mRNA_H-akashiwo_Contig84.51.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig84.51.1
Unique NamemRNA_H-akashiwo_Contig84.51.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: UPI000D1CC43C (DNA repair protein REV1 isoform X1 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC43C)

HSP 1 Score: 446 bits (1146), Expect = 2.730e-141
Identity = 295/702 (42.02%), Postives = 405/702 (57.69%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSS-GSGPESSI-------FHNVVVHVNGLTNPPQHELRRLINQHGGQMDGY-ETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGLHRSQESVLKSKHTT----RTGKSNLPDQ--VSLPPPD----NASGDWAGKHFSLDEENLEG--ECFNNESNKDGHGETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQRWTGVDLGALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELTPTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPLEGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAAEPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGD-LGQWLVKTTAPDPAPAQQGTASKDDSADEHDPNTFSQMDPTVFESLPNDIQEELVSA 2040
            G FG Y ++K++KL  QF  +AS   +  G+  E SI       F  + +HVNG T P   ELR L+ +HGG  + Y   +RVTH IC+NLP +K KE R   K   V+   W+V+SI    LL  A + +  ++ S +S L S + T    + G  N+ +Q  V+    D    N +GD AGK    DE++ EG  E  N E   DG  E    E  R +S   LDDP+ F++ +FK+SRLH IG W+  YQ     ++R T      L  A E++I+HVDMDCFFVSVV R RP+L+GKPV V HS    G+ E+SS NY AR  GVKAGMF++TAK+ CP L ++ YDF+ YE+V+D++Y++    +PLVQA SCDEAYL +S      G  A +A  +R  I   T C ASAGI  +ILLARLATK+AKPNGQ ++    A  ++  LP  ELPGVGW L  +L A  L TC DL       LR+ +G +TG  L   ARG D R ++    +KS+GA+VN+G+RF+  A+ + FL  L  EV  RL +  V  R  T+KVKK++ GA EP KFMG G CDN+SRS T          L  + R+L+  L +   + RG+G+  ++L  L   +  +E   L  W+  T +PD    +Q T SK D + E +    S++DP   ESLP ++ +EL +A
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEAPRGNADEKSIEEITSKIFEGISIHVNGFTIPSHQELRTLMLRHGGNFENYFSKTRVTHIICSNLPQSKIKEFRSFSKGLPVLKPGWIVDSIAVGKLLPWASYQLEAIY-SNQSTLSSFYGTLKLLQDGTENVEEQELVAEAKADTSHQNLAGDGAGKEIEYDEQDEEGGAEEVNVE---DGLSENEYMEHRRSHST--LDDPN-FVQNYFKYSRLHFIGTWRNRYQATVQMQRRVT------LDPALEKSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSDSSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRHSPLVQAISCDEAYLDVSGM----GDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNGQFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGAEVNWGVRFSTPADAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKTGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRLEDLSNEQGAKEQTRLESWI--TNSPDKR-LEQRTDSKPDRSIEPELPPASEIDPCFLESLPPELFDELNNA 722          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: D8SFY4_SELML (DNA polymerase kappa n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SFY4_SELML)

HSP 1 Score: 432 bits (1111), Expect = 7.360e-134
Identity = 294/702 (41.88%), Postives = 398/702 (56.70%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSS-GSGPESSI-------FHNVVVHVNGLTNPPQHELRRLINQHGGQMDGY-ETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGLHRSQESVLKSKHTTRT----GKSNLPDQ--VSLPPPD----NASGDWAGKHFSLDEENLEG--ECFNNESNKDGHGETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQRWTGVDLGALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELTPTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPLEGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAAEPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGD-LGQWLVKTTAPDPAPAQQGTASKDDSADEHDPNTFSQMDPTVFESLPNDIQEELVSA 2040
            G FG Y ++K++KL  QF  +AS   +S G+  E+SI       F  + +HVNG T P   ELR L+ +HGG  + Y   +RVTH IC+NLP +K KE R   K   V+   W+V+SI    LL  A + +  ++ S +S L S + TR     G  N+ +Q  V+   PD    N +GD AGK    DE++ EG  E  N E   DG  E    E  R +S   LDDP+ F++ +FK+SRLH IG W+  YQ     ++R T      L  A E++I+HVDMDCFFVSVV R RP+L+GKPV V HS    G+ E+SS NY AR  GVKAGMF++TAK+ CP L ++ YDF+ YE+V+D++Y++    +PLVQA SCDEAYL +S      G  A +A  +R  I   T C ASAGI  +ILLARLATK+AKPNGQ ++    A  ++  LP  ELPGVGW L  +L A  L TC DL       LR+ +G +TG  L   ARG D R ++    +KS+GA            E + FL  L  EV  RL +  V  R  T+KVKK++ GA EP KFMG G CDN+SRS T          L  + R+L+  L +   + RG+G+  ++L  L   +  +E   L  W+  T +PD    +Q T SK D + E +    S++DP   ESLP D+ +EL +A
