mRNA_H-akashiwo_Contig84.54.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig84.54.1
Unique NamemRNA_H-akashiwo_Contig84.54.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A6S9FRC6_HETAK (Hypothetical protein n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRC6_HETAK)

HSP 1 Score: 633 bits (1633), Expect = 4.210e-228
Identity = 326/331 (98.49%), Postives = 327/331 (98.79%), Query Frame = -3
Query:   74 MSDNANENGNGAVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSWNH 1066
            MSDNANENGNGAVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEA E DYIDESEVLTMADE NHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKL TMD+DELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSWNH
Sbjct:    1 MSDNANENGNGAVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAIEADYIDESEVLTMADEENHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLTTMDEDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSWNH 331          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A7S3ZPL8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPL8_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 1.890e-179
Identity = 263/318 (82.70%), Postives = 291/318 (91.51%), Query Frame = -3
Query:   80 GTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGG--EHDSDGVPKKRKLHGHTETQLYGSSW 1027
            GT  VK G+A+MLKGGVIMDV+  EQARIAE AGA AVMALERIPADIR DGG ARMSDP+MI+GIK+AV+IPVMAKARIGHFVEAQ+LEAAEVDYIDESEVLTMADE NHINKNKF VPFVCGCRNLGEALRR+AEGA+MLRTKGEAGTGNVVEAVRHARTV  +I+ L TMD+DELFVAAKEMQAPY+LVK+VA+ G+LPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKS DP KRA+AIV+AV +Y++PK+L E ST LG+AMVGISD+KGD VNFRDREGG  E  ++G+PKKRKLHGHTETQLYGSSW
Sbjct:   18 GTADVKIGMAKMLKGGVIMDVIDAEQARIAEAAGAVAVMALERIPADIRADGGVARMSDPQMIEGIKKAVTIPVMAKARIGHFVEAQVLEAAEVDYIDESEVLTMADEDNHINKNKFTVPFVCGCRNLGEALRRVAEGASMLRTKGEAGTGNVVEAVRHARTVQKQIKMLTTMDEDELFVAAKEMQAPYELVKQVAEEGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSEDPEKRAKAIVRAVAHYSDPKVLLETSTNLGKAMVGISDVKGDAVNFRDREGGAKEATAEGIPKKRKLHGHTETQLYGSSW 335          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A4D9CVF0_9STRA (SOR_SNZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVF0_9STRA)

HSP 1 Score: 509 bits (1310), Expect = 1.140e-178
Identity = 274/342 (80.12%), Postives = 297/342 (86.84%), Query Frame = -3
Query:   77 MSDNANENGN------------GAVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSWN 1066
            M+ +AN NG+            GAVGTF VKAGLAQMLKGGVIMDVV  EQA+IAE AGA AVMALERIPADIR DGG ARMSDP MIK IK AV+IPVMAKARIGHFVEAQILE  EVDYIDESEVLTMADE NHINKNKF VPFVCGCR+LGEALRR+AEGAAMLRTKGEAGTGNVVEAVRHARTV  EIR+LKTMD+DELFV AK+++AP +LV+EVA+TGKLPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +P KRARAIVQAVT++ NP++LAEVST LG  MVGISDIKGD VNFRDREGG    DGVP K++LHG TETQLYGSSWN
