mRNA_H-akashiwo_Contig84.49.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig84.49.1
Unique NamemRNA_H-akashiwo_Contig84.49.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 506 bits (1303), Expect = 1.160e-175
Identity = 245/346 (70.81%), Postives = 289/346 (83.53%), Query Frame = 1
Query:  439 LTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRRGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAELFDRHQ 1476
            + LHD L +  F RS +ESCLY  ++   G + M+AVYVDDLV+S +  +VV+  K S AS++++TD G L  ILGIKV RD RNKCF+LSQ SFI+DA++KFGLD LPAC+TP+  T DLTPTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYLKGTQSE LR GGDLVLRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKLQ AVTTSTVEAEYLALRS +KDIMWLR LL ++ CPQ EPTPV+EDNSAC+EWA DM+V+++ RHF VSYHLAKEQV+LGTIRM Y +T DQ+ADI TKALNA  F+RHQ
Sbjct:    1 MELHDHLESLGFKRSGHESCLYIHRDG--GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQ 344          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 497 bits (1279), Expect = 3.620e-171
Identity = 243/281 (86.48%), Postives = 261/281 (92.88%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLPDSN 843
            Y+QAMLKE+ SMESH VK+LVDLPPGA+ IGTRW+LSKKFDADG+LQKYKARLVAQGFTQREGVDF  TYSPVIAAPSLRLMLSIAANKGHAVEALDI T FLNSDIDGDVYVKQPPGFVDKDHP+KVWKLKKALYGLRQSP+LWY TLH+FLL QNFVRSDYESCLYTRKN  TGED+M+AVYVDDLVLSSNIPSVV+SLK+SF SRF+ITDLGPL SILGIKV+RD  NKCFYLSQASF+RDAISKFGLD LPACRTPM    DLTPTPGFK+SLPD+N
Sbjct:  129 YDQAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKYKARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK)

HSP 1 Score: 418 bits (1074), Expect = 8.230e-140
Identity = 205/231 (88.74%), Postives = 220/231 (95.24%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRN 693
            Y++AMLKE+GSMESHDVK+LVDLPPGANVIGTRWVLSKKFDADG+LQKYKARLVAQGFTQREGVDF ATYSPV+AAPSLRLMLSIAANKGHAVEALDI T FLNSDIDGDVYVKQPPGFVDKDHP+KVWKLKKALYGLRQSP+LWY TLH+FLL QNFVRSDYESCLYTRKN  TGED+M+AVYVDDLVLSSNIPSVV+SLK+SF SRF+ITDLGPL SILGIKV+RD  N
Sbjct:  200 YDRAMLKELGSMESHDVKELVDLPPGANVIGTRWVLSKKFDADGNLQKYKARLVAQGFTQREGVDFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTN 430          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 422 bits (1085), Expect = 1.990e-134
Identity = 213/486 (43.83%), Postives = 318/486 (65.43%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLP--DSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRRGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALN 1452
            + +A+  E  S+  H+V +LVD P GAN++G RW+L+KK+DADG+L KYKARL AQG++Q EGVD+  T+SPV+++ SLR +L+IAA++   +  +DI T FL+  ++ D+Y+KQP G+      +KV KLKK+LYGL+Q+PK WY  L+ FLL Q + R+ Y+SC+Y++ + +TG  ++I+VYVDD+VL+S+  S ++ +K + +  +N++D+G ++SILGIKV RD   +   LSQ SFI +A  KF +        P+    D+         L   ++ ++RS+VGT+ W+A WT PE+A+++H L +  ++P      A+    RYL  T+ + +  GG L L AY DADFC +R  G+S +G+ I LG SPI+W+S++Q  VT +T EAEY++LR+ + D+MWL+ LL  L   Q    P+ EDN ACI WA D  VS+  RH  VSYH  KE V    I + Y  T  Q+AD+FTK L+
Sbjct:  499 WREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVS-STGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 372 bits (956), Expect = 2.170e-124
Identity = 179/268 (66.79%), Postives = 216/268 (80.60%), Query Frame = 1
Query:  187 GVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYL 990
            G+DF  TYSPV+ A SLRL+L+I+ANKG+AV++LDI T FLN  +  DVYV+QPP +VD  HPNKVWKL KALYGL+QSP++WY+ LHD L +  F RS +ESCLY  ++   G + M+AVYVDDLV+S +  ++V+  K S AS++N+TD G L  ILGIKV RD RNKCF+LSQ SFI+DA++KFGLD LPAC+TP+  T DLTPTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYL
