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A3M2GMP3_ACTSX (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GMP3_ACTSX)

HSP 1 Score: 126 bits (316), Expect = 4.460e-27
Identity = 106/341 (31.09%), Postives = 157/341 (46.04%), Query Frame = 1
Query:  505 PLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSAS--AVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVP 1521
            P ++H L VAT ++  GL    V AA++  AV+   +SL E+   FG EV GI+  V +LDRV  R  S  Q + +S+            +++ A   R  L++ LA +L NLQ+ A+  A K +  +            R+ L VYAPLAHRLG+  +K  LE   F  LYPR  A ++Q++ +++      L  V+A ++               E G     V GR K  +S++ KMV KG                       S D++ D+VG+R++V+                 CY     +   W P  GR KDY+A PK N Y++LH TV  P
Sbjct:   62 PYIRHPLAVATIVAGQGLDDTSVAAALLHDAVEDTAVSLAELERDFGPEVAGIVDGVTKLDRV--RYDSKEQQQAASMRKM---------IIAIAQDLR-VLIIKLADRLHNLQTIAALPAFKQERTA------------RETLDVYAPLAHRLGMQEVKQQLEDLAFAALYPRRYAEIDQMVEQRAPERELYLAQVIADVQARL-----------AELGI-VAEVTGRPKHLWSIYEKMVVKGR----------------------SFDEIHDLVGIRVIVESVRD-------------CYAALGSIHAAWRPVQGRFKDYIAMPKFNLYQSLHTTVVGP 331          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A836CJV0_9STRA (RelA_SpoT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.100e-26
Identity = 123/396 (31.06%), Postives = 186/396 (46.97%), Query Frame = 1
Query:  382 DLKHKLA-GMHGVGQNYHDSVLHAVDYVLSAAERMDG-LRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHL-------ISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLT-----LLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGG--AASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVP 1521
            DL  KL  G+  +GQ  H  +  A    L+ A R+ G  R+ R  + H++ +   L  L +  + ++AA+++  +            S Q++   FG  V  +++    + R+E  T++ S  + SS     + A   L      +LS  S  R  ++L +A  L  ++++ASA     R  E  QA A+  + +AL V+APLAHRLG++ L   L+   F RLYPR +A +   +A ++  +AAVL    A L             +        V++ GR K+PYS+W KM+R  CA                      L DV D V +R+V       GD     AA    LC+   R+VR L+    GR KDYVA PKANGYR+LH T  +P
Sbjct:  119 DLVDKLREGLPYLGQVEHAELQRA----LAVALRVHGGTREGRERVAHSVSMCLILGELEMDVDALLAAILAGTLSPERGPVGVAGASSQDLQRRFGRRVVRLVESYEHVARLE--TLAQSYLRASSAAQGPEEAAEQLDRLRNLILSEVSDWR-VVILRVASHLQLMRAAASAPAAANR--ERAQA-AKALAHEALGVHAPLAHRLGIHQLVAELQDLAFARLYPRQNAAIRAQMAARAREYAAVLDRASAELTAALEADDEFMAQVES------VSLAGRAKEPYSMWRKMLRTRCA----------------------LADVHDAVALRVVFKARRRAGDGDAEYAARSTALCHDAMRIVRRLYPTLEGRFKDYVAAPKANGYRSLHATALMP 476          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A6J4M1D9_9ACTN (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase / GTP pyrophosphokinase, (P)ppGpp synthetase II n=2 Tax=uncultured Nocardioidaceae bacterium TaxID=253824 RepID=A0A6J4M1D9_9ACTN)

HSP 1 Score: 124 bits (311), Expect = 2.070e-26
Identity = 105/358 (29.33%), Postives = 172/358 (48.04%), Query Frame = 1