Sbjct:    1 MNGHANGNGSTHGGPSSSSTSTGAVGTFRVKAGLAQMLKGGVIMDVVDVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPAMIKEIKAAVTIPVMAKARIGHFVEAQILETIEVDYIDESEVLTMADEDNHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLKTMDEDELFVYAKDIRAPLELVQEVARTGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNPQVLAEVSTKLGVPMVGISDIKGDPVNFRDREGGVA-GDGVPPKKQLHGATETQLYGSSWN 341          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A6U3QAD2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QAD2_9STRA)

HSP 1 Score: 504 bits (1297), Expect = 4.080e-176
Identity = 266/332 (80.12%), Postives = 291/332 (87.65%), Query Frame = -3
Query:   80 KMSDNANENGNGA-VGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDG-VPKKRKLHGHTETQLYGSSW 1069
            KM+     NGNGA +GT TVK GLAQMLKGGVIMDV+  EQA+IAE AGA AVMALERIPADIR DGG ARMSDP MI  IK AV+IPVMAKARIGHFVEAQILEA E+DYIDESEVLTMADE NHI+KN FNVPFVCGCRNLGEALRRIAEG AMLRTKGEAGTGN+VEAVRHARTV  EIR+L TM  DEL+VAAKE++APY+LVK+VA+TGKLPVVNFAAGGVATPADAA+MMQLGMDGVFVGSGIFKS +PA RA AIV+A T+Y +PK+L EVSTGLG AMVGISDIKGD VNFRDREGGE+  +G VP K+ LHG TETQ+YGSSW
Sbjct:   50 KMTGTNGSNGNGAKIGTSTVKQGLAQMLKGGVIMDVMNVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPAMILEIKNAVTIPVMAKARIGHFVEAQILEACEIDYIDESEVLTMADEVNHIDKNAFNVPFVCGCRNLGEALRRIAEGCAMLRTKGEAGTGNIVEAVRHARTVQGEIRRLTTMSKDELYVAAKELRAPYELVKKVAETGKLPVVNFAAGGVATPADAAIMMQLGMDGVFVGSGIFKSENPAARAAAIVRATTHYKDPKVLMEVSTGLGPAMVGISDIKGDPVNFRDREGGEYSYEGRVPPKKHLHGATETQMYGSSW 381          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A7S3JZ24_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZ24_9STRA)

HSP 1 Score: 501 bits (1290), Expect = 5.480e-176
Identity = 263/326 (80.67%), Postives = 287/326 (88.04%), Query Frame = -3
Query:   68 NGNGAVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSWNH*K 1045
            N     G+FTVK+G+A+ L GGVIMDVVTPEQARIAEEAGA AVMALERIPADIR DGG ARMSDP MIKGIK+AV+IPVMAKARIGHFVEAQILEA   DYIDESEVLTMADE +HINKNKF VPFVCGCRNLGEALRR+AEGAAMLRTKGEAGTGNVVEAVRHARTV +EIRKL++MD+DELF  AK M APY LV+EVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKS +PAKRA+AIV AVT++ NP++LA+VST LG+ MVGISD+  D VNFRDREGG      +PKKRKL G TETQLYGSSWN+ K
Sbjct:    3 NNGATTGSFTVKSGMARQLVGGVIMDVVTPEQARIAEEAGAVAVMALERIPADIRADGGVARMSDPSMIKGIKDAVTIPVMAKARIGHFVEAQILEAIGTDYIDESEVLTMADEDHHINKNKFKVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQSEIRKLQSMDEDELFTTAKLMGAPYHLVQEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSSNPAKRAKAIVAAVTHFKNPEVLAKVSTDLGKPMVGISDLDSDNVNFRDREGG----GSIPKKRKLSGKTETQLYGSSWNYAK 324          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A7S2XXS2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS2_9STRA)

HSP 1 Score: 495 bits (1275), Expect = 7.300e-174
Identity = 259/315 (82.22%), Postives = 283/315 (89.84%), Query Frame = -3