Sbjct:    3 GIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDG--GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 345 bits (885), Expect = 6.450e-110
Identity = 187/504 (37.10%), Postives = 290/504 (57.54%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTR--KNPATGEDSMI--AVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTAD--LTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGT--------QSERLRRGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAELFDR 1470
            ++QA+ +E  S+ S++  +LV  P G NVIG++WV+  K DADG++ ++KARLVAQG++Q  G+++   +SPV    S+R +L++A      +  +D+ T FLN  I+ D+Y+ QP GFVD++HP  V KLKK+LYGL+QS + W  TL  FL    + +S+ ++C+Y +  KN   G  S +  AVYVDD++  SN  +++N+ K      F +TD G +  ILG+ + RD   K  ++SQ  ++   + +FG+       TP+ TT         GF     D N Y+  +G L +++  TRP+++  V  L  Y SNP  +H+   +R  RY+KGT         SE     GD  L  Y+DA++  D    +S +GYV  + +S + W SK Q +VT ST EAEY+AL    ++ +W+R LL D+ C   EPT + EDN   IE +++     +T+H DV +H  +E+V    +++ Y  T   LADI TK L  ++F R
Sbjct:   29 WKQALKEEYNSLISNETWELVPPPEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKND-NGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGF-----DKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGD-ELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQR 525          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A5E8C4Z1_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4Z1_9ASCO)

HSP 1 Score: 357 bits (915), Expect = 9.080e-109
Identity = 193/489 (39.47%), Postives = 292/489 (59.71%), Query Frame = 1
Query:    7 QAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRRGGDLVLR--AYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAELFD 1467
            +A + EM S++ +   +LVDLPPG   I ++WV   K  ADGS+++YKARLV  GF+Q EG+D+  T++PV+   ++R++L+IAA  G  V  +D+ T FLN D+  D+Y++QP GFV K   +KV  LKK+LYGL+Q+P  W   +H  L+   F+R++ +  +YT+ + +T    +IA+YVDDL++S N   V+   K+S +S F + DLGP++  LG++V +   +    +S+  +I D + +FG+    + +TP+ T  DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  NP+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+ D KS TGYV +L   PI WA + Q +  +S+VE+EY++L    K+  W+  LL     P   P  + EDN  CI  A++ V  R+T+H DV YH+ +  +  G I + Y  T   LAD+FTK L    F+
Sbjct:  559 EACVIEMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGFIRNESDYGVYTKGSGSTMV--IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTR-DLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPIPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFE 1041          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A5E8CAT7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8CAT7_9ASCO)

HSP 1 Score: 355 bits (910), Expect = 9.350e-109
Identity = 192/489 (39.26%), Postives = 292/489 (59.71%), Query Frame = 1
Query:    7 QAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRRGGDLVLR--AYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAELFD 1467
            +A + EM S++ +   +LVDLPPG   I ++WV   K  ADGS+++YKARLV  GF+Q EG+D+  T++PV+   ++R++L+IAA  G  V  +D+ T FLN D+  D+Y++QP GFV K   +KV  LKK+LYGL+Q+P  W   +H  L+   F+R++ +  +YT+ + +T    +IA+YVDDL++S N   V+   K+S +S F + DLGP++  LG++V +   +    +S+  +I D + +FG+    + +TP+ T  DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  +P+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+ D KS TGYV +L   PI WA + Q +  +S+VE+EY++L    K+  W+  LL     P   P  + EDN  CI  A++ V  R+T+H DV YH+ +  +  G I + Y  T   LAD+FTK L    F+