Query:  451 VDYVLSAAERMDGLRQPR---PLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVA-VEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTV 1512
            ++   S AERM G ++ +   P + H L VAT L+ LG++   +VAA++   V+    +L  +   FG EV  ++  V +LD+V           G    A+     T+  ++   S     LV+ LA +L N+++    +++ ++S +E +A      R+ L ++APLAHRLG+N LK  LE   F  L+P+    + +L+A+++ +    L+ V+  +E                + AR  A V GR K  YS++ KM+ +G                        L D+ D+VG+R++VD              +  CYG   ++ G W P PGR KD+VA PK N Y++LH TV
Sbjct:   61 IERAYSIAERMHGEQKRKSGEPYITHPLAVATILAELGMTETTLVAALLHDTVEDTPYTLDLLRVDFGEEVARLVDGVTKLDKV---------TYGEHTEAE-----TIRKMIVAMSRDIRVLVIKLADRLHNMRT----LRYLKQSTQEKKA------RETLEIFAPLAHRLGMNTLKWELEDLAFGTLHPKMYDEIVRLVADRAPSRDNYLQRVITQVEHDL-------------KSARIKATVTGRPKHYYSIYQKMIVRGR----------------------ELSDIYDLVGIRILVDE-------------DRDCYGALGIIHGRWNPVPGRFKDFVAMPKFNMYQSLHTTV 346          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A7C4THI4_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C4THI4_9ACTN)

HSP 1 Score: 124 bits (310), Expect = 2.610e-26
Identity = 101/360 (28.06%), Postives = 166/360 (46.11%), Query Frame = 1
Query:  451 VDYVLSAAERMDG---LRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVP 1521
            ++     A R  G    R   P L H + VA  ++ LGL    +  A++  AV+   I+++++   FGAE+ GI+  V +LDR+             S  AQ+  A +L  +L   +     L++ LA +L N+++ A+  +  ++            +++ L +YAPLAHRLG+  +K  LE   F+ L+P+  A +EQ++  ++      L+ V++ ++                    +  V+GR K  +S++ KMV +G                         DDV+D+VGVR++VD                 CYG    +  LWAP PGR KDY+A PK N Y++LH TV  P
Sbjct:   46 IEQAFEVARRAHGGQLRRSGEPYLAHPVGVAQIIAELGLDDVTIAGALLHDAVEDSSITVEDIEQVFGAEIAGIVDGVTKLDRLH----------FDSKEAQQ--AASLRKMLVAMARDIRVLLIKLADRLHNMRTIAALPEAKQQRI----------AKETLDIYAPLAHRLGIADVKWQLEDLAFKVLHPKRYAEIEQMVKTRAPEREEYLQLVLSQVKDRLADVHI------------HAQVQGRPKHYWSIYEKMVVRGK----------------------EFDDVLDLVGVRVIVDSVKD-------------CYGALGSIHALWAPVPGRFKDYIAMPKFNLYQSLHTTVVGP 336          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A0J0YHC1_9ACTN ((P)ppGpp synthetase, RelA/SpoT family n=8 Tax=root TaxID=1 RepID=A0A0J0YHC1_9ACTN)

HSP 1 Score: 123 bits (308), Expect = 4.610e-26
Identity = 101/357 (28.29%), Postives = 160/357 (44.82%), Query Frame = 1
Query:  457 YVLSAAERMDGLRQP-RPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVK-HDERSCEEVQATARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVP 1521
            Y ++A      LR+   P + H L VA  ++  G+    + AA++  AV+  +I+L+E+   FGAE+  I+  V +L+R+   T    Q            A T+  +L   +     LV+ LA +L N+++ A+      ER+ +E            L +YAPLAHRLG+  ++  LE   F  LYPR  A V+ ++AE++    A +  V+  +                       AV GR K  +S++ KMV +G A                       +++ D++G+RLVVD +               CY     +  +W P PGR KDY+A PK N Y++LH TV  P