Query:   80 TFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSW 1024
            TFTVKAGLA+MLKGGVIMDVVTPEQARIAEEAGA AVMALE+IPADIR  GG ARMSDPEM+K IK++VSIPVMAKARIGHFVEAQILEA E+DYIDESEVLTMADE NHINKNKF VPFVCGCRNLGEALRR+AEGAAMLRTKGEAGTGN+VEAVRH R V  EIR+LKTMD+DELF  AK++ AP +LVKEVAKTG+LPVVNFAAGGVATPADAA+MMQLGMDGVFVGSGIFKS +P++RA+AIVQA T+YNNPKILAEVS  LG+AMVGISD+K D VNFRDREGG+H   G   KR+  G TE QLYGSSW
Sbjct:    1 TFTVKAGLAKMLKGGVIMDVVTPEQARIAEEAGAVAVMALEKIPADIRAGGGVARMSDPEMVKEIKKSVSIPVMAKARIGHFVEAQILEACEIDYIDESEVLTMADEDNHINKNKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNIVEAVRHCRQVYKEIRRLKTMDEDELFTYAKDIGAPLELVKEVAKTGQLPVVNFAAGGVATPADAAMMMQLGMDGVFVGSGIFKSTNPSERAKAIVQATTHYNNPKILAEVSANLGEAMVGISDLKSDPVNFRDREGGDH---GHHAKRQRLGATEAQLYGSSW 312          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A835YLJ1_9STRA (SOR/SNZ family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ1_9STRA)

HSP 1 Score: 494 bits (1273), Expect = 3.630e-173
Identity = 267/338 (78.99%), Postives = 286/338 (84.62%), Query Frame = -3
Query:   80 MSDNANENGNG---------AVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSW 1066
            M+  AN + NG           GT+ VKAGLAQMLKGGVIMDV+  EQARIAEEAGA AVMALERIPADIR DGG ARMSDPEMI  IK+AVSIPVMAKARIGHFVEAQILEA E+DYIDESEVLTMADE NHINKNKF VPFVCGCRNLGEALRR+AEGAAMLRTKGEAGTGNVVEAVRHAR V  E+R +  MD+DELFV AK +QAP++LVKEVA+TGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKS D  KRA+AIVQAVT++N+ KILAEVST LG AMVGISDIK D VNFRDREG       +PKKRKL G TE QLYGSSW
Sbjct:    1 MAPGANGHANGHAEAAETGILTGTYRVKAGLAQMLKGGVIMDVINVEQARIAEEAGAVAVMALERIPADIRKDGGVARMSDPEMITEIKKAVSIPVMAKARIGHFVEAQILEAIEIDYIDESEVLTMADEDNHINKNKFKVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARQVQKELRMVAAMDEDELFVFAKHIQAPFELVKEVARTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSTDAVKRAKAIVQAVTHFNDAKILAEVSTSLGPAMVGISDIKSDPVNFRDREGASEGQ--IPKKRKLTGPTEIQLYGSSW 336          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A7S1B961_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B961_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 5.100e-173
Identity = 259/317 (81.70%), Postives = 285/317 (89.91%), Query Frame = -3
Query:   77 GTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDGVPKKRKLHGHTETQLYGSSWN 1027
            GT TVK GLAQMLKGGVIMDV+  EQA+IAE+AGA AVMALERIPADIR DGG ARMSDPEMI  IK AV+IPVMAK+RIGHFVE+QILEA E+DYIDESEVLTMADEANHI+KN F+VPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGN+VEAVRHARTV +EIR+L TM +DEL+VAAKE+QAP +LV++VAKTG+LPVVNFAAGG+ATPADAALMMQLGMDGVFVGSGIFKS DPAKRA AIV+A T+Y +PK+L E ST LG+AMVGISDIKGD VNFRDREGG      VP KR+LHG TETQLYGSSWN