Sbjct:  467 EACVIEMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGFIRNESDYGVYTKGSGSTMV--IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTR-DLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPIPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFE 949          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A2N9H9J3_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H9J3_FAGSY)

HSP 1 Score: 350 bits (898), Expect = 4.070e-108
Identity = 181/495 (36.57%), Postives = 291/495 (58.79%), Query Frame = 1
Query:   10 AMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPM----ATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERL-RRGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVI--EDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAELFDRH 1473
            AM +EM SM+ ++V +LVDLPPG   IG +WVL  K  ADGS+ +YKARLVA+G+TQREG+D+  T+SPV+   S+RL+LSI A +   +  +D+ T FLN ++D ++Y+ QP GF  K H  KV +LK+++YGL+QS + WYL  HD + +  F   + + C+Y +++  +    ++++YVDD++L+ N    + + K   +S F + D+G  + +LG+K+TRD   K   LSQ ++I+  + +F +       TPM      + D  P    + +      Y S +G+L +    TRP++ F V  + RYQSNP P H+ A +R  RYL+GT    L   GGDL L  Y+DAD+  D+ + KS +GY  +LG   + W SK Q+ +  ST+E+EY+A  + +++ +WLR  L  L         V+   D+++ + +A+D     K +H ++ YH  ++ V+ G + + +  T   +AD  TK +  +LF  H
Sbjct:  370 AMQEEMSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKVCRLKRSIYGLKQSSRQWYLRFHDSITSFGFEMIEEDHCVYLKRSKRS--ILILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCYHGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVWLRRFLQRLGVTAHAEDAVLLYSDSTSALAYAKDPKYHGKAKHIELRYHYIRDMVSQGEVILQHISTGSMVADPLTKPIARDLFFSH 862          
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 346 bits (887), Expect = 1.060e-107
Identity = 180/490 (36.73%), Postives = 293/490 (59.80%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLVAQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLNSDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLLAQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDILPACRTPMATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRRGGDLVLRA--YTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAELF 1464
            +++AM KEM S+ +++V +LV+LP G   +G++WV   K DADG+ +++KARLVAQGF+Q+ G D+  T+SPV+   S+R +++ A   G  +  +D+ T FLN ++  +VY++QP GFV K   + V KL +++YGL+QSP+ W + L + L    FV++  + C+YT    ATGE  +IAVYVDD++L+      +  +K   A  F I D+G L   LG+K+ +       ++ QA++  + + KFG++      TP+     L       S + D  +++S VG+L +++  TRP++A+ V+ + R+ + P  +H+ A +R  RYLKGT +  L    D       ++DAD+  D+ D KS++GY+  +  + + W SK QT V  ST EAEY+AL S  ++ +W+R L+ DL   QA PT + EDN + I  A++     + +H D+ YH  +E++  G I + Y  T D +AD+FTK L+ E F
Sbjct:  252 WKEAMEKEMESLYANNVWNLVELPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEHLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTA---ATGEMFIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSD-DSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKF 737          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig84.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK1.160e-17570.81Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y3B6_HETAK3.620e-17186.48Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