Sbjct:   44 YRMAAGAHQGQLRRSGEPYITHPLAVAGIVARYGMDDVTIAAALLHDAVEDTVITLEELEEKFGAELTAIVDGVTKLERIHFDTKEAQQ------------AATMRKMLVAMAKDLRVLVIKLADRLHNMRTIAALPAWKQERTAQET-----------LDIYAPLAHRLGMQEIRQQLEDLCFSSLYPRRYAEVDHMVAERAPERDAYVDAVIDEIRDRLAEVNIT------------AAVTGRPKHLWSIYEKMVVRGKA----------------------FEEIFDLIGIRLVVDSSKD-------------CYAALGSIHAMWTPVPGRFKDYIAMPKFNLYQSLHTTVIGP 330          
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Match: A0A1Z9JNQ9_9ACTN (GTP pyrophosphokinase n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A1Z9JNQ9_9ACTN)

HSP 1 Score: 122 bits (305), Expect = 1.110e-25
Identity = 105/352 (29.83%), Postives = 158/352 (44.89%), Query Frame = 1
Query:  469 AAERMDGLRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAVQKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQRDLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQATARFA-SRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLAEQSIAHAAVLKGVVAGLEXXXXXXXXXXXXLAGEQGARYVAVEGRVKQPYSVWCKMVRKGCAPKTGGAGSAXXXXXXXXGFRGSLDDVMDIVGVRLVVDPAAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRALHDTVAVP 1521
            AA +    +   P + H + VA+ ++ +GL    + AA++  AV+   I L E+   FG +V  I+  V +LDRV   T    Q            A TL  +L   +     L++ LA +L           H+ R+   +Q T +   +R+ L VYAPLAHRLG+  ++N LE   F  LYP+  A +++L+AE++ A  A L+GV   +                ++ A   +V GR K  ++V+ KMV KG                       S +D+ D+VGVR+VV                   YG    +   W P  GR KDY+A PK N Y++LH TV  P
Sbjct:   49 AAHQGQRRKSGEPYILHPVAVASVVAEMGLDDVSIAAALLHDAVEDTGIELLEIRAEFGDDVAAIVDGVTKLDRVRFATKQAQQ------------AATLRKMLVAMARDLRVLLIKLADRL-----------HNMRTLGALQLTKQEQIARETLDVYAPLAHRLGMQEVRNELEDLAFAALYPKRYAEIDRLIAERAPAQEAYLEGVSETIGTRL------------DKAALDASVTGRRKHHWAVYEKMVIKGR----------------------SFEDIFDLVGVRVVVPSIRD-------------AYGALGSIHSTWKPVAGRFKDYIAMPKFNLYQSLHTTVVGP 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig840.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XXU2_HETAK5.010e-30693.47Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XXV9_HETAK1.170e-24098.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V1NSY6_HETAK4.860e-3531.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2C5L2_9STRA4.180e-2831.90Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3M2GMP3_ACTSX4.460e-2731.09Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A836CJV0_9STRA1.100e-2631.06RelA_SpoT domain-containing protein (Fragment) n=1... [more]
A0A6J4M1D9_9ACTN2.070e-2629.33Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohyd... [more]
A0A7C4THI4_9ACTN2.610e-2628.06Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A0J0YHC1_9ACTN4.610e-2628.29(P)ppGpp synthetase, RelA/SpoT family n=8 Tax=root... [more]