Sbjct:   41 GDFGRYMTNKVRKLGEQFQAEASNPEASRGNADENSIEETTSKIFEGISIHVNGFTIPSHQELRTLMLRHGGTFENYFSKTRVTHIICSNLPQSKIKEFRSFSKGLPVLKPGWIVDSIAVGKLLPWASYQLEAIY-SNQSTLSSFYGTRKLLQDGTENVEEQELVAEAKPDTSHPNLAGDGAGKEIEYDEQDEEGGAEEVNVE---DGLSENEYMEHRRSHST--LDDPN-FVQNYFKYSRLHFIGTWRNRYQATVQMQRRVT------LDPALEKSIIHVDMDCFFVSVVTRNRPELDGKPVGVCHSDSSKGTGEISSANYEARTFGVKAGMFVKTAKKCCPNLEIVSYDFEGYEQVADKLYEILHRHSPLVQAISCDEAYLDVSGM----GDPASIASAIRREIFEATRCTASAGISANILLARLATKKAKPNGQFQIHLQEAEEFMMNLPVEELPGVGWVLREKLHALKLFTCSDLRLLTSETLRKHFGAKTGETLYNHARGIDHRKVQAPQEKKSIGA------------EAQNFLVTLSEEVASRLRKAAVHGRTFTMKVKKRKSGAGEPEKFMGCGICDNISRSTTLPSGTNSSDVLSRISRQLFGSLNLDVRDVRGVGLQVTRLEDLSNEQGAKEQTRLESWI--TNSPDKR-LKQRTDSKPDRSIEPELPPASEIDPCFLESLPPDLFDELNNA 710          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: A0A225X3Z8_9STRA (DNA repair protein REV1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3Z8_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 6.100e-128
Identity = 289/709 (40.76%), Postives = 408/709 (57.55%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGL-HRSQESVLKSKHTTRTGKSNLPDQVSLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGH-----GETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQ-RWTGVDLG-ALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELT-PTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPLEGAAP--RKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAA-EPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGDLGQ-WL---VKTTAPDPAPAQQGTASKDD----SADEHDPNT---------FSQMDPTVFESLPNDIQEELVSA 2040
            GSFG Y SHKIQKL+ Q     ++  +S +G  S++F NV V+V+G T P + E+R+L+  HGG  + YET+RVTH I  +LP +K  +L+K +KP  VV   W+V+S++ K LL    FL  G    +QES+     +  +GK + P  V        + D A KH  ++ E L+     ++S+ +        E +    S+  +    D P+ F+  FF  SRLHHIG W+  +Q++AA  Q ++ G  +  A   + +R ILHVDMDCFFV+V VRGR +LE  PVAVAHSG+ G SSE+SSCNY ARAKGV AGMFMQTAK+LCPELVVLPY F   E VS +IYD+FF   P VQA SCDEA+L+     +    G E+A+ +R  I  +TGCPAS G+  ++LLA+L++K+AKP+G  ++  P+ A  ++  L   +LPGVG+K   + EA G+     L  +   +L Q  G+  G +L   ARG D R L  A+   RKSV A VN+G+RF    +   FL  L  E+  RL    V A+ +TL +KK+  GA  EP+KFMGHG CDN S+S   A P  D   +  V   L   +    EE RG+G+  +KLV    + N R G L + WL   V+ +       Q+  +  ++    + DE  PNT          SQ+D  V E LP+ +Q+E++++
Sbjct:   19 GSFGVYMSHKIQKLRGQ-----NESFASPNGV-SALFQNVHVYVDGYTIPSKEEIRQLMLLHGGGFEHYETNRVTHVIATHLPASKLLQLKKAKKPLPVVHPDWIVQSVEQKKLLPLQSFLYAGFADPTQESIFSL--SLSSGKDS-PVVVET----KRAADHASKHSDMEIEELDILAEEDDSDLEDPPVSLLAEMNNAASSKLRTNSTKDGPE-FVRHFFAKSRLHHIGTWRTTFQQKAAEFQAKYKGAPVTRAPVKSSDRVILHVDMDCFFVAVAVRGRNELEKVPVAVAHSGNAG-SSEISSCNYMARAKGVGAGMFMQTAKELCPELVVLPYQFDAIERVSFQIYDIFFSHTPYVQAVSCDEAFLEFGKGTN----GLEMAKSIRQEIFEQTGCPASVGVSFNVLLAKLSSKKAKPDGIYQIADPSQAEEFVLSLKIRDLPGVGYKTGVKFEALGVEDVCQLVLKSKGELVQALGKVAGEMLYNYARGIDTRRLSMASNMMRKSVSAVVNFGIRFENWEDATVFLIALGEELSHRLRNLKVQAKCLTLLIKKRAEGAPIEPSKFMGHGICDNFSKSQVLAQPTDDEVVIGKVCIELLRQMNFPSEELRGVGVQATKLVSDTPSANQRSGQLFKAWLQDSVQQSGNGTLANQEHESEPENDEMKTEDEQRPNTNRREFAATTLSQIDMGVLEELPDKLQQEILAS 708          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: A0A6A3K076_9STRA (DNA repair protein REV1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K076_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 1.330e-126
Identity = 279/720 (38.75%), Postives = 400/720 (55.56%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGL-HRSQESVLKSKHTTRTGKSNLPDQVSLP-----PPDNASGDWAGKHF----SLDEENLEGECFNNESNK-----DGHGETHEEE-------CSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQ-RWTGVDLGALRAAH-ERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQREL-TPTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPL--EGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAA-EPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGDLGQWLVKTTAPDPAPAQQGTASKDDSAD--------------EHDPNTFSQMDPTVFESLPNDIQEELV 2034
            GSFG Y SHKIQKL+ Q        V+ G+     +F +V V+V+G T P + ++RRL+  HGG  + Y+T RVTH I  +LP +K  +L++ RKP  VV   W+V+SI+   LL   PFL  G    +Q S+     +     S+ P+ V++       P   + D A KH       + +N E +  +N  ++     DG    ++          S+  +    D P+ F+  FF  SRLHHIG W+  +Q++AA  Q ++ G  +  + A+  +R ILHVDMDCFFV+V VRGRP+L   PVAVAHSG+ G SSE+SSCNY ARAKG+ AGMFMQTAK+LCPELVVLPY F   + VS +IYD+FF   P VQA SCDEA+L+     +    G E A+ +R +I  +TGCPAS G+  ++LLA+L +K+AKP+G  ++   + A  ++  L   +LPGVG+K   +L+  G+   G + +    +L Q  G+ +G +L   ARG D RPL  E    RKSV A VN+G+RF +  +   FL  L  E+  RL    V  +++TL +KK+R GA  EP+KFMGHG CDN S+S   +    D   +      L        EE RG+G+  +KLV    + N + G L Q  +K +       QQ T S + S +              + D  TFSQ++  V E LP  +++E++