Sbjct:   15 GTSTVKQGLAQMLKGGVIMDVMNVEQAKIAEKAGAVAVMALERIPADIRRDGGVARMSDPEMILEIKNAVTIPVMAKSRIGHFVESQILEACEIDYIDESEVLTMADEANHIDKNAFSVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNIVEAVRHARTVHSEIRRLTTMAEDELYVAAKELQAPLELVRQVAKTGRLPVVNFAAGGIATPADAALMMQLGMDGVFVGSGIFKSTDPAKRAAAIVRATTHYKDPKVLMECSTNLGKAMVGISDIKGDPVNFRDREGGGM----VPPKRELHGPTETQLYGSSWN 327          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A1E7FG75_9STRA (Vitamin B6 biosynthesis protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG75_9STRA)

HSP 1 Score: 490 bits (1262), Expect = 1.380e-171
Identity = 257/332 (77.41%), Postives = 291/332 (87.65%), Query Frame = -3
Query:   77 MSD-NANENGNGAVGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDG-VPKKRKLHGHTETQLYGSSWN 1066
            MSD N N N +  VGT TVK GLAQMLKGGVIMDV+  EQA++AE AGA AVMALERIPADIR DGG ARMSDP MI+ IK AV+IPVMAKARIGHFVEAQILEA EVD+IDESEVLTMAD+ +H++K ++NVPFVCGCR+LGEALRRIAEGA+MLRTKGEAGTGNVVEAVRHAR V  +IR+LK+M  DEL+VAAKEM+APY+LVK+VA+ GKLPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +P  RARAIVQA T++ +PK+L E STGLG AMVGI DIK D VNFRDREGGE+  +G VP K++LHGHTETQ+YGSSWN
Sbjct:    1 MSDSNGNGNESARVGTSTVKQGLAQMLKGGVIMDVMNVEQAKLAEAAGAVAVMALERIPADIRRDGGVARMSDPLMIQEIKNAVTIPVMAKARIGHFVEAQILEALEVDFIDESEVLTMADDTHHLDKTQYNVPFVCGCRDLGEALRRIAEGASMLRTKGEAGTGNVVEAVRHARQVQGDIRRLKSMSKDELYVAAKEMRAPYELVKQVAEAGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSANPEARARAIVQATTHFRDPKVLVECSTGLGPAMVGICDIKADPVNFRDREGGEYTYEGKVPPKKELHGHTETQMYGSSWN 332          
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Match: A0A448Z5Q5_9STRA (SOR_SNZ domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=A0A448Z5Q5_9STRA)

HSP 1 Score: 487 bits (1254), Expect = 2.440e-170
Identity = 253/320 (79.06%), Postives = 285/320 (89.06%), Query Frame = -3
Query:   74 VGTFTVKAGLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALERIPADIRYDGGCARMSDPEMIKGIKEAVSIPVMAKARIGHFVEAQILEAAEVDYIDESEVLTMADEANHINKNKFNVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARTVMAEIRKLKTMDDDELFVAAKEMQAPYDLVKEVAKTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAIVQAVTNYNNPKILAEVSTGLGQAMVGISDIKGDKVNFRDREGGEHDSDG-VPKKRKLHGHTETQLYGSSWNH 1030
            VGT TVK GLAQMLKGGVIMDV+  EQA+IAE AGA AVMALERIPADIR DGG ARMSDP +I+ IK AV+IPVMAKARIGHFVEAQILEA EVDYIDESEVLTMAD+ +HI+K +F+VPFVCGCRNLGEALRRIAEGA+MLRTKGEAGTGNVVEAVRHAR V  +IR+L+TM  DELFVAAKE++APYDLVK++A+ GKLP+VNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +P  RARAIVQA T+Y +PK+L +VSTGLG AMVGI DIKGD VNFRDREGGE+   G VP K++L G+TETQ+YGSSWN+
Sbjct:   16 VGTSTVKQGLAQMLKGGVIMDVMNVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPSLIQEIKNAVTIPVMAKARIGHFVEAQILEACEVDYIDESEVLTMADDVHHIDKTQFSVPFVCGCRNLGEALRRIAEGASMLRTKGEAGTGNVVEAVRHARQVQGDIRRLQTMSKDELFVAAKELRAPYDLVKQIAEDGKLPIVNFAAGGVATPADAALMMQLGVDGVFVGSGIFKSANPEARARAIVQATTHYKDPKVLMDVSTGLGPAMVGICDIKGDPVNFRDREGGEYTYSGKVPPKKELSGYTETQMYGSSWNN 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig84.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S9FRC6_HETAK4.210e-22898.49Hypothetical protein n=5 Tax=Heterosigma akashiwo ... [more]