A0A1Z9JNQ9_9ACTN1.110e-2529.83GTP pyrophosphokinase n=4 Tax=Actinobacteria TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig840contigH-akashiwo_Contig840:391098..392631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1111069.TCCBUS3UF1_20340
PFAMsACT_4,HD_4,RelA_SpoT,TGS
Model size1534
Max annot lvl1297|Deinococcus-Thermus
KEGG rclassRC00002,RC00078
KEGG koko:K00951
KEGG ReactionR00429
KEGG Pathwayko00230,map00230
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.29e-27
EggNOG OGsCOG0317@1|root,COG0317@2|Bacteria,1WID2@1297|Deinococcus-Thermus
EC2.7.6.5
DescriptionIn eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Cds size1533
COG categoryKT
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388008.0608864-CDS-H-akashiwo_Contig840:391097..3926301681388008.0608864-CDS-H-akashiwo_Contig840:391097..392630Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig840 391098..392630 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig840.2.1prot_H-akashiwo_Contig840.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig840 391098..392630 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig840.2.1

>prot_H-akashiwo_Contig840.2.1 ID=prot_H-akashiwo_Contig840.2.1|Name=mRNA_H-akashiwo_Contig840.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=511bp
KRSNLNSQNHRSIYICRKKAKMGVAWVSWAYCTACLVQITRGLIVDPKTP
SAKTSTNIQKSHQRLLSSSSFSTSTRSPPVVWGNILRSDEEASIFVTVEA
RQDRSVDNVVGTSSTISNVVLSTRLDGDLKHKLAGMHGVGQNYHDSVLHA
VDYVLSAAERMDGLRQPRPLLQHALHVATFLSSLGLSSELVVAAVVSTAV
QKHLISLQEVGFSFGAEVEGILQEVMQLDRVEERTVSFSQNKGSSLNAQR
DLAGTLLTLLSHASTRRDALVLHLALKLGNLQSSASAVKHDERSCEEVQA
TARFASRQALLVYAPLAHRLGLNPLKNALEAEGFRRLYPRSSAHVEQLLA
EQSIAHAAVLKGVVAGLEGALAGAPGLAAGLAGEQGARYVAVEGRVKQPY
SVWCKMVRKGCAPKTGGAGSAGGGGNSAGGFRGSLDDVMDIVGVRLVVDP
AAAGGDDGGAASGEGLCYGLRRLVRGLWAPAPGRAKDYVARPKANGYRAL
HDTVAVPWRAG
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mRNA from alignment at H-akashiwo_Contig840:391098..392631+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig840.2.1 ID=mRNA_H-akashiwo_Contig840.2.1|Name=mRNA_H-akashiwo_Contig840.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1534bp|location=Sequence derived from alignment at H-akashiwo_Contig840:391098..392631+ (Heterosigma akashiwo CCMP452)
AAAAGATCCAATCTCAATTCTCAGAATCACAGGTCTATCTACATTTGTCG GAAAAAAGCCAAGATGGGGGTTGCTTGGGTCTCCTGGGCTTACTGTACTG CATGTTTGGTTCAAATAACTCGGGGGTTGATTGTTGACCCAAAAACCCCT TCCGCAAAGACCAGTACGAATATCCAAAAATCGCATCAACGATTACTATC TAGCTCCTCCTTCAGCACTTCTACTCGTTCTCCCCCAGTTGTGTGGGGCA ATATACTACGATCAGACGAGGAGGCCTCTATCTTTGTAACTGTCGAAGCC AGACAAGACCGCAGTGTTGACAACGTCGTTGGTACATCTTCTACCATATC AAATGTAGTTCTGTCAACAAGATTGGATGGCGACCTGAAACACAAACTAG CTGGGATGCATGGCGTGGGTCAAAACTATCATGATTCAGTGCTTCATGCA GTTGATTATGTGCTTAGTGCAGCAGAGAGAATGGACGGGCTTCGTCAGCC CCGACCGCTTCTGCAGCATGCGCTTCATGTTGCTACATTTCTTTCTTCTT TAGGATTGTCCAGTGAACTGGTTGTTGCTGCTGTGGTTTCCACTGCCGTT CAAAAACACCTCATATCTCTGCAAGAAGTAGGATTCTCTTTTGGGGCGGA AGTGGAGGGCATTCTCCAAGAGGTCATGCAGTTGGATCGTGTGGAGGAGC