Sbjct:   20 GSFGVYMSHKIQKLRSQ----NESAVTPGTASTGGLFRDVHVYVDGYTVPSKEDIRRLMLLHGGGFEHYDTGRVTHIIATHLPASKLLQLKRARKPLPVVHPDWIVQSIEQLKLLPVQPFLYSGFADPTQSSIFNLSGSMSAKGSDSPEGVAVELEDKRAPSAGATDPASKHAISTAESENDNSEPDILDNIEDEXXXXXDGLDMPNDPPPVQPAGATSKLRTNSTRDGPE-FVRHFFAKSRLHHIGTWRATFQQKAAEFQAKYKGGPVTRVPASSGDRVILHVDMDCFFVAVAVRGRPELLKVPVAVAHSGNAG-SSEISSCNYLARAKGIGAGMFMQTAKELCPELVVLPYQFDAIQRVSFQIYDIFFSHTPYVQAVSCDEAFLEFGKGTN----GMEKAKLIRQQIFEQTGCPASVGVSFNVLLAKLCSKKAKPDGMYQIGDQSQAEEFMLSLKVGDLPGVGYKTGTKLDDLGIEDVGQVLSLTKGELVQSLGKASGEMLFNYARGIDLRPLSMESNMMRKSVSAVVNFGIRFEKWEDATVFLMALGEELSHRLRNLKVRTKSLTLLIKKRREGAPIEPSKFMGHGVCDNFSKSQVLSQATDDEVVIGKACIELLRQFNFPSEELRGVGVQATKLVSDAPSGNQKSGQLFQAWLKDSGSGSTVQQQQTMSDEVSQETKMEEEPRSSTGRHDFDGTTFSQINMDVLEELPEQLRQEIL 729          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: W7TVM9_9STRA (DNA repair protein REV1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVM9_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 3.500e-124
Identity = 275/655 (41.98%), Postives = 362/655 (55.27%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELR--KLRKPPI----VVTASWVVESIKAKTLLSTAPFLVGGLHRSQESVLKSKHTTRTGKSNLPDQVSLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGHGETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQ---------KRAANRQRWTGVDLGALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGG---GSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVA-RRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRE-LTPTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPLEGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAAEPAKFMGHGACDNLSRSFTFAGPVADGPG-LYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPRE---GDLGQWLVKT 1893
            G FG Y  HKIQ+L  Q  + + +       P S IF  +V  +NG T  P  ELR L+++HGG +  YETS VTH +C NLP AK K+ R  KL +       V+   +++ SI+    L  A FLV G+       +++    R G        S                      L G   +  +     G           S  + +DPD FI+ +FK SRLH IG ++   Q         +RAA   + +      +R    R I+HVDMDC+FVS +VR RP+L GKPVAVAH G G     SSE+SSCNYPARA GV+AGMF+  A++LCP L VL YDF++YE VS  +Y +FFE A +VQ  SCDEAYL+L     AAG   E A RR+R R++  T CPASAG+G ++LLARLATK AKPNG    L    +  +L  LP  E+PGVGW+   +LE RGLRTCG L   R   L+ W G +TG++L    RG+D RP+     RKSVGA+VN+G+RF++  +VE F+ +L  EV +RL +  V AR +T K+K+ + G  EP K +G G CDNLSRS   A P  DGP  +  V  RL A L V P   RG+GI  S L+   +A  P +   G +  WL KT
Sbjct:   20 GDFGVYMQHKIQRLHAQLNEKSGE----EDVPISRIFEGMVFFINGFTPLPVEELRALVHEHGGHVAAYETSNVTHILCTNLPHAKLKQRRAQKLARGAHQQLPVIHPDYILASIEQGRRLPPADFLVDGVKYHHGQGIQAFMPRRCGDGGARRAASA---------------------LHGPALDLTTALATEGTAFAVPADTPVSNDDAEDPD-FIKKYFKSSRLHFIGSFRARMQDLAAEHARARRAARAVQSSEAGESNMRHCQRRLIMHVDMDCYFVSALVRDRPELAGKPVAVAH-GEGQERHSSSEISSCNYPARATGVRAGMFVGEAQRLCPGLKVLHYDFEVYERVSRAMYQIFFEEAEVVQPVSCDEAYLEL-----AAGTDPEAAARRVRRRLMEATRCPASAGVGRNMLLARLATKHAKPNGHHVMLGAEESMVYLENLPVREIPGVGWESDAKLERRGLRTCGQLWEVRLPQLQSWLGPKTGSMLYRACRGQDDRPVVPQTTRKSVGAEVNWGVRFSQEEQVEVFVDRLAVEVAQRLAQAKVQARHLTFKIKRSQYGPNEPEKLLGCGRCDNLSRSVALARPT-DGPADIAAVSLRLLAQLQVPPALIRGLGIQLSNLLVDGQAGVPDKKGAGSMQAWLQKT 641          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: A0A0P1B0E8_PLAHL (DNA repair protein REV1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0E8_PLAHL)

HSP 1 Score: 399 bits (1025), Expect = 1.360e-123
Identity = 282/703 (40.11%), Postives = 392/703 (55.76%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGLHRSQESVLKSKHTTRTGKSNLPDQVSLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGHGETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQ-RWTGVDLG-ALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQ-RELTPTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARP--LEGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAA-EPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGDLGQWLVKTTAPDPA--------PAQQG---------TASKDDSADEHDPNTFSQMDPTVFESLPNDIQEELVSA 2040