A0A7S3ZPL8_9STRA1.890e-17982.70Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9CVF0_9STRA1.140e-17880.12SOR_SNZ domain-containing protein n=3 Tax=Monodops... [more]
A0A6U3QAD2_9STRA4.080e-17680.12Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3JZ24_9STRA5.480e-17680.67Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2XXS2_9STRA7.300e-17482.22Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A835YLJ1_9STRA3.630e-17378.99SOR/SNZ family-domain-containing protein n=1 Tax=T... [more]
A0A7S1B961_9STRA5.100e-17381.70Hypothetical protein n=4 Tax=Corethron hystrix Tax... [more]
A0A1E7FG75_9STRA1.380e-17177.41Vitamin B6 biosynthesis protein n=1 Tax=Fragilario... [more]
A0A448Z5Q5_9STRA2.440e-17079.06SOR_SNZ domain-containing protein n=8 Tax=Bacillar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig84contigH-akashiwo_Contig84:1905789..1906928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1140
Hectar predicted targeting categoryother localisation
Exons1
Cds size1026
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388007.8945982-UTR-H-akashiwo_Contig84:1905788..19058341681388007.8945982-UTR-H-akashiwo_Contig84:1905788..1905834Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig84 1905789..1905834 +
1681388007.916951-UTR-H-akashiwo_Contig84:1906860..19069281681388007.916951-UTR-H-akashiwo_Contig84:1906860..1906928Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig84 1906861..1906928 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388007.9066722-CDS-H-akashiwo_Contig84:1905834..19068601681388007.9066722-CDS-H-akashiwo_Contig84:1905834..1906860Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 1905835..1906860 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig84.54.1prot_H-akashiwo_Contig84.54.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig84 1905835..1906860 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig84.54.1

>prot_H-akashiwo_Contig84.54.1 ID=prot_H-akashiwo_Contig84.54.1|Name=mRNA_H-akashiwo_Contig84.54.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=342bp
MWTGTQTLSVIPGRTIKLCLCMAMELPLLWHTIRVMLPTLPVSEVHLVPL
DVTDSHHGLPKPSGHLRQNFWVVVVGHSLHNSASALGRVARLEDTRPHKH
TIHSQLHHQSSICRGGHATSSKVHNRQLACLRHLLDQVIGRLHFLCSHKQ
LIIIHGFEFPDLCHHCASVANSLHHITSTSLALGAEHSSTFSNSSEGLTQ
VPATTYKRYIELVLIDMVGFICHSKHLTLIDVVDFCSFQDLSFHEVANAG
FGHNGNAHCLFNSFDHLGVRHARTSAIVTDISRDPFKGHDGASSSLLGDS
GLLGGDHIHNHTTLEHLGKTRFDCKSSHSPISVLIGVIAHF*
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mRNA from alignment at H-akashiwo_Contig84:1905789..1906928+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig84.54.1 ID=mRNA_H-akashiwo_Contig84.54.1|Name=mRNA_H-akashiwo_Contig84.54.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1140bp|location=Sequence derived from alignment at H-akashiwo_Contig84:1905789..1906928+ (Heterosigma akashiwo CCMP452)