GGACGGTTTCATTCTCTCAAAACAAGGGCAGCAGCCTGAATGCGCAGCGC GACCTAGCAGGCACCTTGCTCACACTCCTGTCACACGCCTCCACTCGGAG AGATGCTTTGGTGCTGCACTTGGCCTTGAAGCTCGGGAACCTTCAGTCGT CTGCCTCAGCAGTGAAGCATGATGAAAGATCGTGTGAAGAAGTGCAGGCC ACTGCGCGATTTGCATCAAGACAGGCACTGTTGGTGTATGCACCCCTGGC TCACCGTTTGGGGCTGAACCCACTGAAGAACGCACTGGAAGCTGAGGGCT TTCGCCGGTTGTACCCGCGCTCATCCGCACATGTGGAGCAGTTGCTGGCA GAACAGTCAATCGCTCACGCGGCGGTGCTGAAGGGTGTGGTGGCAGGCCT CGAAGGCGCTCTGGCCGGAGCGCCTGGGCTGGCCGCCGGGCTGGCCGGTG AACAGGGCGCCCGGTATGTTGCCGTGGAGGGCCGGGTCAAGCAGCCGTAC TCAGTCTGGTGCAAGATGGTGCGCAAAGGCTGCGCGCCCAAGACGGGTGG GGCAGGCAGTGCTGGTGGCGGCGGCAACAGCGCCGGCGGGTTcCGGGGGT CCtTGGATGACGtGATGGACATTGTGGGGGTACGTCTGGTGGTGGACCCA GCGGCGGCGGGCGGCGACGACGGCGGCGCGGCGTCGGGGGAGGGCCTGTG CTACGGGCTGCGGCGGCTGGTGCGCGGGCTGTGGGCGCCGGCCCCCGGGC GGGCCAAGGACTACGTGGCGCGGCCGAAGGCCAACGGGTACCGTGCGCTG CACGACACGGTGGCCGTGCCGTGGCGGGCGGGCG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig840:391098..392631+

>mRNA_H-akashiwo_Contig840.2.1 ID=mRNA_H-akashiwo_Contig840.2.1|Name=mRNA_H-akashiwo_Contig840.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1533bp|location=Sequence derived from alignment at H-akashiwo_Contig840:391098..392631+ (Heterosigma akashiwo CCMP452)
AAAAGATCCAATCTCAATTCTCAGAATCACAGGTCTATCTACATTTGTCG
GAAAAAAGCCAAGATGGGGGTTGCTTGGGTCTCCTGGGCTTACTGTACTG
CATGTTTGGTTCAAATAACTCGGGGGTTGATTGTTGACCCAAAAACCCCT
TCCGCAAAGACCAGTACGAATATCCAAAAATCGCATCAACGATTACTATC
TAGCTCCTCCTTCAGCACTTCTACTCGTTCTCCCCCAGTTGTGTGGGGCA
ATATACTACGATCAGACGAGGAGGCCTCTATCTTTGTAACTGTCGAAGCC
AGACAAGACCGCAGTGTTGACAACGTCGTTGGTACATCTTCTACCATATC
AAATGTAGTTCTGTCAACAAGATTGGATGGCGACCTGAAACACAAACTAG
CTGGGATGCATGGCGTGGGTCAAAACTATCATGATTCAGTGCTTCATGCA
GTTGATTATGTGCTTAGTGCAGCAGAGAGAATGGACGGGCTTCGTCAGCC
CCGACCGCTTCTGCAGCATGCGCTTCATGTTGCTACATTTCTTTCTTCTT
TAGGATTGTCCAGTGAACTGGTTGTTGCTGCTGTGGTTTCCACTGCCGTT
CAAAAACACCTCATATCTCTGCAAGAAGTAGGATTCTCTTTTGGGGCGGA
AGTGGAGGGCATTCTCCAAGAGGTCATGCAGTTGGATCGTGTGGAGGAGC
GGACGGTTTCATTCTCTCAAAACAAGGGCAGCAGCCTGAATGCGCAGCGC
GACCTAGCAGGCACCTTGCTCACACTCCTGTCACACGCCTCCACTCGGAG
AGATGCTTTGGTGCTGCACTTGGCCTTGAAGCTCGGGAACCTTCAGTCGT
CTGCCTCAGCAGTGAAGCATGATGAAAGATCGTGTGAAGAAGTGCAGGCC
ACTGCGCGATTTGCATCAAGACAGGCACTGTTGGTGTATGCACCCCTGGC
TCACCGTTTGGGGCTGAACCCACTGAAGAACGCACTGGAAGCTGAGGGCT
TTCGCCGGTTGTACCCGCGCTCATCCGCACATGTGGAGCAGTTGCTGGCA
GAACAGTCAATCGCTCACGCGGCGGTGCTGAAGGGTGTGGTGGCAGGCCT
CGAAGGCGCTCTGGCCGGAGCGCCTGGGCTGGCCGCCGGGCTGGCCGGTG
AACAGGGCGCCCGGTATGTTGCCGTGGAGGGCCGGGTCAAGCAGCCGTAC
TCAGTCTGGTGCAAGATGGTGCGCAAAGGCTGCGCGCCCAAGACGGGTGG
GGCAGGCAGTGCTGGTGGCGGCGGCAACAGCGCCGGCGGGTTcCGGGGGT
CCtTGGATGACGtGATGGACATTGTGGGGGTACGTCTGGTGGTGGACCCA
GCGGCGGCGGGCGGCGACGACGGCGGCGCGGCGTCGGGGGAGGGCCTGTG
CTACGGGCTGCGGCGGCTGGTGCGCGGGCTGTGGGCGCCGGCCCCCGGGC
GGGCCAAGGACTACGTGGCGCGGCCGAAGGCCAACGGGTACCGTGCGCTG
CACGACACGGTGGCCGTGCCGTGGCGGGCGGGC
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