            GSFGTY SHKIQKL+ Q    AS   S+ S  ++ IF +V V+V+G T P + ++R+L+  HGG  + Y+T+RVTH I  +LP +K ++L+K +KP  VV   W+++SI+ K LL    FL  G     +S   S HT         DQ   P   N     A +H   DE ++     +   N    G       SR NS    D PD F+  FF  SRLHHIG WK  +Q++AA+ Q ++ G  +  A   +++R ILHVDMDCFFV+V  RGRP+L   PVAVAHS    GSSE+SSCNY ARAKGV AGM+M TAK+ CP+L+VLPY+F   + VS +IY++FF   P VQA SCDEA+L+  +E +    G E A  +R  I  +T C AS G+  ++LLA+L++K+AKPNG  R L    A   +  L   +LPGVG K   +LEA G+ T   LA    + L Q  G+ +G +L + ARG D RP  +E  + RKSV A VN+G+RF +  +   FL  L  E+  RL    V  + +TL +KK+  GA  EP+KFMGHG CDN S+S   A    D   +  +   L        EE RG+G+  +KL+    +   + G L +  +  +A  PA        P   G          A+++ + DE    TFSQ+D  V + LP  +Q E++++
Sbjct:   23 GSFGTYMSHKIQKLRGQNERLASSGASTSSSKQTDIFRDVHVYVDGYTVPSKEDIRQLMLLHGGGFEHYDTNRVTHVIATHLPASKLRQLQKAKKPLPVVHPDWILQSIEQKKLLPVQSFLYTGFTDPTQS---SVHTFTASN----DQTISPA--NEINHDASQHSIDDESDVSIHQPSRTINLSDSGVK-----SRTNST--RDGPD-FVRHFFAKSRLHHIGTWKATFQQQAASFQAKYKGERITRAPLLSNDRIILHVDMDCFFVAVAQRGRPELNNVPVAVAHS-ETAGSSEISSCNYLARAKGVCAGMYMHTAKEKCPDLIVLPYEFDAIQCVSFQIYNIFFSHTPYVQAVSCDEAFLEFGSETN----GLEKAETIRKEIFEQTECIASVGVSYNVLLAKLSSKKAKPNGIFRILDSNQAQELVLSLKVGDLPGVGRKTNAKLEALGVDTVTHLAQMTKSQLVQSLGKASGEMLYDFARGIDLRPVSMESNSMRKSVSAVVNFGIRFEKWQDATTFLMSLGEELSYRLRSLRVRTQCLTLLIKKRSEGAPIEPSKFMGHGICDNFSKSHVLAQATDDQVVIGKICIELLREFNFPCEELRGVGVQATKLISDAPSSKQQGGQLIKAWLDDSAQRPANYASSNSAPTMTGRLSGFSTEENANRNTTTDELAVTTFSQIDKEVLDELPESVQHEILAS 703          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: A0A3M6VGU4_9STRA (DNA repair protein REV1 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGU4_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 2.720e-123
Identity = 291/740 (39.32%), Postives = 401/740 (54.19%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKLQHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGL---------HRSQESVLKSKHTTRTGKSNLPDQVSLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGHGETHE-----------------EECSRENSA-------GNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAAN-RQRWTGVDLG-ALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELT-PTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPL--EGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGA-AEPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGDLGQ-WLVKTTAPDPA--PAQQG----TASKD-----DSADEHDPN---------TFSQMDPTVFESLPNDIQEELVSA 2040
            G F  Y SHKIQKL+ Q   + S + +S  G    IF  V V+V+G T P + E+RRL+  HGG  + YET+RVTH I  +LP +K   L+K RKP  +V  +W+V SI+ K LL    F   G          H S  + L S   T      + +++    P           + ++   +E +  + E  +D HG + E                 EEC + +SA          D P+ F++ FF  SRLHHIG W+  +Q++AA    ++ G  +  AL ++++R +LHVDMDCFFV+V VRGRP LE  PVAVAHSG+ G SSE+SSCNY ARAKGV AGMFMQTAK+LCP+LVVLPY F   + VS +IYD+FF   P VQA SCDEA+L+   E      G  +A+ +R  I  +TGC AS G+  +ILLA+L++++AKP+G  +++ P  AA ++  L   +LPG G K   +LEA G+     L +    +L Q  G+  G +L   ARGRD RPL  E    RKSV A VN+G+RF        FL  L  E+  RL    V  + VTL +KK+  GA  EP+KFMGHG CDN S+S   A    D   +  +   L        EE RG+G+  +KLV   ++ N R G L + WL  +  P PA  P+       TAS+       + DE + N         TFSQ+D  V E LP  ++ E++++
Sbjct:   20 GEFSVYMSHKIQKLRAQ---NDSIVSASLDGKVVDIFRGVCVYVDGYTVPSKEEIRRLMLLHGGTFEHYETNRVTHIIATHLPASKLLLLKKARKPLPLVHPNWIVRSIEQKQLLPVQQFQSKGFVDPTQCTISHLSGSNSLSSPLETNDSTFEVKNKLVHGIPSVLDATALTPKYDVNA--IEADTGDEE--EDSHGFSGEKNGLNALKDPFLVSPVLEECEKTSSAPDKLQTTSTRDGPE-FVKHFFAKSRLHHIGTWRSTFQQKAAEFLAKYKGGQVTRALASSNDRVMLHVDMDCFFVAVAVRGRPQLEKVPVAVAHSGNAG-SSEISSCNYLARAKGVGAGMFMQTAKELCPDLVVLPYQFDAIQRVSFQIYDIFFSHTPFVQAVSCDEAFLEFGKETD----GMAMAKTIRQEIFEQTGCAASVGVSFNILLAKLSSQKAKPDGIYQVSDPDQAATFMLSLNIRDLPGAGVKTRAKLEALGVEDVRQLVSMTKGELVQSVGKAPGEMLYNYARGRDIRPLSMESNMMRKSVSAVVNFGIRFENWENATVFLSALGEELSHRLRNLKVRTQCVTLLIKKRAEGAPVEPSKFMGHGVCDNFSKSHVLAEATDDQVVIGKICIELLRRFNFLSEELRGVGVQATKLVSHTQSVNKRSGQLFKAWLTDSAQP-PAILPSSHSPRVPTASEQVERERKTKDELEGNVNRNDFTATTFSQIDTGVLEELPEQLKREILAS 745          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: A0A833VNP0_9POAL (DNA repair protein REV1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VNP0_9POAL)

HSP 1 Score: 394 bits (1011), Expect = 3.990e-121
Identity = 266/670 (39.70%), Postives = 367/670 (54.78%), Query Frame = 1