GCGGCAAAAGTTAAAAAATAACTAAAAACACTTACATCAATTATACATGT GGACGGGGACTCAAACACTTTCAGTGATTCCAGGACGAACCATAAAGTTG TGTCTCTGTATGGCCATGGAGCTTCCTCTTCTTTGGCACACCATCAGAGT CATGCTCCCCACCCTCCCTGTCTCTGAAGTTCACCTTGTCCCCCTTGATG TCACTGATTCCCACCATGGCCTGCCCAAGCCCAGTGGACACCTCCGCCAG AATTTTTGGGTTGTTGTAGTTGGTCACAGCCTGCACAATAGCGCGAGCGC GCTTGGCAGGGTCGCCAGACTTGAAGATACCCGACCCCACAAACACACCA TCCATTCCCAGCTGCATCATCAGAGCAGCATCTGCAGGGGTGGCCACGCC ACCAGCAGCAAAGTTCACAACAGGCAGCTTGCCTGTCTTCGCCACCTCCT TGACCAGGTCATAGGGCGCCTGCATTTCCTTTGCAGCCACAAACAGCTCA TCATCATCCATGGTTTTGAGTTTCCTGATCTCTGCCATCACTGTGCGAGC GTGGCGAACAGCCTCCACCACATTACCAGTACCAGCCTCGCCCTTGGTGC GGAGCATAGCAGCACCTTCAGCAATTCTTCTGAGGGCCTCACCCAGGTTC CTGCAACCACATACAAAAGGTACATTGAACTTGTTCTTATTGATATGGTT GGCTTCATCTGCCATAGTAAGCACCTCACTCTCATCGATGTAGTCGACTT CTGCAGCTTCCAGGATCTGAGCTTCCACGAAGTGGCCAATGCGGGCTTTG GCCATAACGGGAATGCTCACTGCCTCTTTAATTCCTTTGATCATCTCGGG GTCAGACATGCGCGCACATCCGCCATCGTAACGGATATCAGCCGGGATCC GTTCAAGGGCCATGACGGCGCAAGCTCCAGCCTCCTCGGCGATTCTGGCT TGCTCGGGGGTGACCACATCCATAATCACACCACCCTTGAGCATCTGGGC AAGACCCGCTTTGACTGTAAAAGTTCCCACAGCCCCATTTCCGTTCTCAT TGGCGTTATCGCTCATTTTTAACACACTAAAAGCTATAATTAAACTATAC CGGCGTATGTAGTTGGTACTTGCTGTGCAGACGTTCTGTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig84:1905789..1906928+

>mRNA_H-akashiwo_Contig84.54.1 ID=mRNA_H-akashiwo_Contig84.54.1|Name=mRNA_H-akashiwo_Contig84.54.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1026bp|location=Sequence derived from alignment at H-akashiwo_Contig84:1905789..1906928+ (Heterosigma akashiwo CCMP452)
ATGTGGACGGGGACTCAAACACTTTCAGTGATTCCAGGACGAACCATAAA
GTTGTGTCTCTGTATGGCCATGGAGCTTCCTCTTCTTTGGCACACCATCA
GAGTCATGCTCCCCACCCTCCCTGTCTCTGAAGTTCACCTTGTCCCCCTT
GATGTCACTGATTCCCACCATGGCCTGCCCAAGCCCAGTGGACACCTCCG
CCAGAATTTTTGGGTTGTTGTAGTTGGTCACAGCCTGCACAATAGCGCGA
GCGCGCTTGGCAGGGTCGCCAGACTTGAAGATACCCGACCCCACAAACAC
ACCATCCATTCCCAGCTGCATCATCAGAGCAGCATCTGCAGGGGTGGCCA
CGCCACCAGCAGCAAAGTTCACAACAGGCAGCTTGCCTGTCTTCGCCACC
TCCTTGACCAGGTCATAGGGCGCCTGCATTTCCTTTGCAGCCACAAACAG
CTCATCATCATCCATGGTTTTGAGTTTCCTGATCTCTGCCATCACTGTGC
GAGCGTGGCGAACAGCCTCCACCACATTACCAGTACCAGCCTCGCCCTTG
GTGCGGAGCATAGCAGCACCTTCAGCAATTCTTCTGAGGGCCTCACCCAG
GTTCCTGCAACCACATACAAAAGGTACATTGAACTTGTTCTTATTGATAT
GGTTGGCTTCATCTGCCATAGTAAGCACCTCACTCTCATCGATGTAGTCG
ACTTCTGCAGCTTCCAGGATCTGAGCTTCCACGAAGTGGCCAATGCGGGC
TTTGGCCATAACGGGAATGCTCACTGCCTCTTTAATTCCTTTGATCATCT
CGGGGTCAGACATGCGCGCACATCCGCCATCGTAACGGATATCAGCCGGG
ATCCGTTCAAGGGCCATGACGGCGCAAGCTCCAGCCTCCTCGGCGATTCT
GGCTTGCTCGGGGGTGACCACATCCATAATCACACCACCCTTGAGCATCT
GGGCAAGACCCGCTTTGACTGTAAAAGTTCCCACAGCCCCATTTCCGTTC
TCATTGGCGTTATCGCTCATTTTTAA
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