Query:    7 FGTYFSHKIQKLQHQFIDDAS--------QIVSSG-SGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSR-VTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGLHRSQES--------VLKSKHTTRTGKSNLPDQVSLPPPDNASGDWAGKHFSL-----DEENLEGECFN-NESNKDGHGETHEEECSR----ENSAGNLD-------DPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQRWTGVDLGALRAAHE---RTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQ--LSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELTPTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPLEGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAAEPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREG----DLGQWL 1884
            FG+Y + K +KL  QF  DAS        +I   G  G +  IF  V + V+G T P   EL+  + +HGG+   Y +   V+H IC+NLPD+K+K LR   +   VV   W+V+SI A TLLS  P+ +   H S ES            K  +R+       +     PD   G+     FS+      E++ E +  N N   KD   E+ E++CS     + S+G  D       DPD F+E +FK+SRLH IG W+  Y+KR +N    TG     L +  E   R ++HVDMDCFFVSVV+R  P+L  KPVAV HS +  G++E+SS NYPAR+ G+KAGMF++ AK  CP L + PYDF  YEEV+D+ Y +  +    V+A SCDEA+L+  LS  D+       +A  +R  I   T C ASAGIG ++LLARLATK AKPNGQ  + P     +L  LP + LPGVG+  A +L  R + TC  L       L++  G + G +L    RG D   +E     KS+GA+VN+G+RF +  + E FL  LC EV  RL   GV  R +TLKVK ++ GA EP K+MG G C+ +SRS T  G + D   L+ +V+  +A   +  +E RG+G+   KL  L+ A + R+G     L  WL
Sbjct:   37 FGSYMTEKNRKLNDQFETDASSSSYGANPEITDGGVGGGDGGIFKGVSIFVDGFTVPSSQELKNYMLKHGGRFINYFSRHTVSHIICSNLPDSKRKNLRAFSQGLPVVKPDWIVDSIAANTLLSWVPYQLIE-HASTESSKQLKLFAFFSEKGVSRSNYQGTLIETEAFLPDECKGESTKPTFSVTDNSSQEKSQESKRTNTNNELKDVKSES-EDDCSTSYVADQSSGRPDRPHSTLTDPD-FVENYFKYSRLHFIGTWRNRYRKRFSNFISGTGSKNNNLNSNMESLKRIVIHVDMDCFFVSVVIRNSPELLDKPVAVCHSNNPKGTAEISSANYPARSYGIKAGMFVRDAKARCPHLTIFPYDFSAYEEVADQFYGILHKHCEKVKAVSCDEAFLEMFLSLNDYPES----IAEMIRKEIYETTRCTASAGIGENMLLARLATKSAKPNGQCFIPPDKVDEYLDKLPVSALPGVGYNAAEKLRTREVETCAQLRTISKDILQKDLGSKMGEMLWNYCRGIDHSEVEAVQETKSIGAEVNWGVRFKDGRDSENFLMNLCKEVSLRLQGCGVQGRTITLKVKVRKKGAGEPVKYMGCGDCETISRSLTVPGAINDVASLHRIVKPTFASFHLDVKEVRGVGL---KLSRLELANSSRKGVEESRLDFWL 696          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: D0NDK9_PHYIT (DNA repair protein REV1 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NDK9_PHYIT)

HSP 1 Score: 392 bits (1006), Expect = 9.520e-121
Identity = 279/710 (39.30%), Postives = 382/710 (53.80%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKL--QHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGGL-HRSQESV--LKSKHTTRTGKSNLP-------DQVSLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGHGETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQRWT--GVDLGALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELT-PTAAAAWLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPL--EGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAA-EPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGDLGQWLVKTTAPDPAPAQQGTASKDDSAD-----EHDPNT-------FSQMDPTVFESLPNDIQEELVSA 2040
            GSFG Y SHK+QKL  Q++    A+    + SG +S IF  + V+V+G T P + E+R+L+  HGG  + Y+T RVTH +  +LP +K  +L+K RKP  VV   W+V+SI+   LL    FL  G    +Q S+  L    T    K++         D  + PPP         K+ S     L        S KDG                    PD F+  FF  SRLHHIG W+  +Q++AA  Q     G    A   + +R ILHVDMDCFFV+V VR +P+L+  PVAVAHS + G SSE+SSCNY ARAKGV AGMFMQTAK+LCPEL+VLPY F   + VS +IYD+FF   P VQA SCDEA+L+         +G E A  +R  I  +TGCPAS G+  +ILLA+L++K+AKP+G   ++ P+ A  ++  L   +LPG G   A +LEA G+     L +    +L Q  G+  G  L   ARG D RPL  E    RKSV A VN+G+RF +  +   FL  L  E+  RL    V  + +TL +KK+  GA  EP+KFMGHG CDN S+S   A P  D   +      L   L    E+ RG+G+  +KL+    ++ P +   GQ L K    D A     T+S  +  +     E++ +T       FSQ++  V E LP  +Q E++++
Sbjct:   21 GSFGVYMSHKVQKLRNQNESFTAAASPDRAPSGSKSGIFQGIHVYVDGYTKPSKEEIRQLMLLHGGGFEHYDTGRVTHLVATHLPASKLLQLQKARKPLPVVHPDWIVQSIEQNKLLPIQSFLYAGFTDPTQNSIFSLSGSATQAEDKASSDAVFDVQEDPPAFPPP--------SKNCSTTSLKLR-----TNSTKDG--------------------PD-FVRHFFAKSRLHHIGTWRATFQQKAAEFQAQYKGGPVTRASATSSDRVILHVDMDCFFVAVAVRDKPELQDVPVAVAHSSNAG-SSEISSCNYSARAKGVGAGMFMQTAKELCPELIVLPYQFDDIQRVSFQIYDIFFSHTPYVQAVSCDEAFLEFEKGT----KGMEKANAIRQEIFEQTGCPASVGVSFNILLAKLSSKKAKPDGVYAISDPSQAKEFMLQLKVRDLPGAGHMTAAKLEALGVEDARQLVSMTRTELVQSLGKAAGERLFNYARGVDMRPLSMESNMMRKSVSAVVNFGIRFDKWEDATVFLMALGEELSHRLRNLKVRTKCLTLLIKKRAEGAPIEPSKFMGHGVCDNFSKSQILAQPTDDEVVIGKACIELLRQLNFPSEDLRGVGVQATKLI----SDAPSKKKSGQ-LFKAWLEDSAQQSGDTSSMQEPEECEAKTENEQSTSDFAVTRFSQINMGVLEELPEQLQREILAS 686          
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Match: A0A329RWE9_9STRA (DNA repair protein REV1 n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RWE9_9STRA)

HSP 1 Score: 389 bits (999), Expect = 7.890e-120
Identity = 272/705 (38.58%), Postives = 380/705 (53.90%), Query Frame = 1
Query:    1 GSFGTYFSHKIQKL--QHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNPPQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVVTASWVVESIKAKTLLSTAPFLVGG-LHRSQESVLKSKHTTRTGKSNLPDQVSLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGHGETHEEECSRENSAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQ-RWTGVDLG-ALRAAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCNYPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAPLVQAQSCDEAYLQLSAEDHAAGRGA---EVARRLRARILAETGCPASAGIGPSILLARLATKQAKPNGQRELTPTAAAA-WLAPLPAAELPGVGWKLARRLEARGLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPL--EGAAPRKSVGADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPGAA-EPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEETRGIGISGSKLVPLKKAENPREGDLGQ-WLVKTT-----APDPAPAQQGTASKDDSADEHDPNT-------FSQMDPTVFESLPNDIQEELVSA 2040
            GSFG Y SHK+QKL  Q++    A+    + SG  + IF  + V+V+G T P + E+R+L+  HGG  + YET RVTH +  +LP +K  +L+K RKP  VV   W+V+SI+   LL    FL  G +  +Q S+     +     + + D+ S      AS                                     + +    +  D   F+  FF  SRLHHIG W+  +Q++AA  Q ++ G  +  A  ++ +R ILHVDMDCFFV+V  RG+P+L   PVAVAHSG+ G SSE+SSCNY ARAKGV AGMFMQTAK+LCPEL+VLPY F   E VS +IYD+FF   P VQA SCDEA+L+        GRG    E A  +R +I  +TGC AS G+  ++LLA+L++K+AKP+G  ++  ++ A  ++  L   +LPG G     +LEA G+     L +    +L Q  G+ +G +L   ARG D RPL  E    RKSV A VN+G+RF +  +V  FL  L  E+  RL    V  + +TL +KK+  GA  EP+KFMGHG CDN S+S   A P  D   +      L        EE RG+G+  +KL+      N R G L + WL  +T     A    P Q+   +K +     D NT       FSQ++  V E LP  +Q+E++++
Sbjct:   23 GSFGLYMSHKVQKLRGQNESFTAAASPDRASSGNNAGIFQGIHVYVDGYTVPSKEEIRQLMLLHGGGFEHYETGRVTHIVATHLPASKLLQLKKARKPLPVVHPDWIVQSIEQNKLLPVQSFLYAGFIDPTQNSIFSLPGSGLVSPAQVEDKRSSYAA--ASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTLKLRTNSTRDGPEFVRHFFAKSRLHHIGTWRATFQQKAAEFQAKYKGGPINRAPASSSDRVILHVDMDCFFVAVAARGKPELHKVPVAVAHSGNAG-SSEISSCNYLARAKGVGAGMFMQTAKELCPELIVLPYQFDAIERVSFQIYDIFFSHTPYVQAVSCDEAFLEF-------GRGMNGMEKANTIRKKIFEQTGCSASVGVSFNVLLAKLSSKKAKPDGIFQIADSSQAEEFMLQLKIRDLPGAGHMTGAKLEALGVEDVPRLVSITRGELVQSLGKASGEMLYNYARGIDLRPLSMESNMMRKSVSAVVNFGIRFEKWEDVTVFLMALGEELSHRLRNLKVRTKCLTLLIKKRAEGAPIEPSKFMGHGVCDNFSKSHFIAQPTDDEVVIGKACIELLRQFNFPSEELRGVGVQATKLISDAPGSNQRSGQLFKAWLNDSTQQSGNAASLNPQQEECEAKTEDEPHTDRNTNEFPATSFSQINMGVLEELPEQLQQEILAS 717          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig84.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000D1CC43C2.730e-14142.02DNA repair protein REV1 isoform X1 n=4 Tax=Selagin... [more]
D8SFY4_SELML7.360e-13441.88DNA polymerase kappa n=3 Tax=Selaginella moellendo... [more]
A0A225X3Z8_9STRA6.100e-12840.76DNA repair protein REV1 n=1 Tax=Phytophthora megak... [more]
A0A6A3K076_9STRA1.330e-12638.75DNA repair protein REV1 n=4 Tax=Phytophthora TaxID... [more]
W7TVM9_9STRA3.500e-12441.98DNA repair protein REV1 n=2 Tax=Monodopsidaceae Ta... [more]
A0A0P1B0E8_PLAHL1.360e-12340.11DNA repair protein REV1 n=1 Tax=Plasmopara halsted... [more]
A0A3M6VGU4_9STRA2.720e-12339.32DNA repair protein REV1 n=1 Tax=Peronospora effusa... [more]
A0A833VNP0_9POAL3.990e-12139.70DNA repair protein REV1 n=1 Tax=Carex littledalei ... [more]
D0NDK9_PHYIT9.520e-12139.30DNA repair protein REV1 n=2 Tax=Phytophthora infes... [more]
A0A329RWE9_9STRA7.890e-12038.58DNA repair protein REV1 n=1 Tax=Phytophthora cacto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig84contigH-akashiwo_Contig84:1747982..1750684 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog88036.EFJ16487
PFAMsBRCT_2,IMS,IMS_C,IMS_HHH,LIG3_BRCT
Model size2040
Max annot lvl35493|Streptophyta
KEGG koko:K03515
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0000731,GO:0002200,GO:0002206,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002565,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010224,GO:0016043,GO:0016444,GO:0016445,GO:0016740,GO:0016772,GO:0016779,GO:0017125,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032042,GO:0032501,GO:0032502,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035822,GO:0035861,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043504,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048731,GO:0048856,GO:0050896,GO:0051716,GO:0070013,GO:0070987,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090734,GO:0140097,GO:1901360,GO:1901362,GO:1901576
Exons4
Evalue1.21e-134
EggNOG OGsCOG0389@1|root,KOG2093@2759|Eukaryota,37SKB@33090|Viridiplantae,3G7WE@35493|Streptophyta
DescriptionDeoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents
Cds size2040
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388007.8275032-CDS-H-akashiwo_Contig84:1747981..17480551681388007.8275032-CDS-H-akashiwo_Contig84:1747981..1748055Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 1747982..1748055 -
1681388007.8391438-CDS-H-akashiwo_Contig84:1748589..17499401681388007.8391438-CDS-H-akashiwo_Contig84:1748589..1749940Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 1748590..1749940 -
1681388007.848966-CDS-H-akashiwo_Contig84:1750021..17502581681388007.848966-CDS-H-akashiwo_Contig84:1750021..1750258Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 1750022..1750258 -
1681388007.8607988-CDS-H-akashiwo_Contig84:1750306..17506841681388007.8607988-CDS-H-akashiwo_Contig84:1750306..1750684Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 1750307..1750684 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig84.51.1prot_H-akashiwo_Contig84.51.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig84 1747982..1750684 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig84.51.1

>prot_H-akashiwo_Contig84.51.1 ID=prot_H-akashiwo_Contig84.51.1|Name=mRNA_H-akashiwo_Contig84.51.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=680bp
GSFGTYFSHKIQKLQHQFIDDASQIVSSGSGPESSIFHNVVVHVNGLTNP
PQHELRRLINQHGGQMDGYETSRVTHYICNNLPDAKKKELRKLRKPPIVV
TASWVVESIKAKTLLSTAPFLVGGLHRSQESVLKSKHTTRTGKSNLPDQV
SLPPPDNASGDWAGKHFSLDEENLEGECFNNESNKDGHGETHEEECSREN
SAGNLDDPDGFIETFFKWSRLHHIGHWKMHYQKRAANRQRWTGVDLGALR
AAHERTILHVDMDCFFVSVVVRGRPDLEGKPVAVAHSGHGGGSSEVSSCN
YPARAKGVKAGMFMQTAKQLCPELVVLPYDFKLYEEVSDRIYDLFFETAP
LVQAQSCDEAYLQLSAEDHAAGRGAEVARRLRARILAETGCPASAGIGPS
ILLARLATKQAKPNGQRELTPTAAAAWLAPLPAAELPGVGWKLARRLEAR
GLRTCGDLAAQRPADLRQWYGERTGALLAEMARGRDARPLEGAAPRKSVG
ADVNYGMRFTERAEVERFLRQLCAEVGRRLVENGVAARAVTLKVKKKRPG
AAEPAKFMGHGACDNLSRSFTFAGPVADGPGLYPVVRRLYAGLGVTPEET
RGIGISGSKLVPLKKAENPREGDLGQWLVKTTAPDPAPAQQGTASKDDSA
DEHDPNTFSQMDPTVFESLPNDIQEELVSA
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mRNA from alignment at H-akashiwo_Contig84:1747982..1750684-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig84.51.1 ID=mRNA_H-akashiwo_Contig84.51.1|Name=mRNA_H-akashiwo_Contig84.51.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2703bp|location=Sequence derived from alignment at H-akashiwo_Contig84:1747982..1750684- (Heterosigma akashiwo CCMP452)
GGGAGTTTTGGGACCTATTTTTCCCACAAAATCCAAAAACTTCAACACCA ATTTATTGATGATGCTTCACAAATAGTGAGCAGTGGGTCGGGGCCAGAGT CTAGTATTTTTCACAACGTAGTTGTTCACGTGAATGGTCTAACCAATCCT CCCCAGCATGAGCTTCGTCGTCTCATTAATCAGCATGGTGGGCAAATGGA TGGCTACGAAACCTCTCGTGTGACACACTACATTTGCAATAACTTGCCAG ACGCAAAGAAGAAAGAGCTTAGAAAGCTGCGAAAACCGCCTATTGTGGTC ACAGCAAGTTGGGTTGTTGAGTCTATAAAAGCAAAGACCCTTTTATCAAC GGCCCCCTTTTTGGTAGGTGGTCTGCATGTGCCAGACAAGCTGAGATTGA CTTCCCACTTCACACAAAAGTCGCAGAGGTCTCAGGAGTCAGTTTTAAAG AGCAAGCATACAACAAGAACTGGGAAGTCAAATCTGCCAGATCAAGTCAG TCTTCCACCACCAGATAATGCCAGTGGTGACTGGGCGGGAAAACATTTTA GTTTGGACGAAGAAAATTTGGAGGGAGAATGCTTCAACAATGAGAGCAAC AAGGATGGACATGGAGAAACTCATGAAGAAGAATGCTCTAGGGAAAACTC TGCTGGGAATCTGGTGGCTCTGGAAACTTCGCCCTCTAAAGAGTGGGCGC CAAGCAAGGCCGACTTCTATCGTGGCCCAATGCGCTCTACAAAGGACGAC CCAGACGGTTTCATCGAGACCTTCTTCAAGTGGTCCAGGCTGCACCACAT CGGCCATTGGAAGATGCACTACCAAAAGCGTGCAGCCAACCGTCAGAGGT GGACTGGGGTTGATCTAGGCGCGCTCCGGGCAGCCCACGAGCGGACAATC CTCCATGTAGACATGGACTGCTTCTTCGTGTCCGTGGTTGTCCGTGGTCG ACCGGACCTGGAAGGGAAGCCGGTGGCGGTGGCCCACTCAGGCCATGGCG GGGGCTCCAGCGAGGTCAGCTCGTGTAACTACCCCGCTCGAGCGAAGGGC GTGAAGGCCGGCATGTTCATGCAGACGGCCAAGCAGCTCTGCCCAGAGCT GGTGGTGCTCCCTTACGACTTCAAGCTGTACGAGGAGGTCTCGGACCGGA TCTACGACCTCTTCTTCGAGACGGCGCCCCTGGTGCAGGCGCAGTCCTGC GACGAGGCCTACCTGCAGCTGAGCGCCGAGGACCACGCGGCCGGGCGCGG CGCCGAGGTCGCGCGGCGGCTGCGGGCGCGCATCCTGGCGGAGACGGGCT GCCCGGCCAGCGCGGGCATCGGGCCAAGCATCCTGCTCGCCCGGCTGGCC ACCAAGCAGGCCAAGCCGAACGGGCAGCGCGAGCTGACGCCGACCGCGGC CGCGGCGTGGCTGGCCCCGCTGCCGGCCGCCGAGCTGCCGGGCGTGGGCT GGAAGCTGGCGCGGCGGCTGGAGGCCCGCGGGCTGCGCACGTGCGGGGAC CTCGCGGCCCAGCGGCCGGCGGACCTGCGGCAGTGGTACGGGGAGCGGAC GGGCGCGCTGCTGGCCGAGATGGCCCGCGGCCGCGACGCCCGCCCGCTGG AGGGCGCGGCCCCCCGGAAGAGCGTGGGCGCGGACGTGAACTACGGCATG CGGTTCACGGAGCGGGCTGAGGTGGAGCGCTTCCTGCGGCAGCTGTGCGC GGAGGTGGGCCGGCGGCTGGTGGAGAACGGGGTGGCGGCGCGGGCCGTCA CGCTGAAGGTGAAGAAGAAGCGGCCGGGCGCGGCCGAGCCGGCCAAGTTC ATGGGCCACGGGGCCTGCGACAACCTGTCGCGGAGCTTCACGTTTGCCGG GCCGGTGGCCGACGGGCCGGGGTTGTACCCGGTGGTGCGGCGGCTGTATG CAGGCCTGGGGGTCACGCCCGAGGAGACCCGGGGCATTGGGATCAGTGGG AGTAAGCTCGTGCCGCTAAAAAAGGCGGAAAACCCAAGAGAGGGGGACTT GGGCCAGTGGCTGGTAAAAACAACAGCTCCTGATCCAGCTCCAGCACAGC AGGGTACGGCCTCGAAGGATGACTCAGCAGATGAACACGATCCAAGTAAG AAGGAGCAAATGCCCCAATCTCCCCAGGAGAAAAAAACAAGCGGGGGAAA AGAATTGGCAGCTACTTGTGCTGTTGATTTCTCAGAAGAACAACTTAGTT CCGCTCCTCAAAGCCCAAGAGCAGCAGCAGCCATTCCCTCTGGATTTTCG GATGATTTTTTGCCGACTCAAATAGATGTAGAGATATTGGAGTCTTTACC AGAAGACATTCAAGCAGAGTTAGCACGTGCACAGGCTCGTAAATCCAGCA GCCAAACCCTCAAAGGCTCTGGAACCAATCAAAAGCCGTTACCACCTGCC CCATCTTTTTTCCAGCCCAGGAAGAAGAAAAAGCTAGCTAATAAAAAGCA AAATTCCATCCAGCCACCTGACCTAACACTTTCCCAGGTGGACCCGTCTG TGTTCAAATCACTTCCTCAGGATATTCAAGAAGAGCTGGCATCAGCCCGC CGCCCCCACCGCCCAGCGCCCCCACAGCCCAAGCCAGTACCCTCTCCAAG ACAAACCTCCCTTAGCCCGCGCCTGGCAGACACTTTTTCCCAAATGGACC CAACTGTCTTCGAATCCCTGCCCAATGACATCCAAGAGGAGTTGGTCTCG GCG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig84:1747982..1750684-

>mRNA_H-akashiwo_Contig84.51.1 ID=mRNA_H-akashiwo_Contig84.51.1|Name=mRNA_H-akashiwo_Contig84.51.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=2040bp|location=Sequence derived from alignment at H-akashiwo_Contig84:1747982..1750684- (Heterosigma akashiwo CCMP452)
GGGAGTTTTGGGACCTATTTTTCCCACAAAATCCAAAAACTTCAACACCA
ATTTATTGATGATGCTTCACAAATAGTGAGCAGTGGGTCGGGGCCAGAGT
CTAGTATTTTTCACAACGTAGTTGTTCACGTGAATGGTCTAACCAATCCT
CCCCAGCATGAGCTTCGTCGTCTCATTAATCAGCATGGTGGGCAAATGGA
TGGCTACGAAACCTCTCGTGTGACACACTACATTTGCAATAACTTGCCAG
ACGCAAAGAAGAAAGAGCTTAGAAAGCTGCGAAAACCGCCTATTGTGGTC
ACAGCAAGTTGGGTTGTTGAGTCTATAAAAGCAAAGACCCTTTTATCAAC
GGCCCCCTTTTTGGTAGGTGGTCTGCATAGGTCTCAGGAGTCAGTTTTAA
AGAGCAAGCATACAACAAGAACTGGGAAGTCAAATCTGCCAGATCAAGTC
AGTCTTCCACCACCAGATAATGCCAGTGGTGACTGGGCGGGAAAACATTT
TAGTTTGGACGAAGAAAATTTGGAGGGAGAATGCTTCAACAATGAGAGCA
ACAAGGATGGACATGGAGAAACTCATGAAGAAGAATGCTCTAGGGAAAAC
TCTGCTGGGAATCTGGACGACCCAGACGGTTTCATCGAGACCTTCTTCAA
GTGGTCCAGGCTGCACCACATCGGCCATTGGAAGATGCACTACCAAAAGC
GTGCAGCCAACCGTCAGAGGTGGACTGGGGTTGATCTAGGCGCGCTCCGG
GCAGCCCACGAGCGGACAATCCTCCATGTAGACATGGACTGCTTCTTCGT
GTCCGTGGTTGTCCGTGGTCGACCGGACCTGGAAGGGAAGCCGGTGGCGG
TGGCCCACTCAGGCCATGGCGGGGGCTCCAGCGAGGTCAGCTCGTGTAAC
TACCCCGCTCGAGCGAAGGGCGTGAAGGCCGGCATGTTCATGCAGACGGC
CAAGCAGCTCTGCCCAGAGCTGGTGGTGCTCCCTTACGACTTCAAGCTGT
ACGAGGAGGTCTCGGACCGGATCTACGACCTCTTCTTCGAGACGGCGCCC
CTGGTGCAGGCGCAGTCCTGCGACGAGGCCTACCTGCAGCTGAGCGCCGA
GGACCACGCGGCCGGGCGCGGCGCCGAGGTCGCGCGGCGGCTGCGGGCGC
GCATCCTGGCGGAGACGGGCTGCCCGGCCAGCGCGGGCATCGGGCCAAGC
ATCCTGCTCGCCCGGCTGGCCACCAAGCAGGCCAAGCCGAACGGGCAGCG
CGAGCTGACGCCGACCGCGGCCGCGGCGTGGCTGGCCCCGCTGCCGGCCG
CCGAGCTGCCGGGCGTGGGCTGGAAGCTGGCGCGGCGGCTGGAGGCCCGC
GGGCTGCGCACGTGCGGGGACCTCGCGGCCCAGCGGCCGGCGGACCTGCG
GCAGTGGTACGGGGAGCGGACGGGCGCGCTGCTGGCCGAGATGGCCCGCG
GCCGCGACGCCCGCCCGCTGGAGGGCGCGGCCCCCCGGAAGAGCGTGGGC
GCGGACGTGAACTACGGCATGCGGTTCACGGAGCGGGCTGAGGTGGAGCG
CTTCCTGCGGCAGCTGTGCGCGGAGGTGGGCCGGCGGCTGGTGGAGAACG
GGGTGGCGGCGCGGGCCGTCACGCTGAAGGTGAAGAAGAAGCGGCCGGGC
GCGGCCGAGCCGGCCAAGTTCATGGGCCACGGGGCCTGCGACAACCTGTC
GCGGAGCTTCACGTTTGCCGGGCCGGTGGCCGACGGGCCGGGGTTGTACC
CGGTGGTGCGGCGGCTGTATGCAGGCCTGGGGGTCACGCCCGAGGAGACC
CGGGGCATTGGGATCAGTGGGAGTAAGCTCGTGCCGCTAAAAAAGGCGGA
AAACCCAAGAGAGGGGGACTTGGGCCAGTGGCTGGTAAAAACAACAGCTC
CTGATCCAGCTCCAGCACAGCAGGGTACGGCCTCGAAGGATGACTCAGCA
GATGAACACGATCCAAACACTTTTTCCCAAATGGACCCAACTGTCTTCGA
ATCCCTGCCCAATGACATCCAAGAGGAGTTGGTCTCGGCG
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