A0A7S3Y3C5_HETAK8.230e-14088.74Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK1.990e-13443.83Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK2.170e-12466.79Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7D9JFU5_PARCT6.450e-11037.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C4Z1_9ASCO9.080e-10939.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8CAT7_9ASCO9.350e-10939.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9H9J3_FAGSY4.070e-10836.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A498M2F0_LABRO1.060e-10736.73Retrovirus-related Pol poly from transposon TNT 1-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig84contigH-akashiwo_Contig84:1636281..1637756 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog164328.Phyra85518
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size1476
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.83e-100
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QH4V@4776|Peronosporales
DescriptionGAG-pre-integrase domain
Cds size1464
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388007.7860868-UTR-H-akashiwo_Contig84:1636280..16362921681388007.7860868-UTR-H-akashiwo_Contig84:1636280..1636292Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig84 1636281..1636292 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388007.7974136-CDS-H-akashiwo_Contig84:1636292..16377561681388007.7974136-CDS-H-akashiwo_Contig84:1636292..1637756Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 1636293..1637756 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig84.49.1prot_H-akashiwo_Contig84.49.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig84 1636293..1637756 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig84.49.1

>prot_H-akashiwo_Contig84.49.1 ID=prot_H-akashiwo_Contig84.49.1|Name=mRNA_H-akashiwo_Contig84.49.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=488bp
MLKEMGSMESHDVKDLVDLPPGANVIGTRWVLSKKFDADGSLQKYKARLV
AQGFTQREGVDFGATYSPVIAAPSLRLMLSIAANKGHAVEALDIPTVFLN
SDIDGDVYVKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYLTLHDFLL
AQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTS
FASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDIL
PACRTPMATTADLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFT
VHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRRGGDLVLRAYTDADF
CQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKD
IMWLRHLLVDLSCPQAEPTPVIEDNSACIEWARDMVVSRKTRHFDVSYHL
AKEQVNLGTIRMHYARTSDQLADIFTKALNAELFDRHQ
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mRNA from alignment at H-akashiwo_Contig84:1636281..1637756+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig84.49.1 ID=mRNA_H-akashiwo_Contig84.49.1|Name=mRNA_H-akashiwo_Contig84.49.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1476bp|location=Sequence derived from alignment at H-akashiwo_Contig84:1636281..1637756+ (Heterosigma akashiwo CCMP452)
TACGAGCAGGCCATGCTCAAAGAGATGGGTAGTATGGAATCTCATGATGT TAAAGACCTAGTGGATCTTCCTCCCGGTGCCAACGTCATTGGTACCAGAT GGGTCTTGTCGAAAAAGTTCGATGCCGATGGCAGTCTCCAGAAATATAAG GCACGGCTTGTCGCCCAAGGCTTCACACAACGCGAGGGTGTCGATTTTGG CGCAACCTACAGTCCCGTTATCGCAGCACCCAGTCTTAGGCTTATGCTCT CTATAGCTGCCAACAAAGGGCACGCTGTGGAGGCTTTGGACATACCAACT GTGTTCTTGAACAGTGACATCGACGGAGATGTGTACGTAAAACAACCACC TGGATTTGTAGACAAGGATCATCCCAACAAAGTTTGGAAGCTGAAAAAGG CTCTCTATGGCCTGCGCCAGTCACCAAAGCTCTGGTATCTTACCCTGCAT GACTTCCTCCTTGCACAAAACTTCGTCCGCAGTGACTACGAGTCCTGCCT CTACACTCGCAAAAATCCTGCCACTGGAGAGGACTCTATGATTGCGGTGT ACGTGGATGATCTGGTACTCAGTAGCAATATTCCTTCTGTCGTTAATAGT CTCAAAACCTCCTTTGCCTCGCGTTTCAACATTACCGATCTTGGTCCTCT CGATTCCATTCTCGGCATCAAGGTGACTCGGGACCTTCGTAATAAGTGCT TCTATCTGAGTCAGGCTTCTTTCATCAGGGACGCCATCTCCAAGTTCGGT TTGGATATCCTGCCGGCTTGCCGCACTCCCATGGCCACCACCGCTGATTT AACTCCCACGCCTGGCTTCAAGTCCTCCTTGCCTGATTCCAACAGGTATA GATCGATGGTTGGCACCCTGGCTTGGGTGGCCAACTGGACACGGCCTGAA CTTGCTTTTACTGTGCACAAGCTTCAAAGGTATCAAAGTAACCCTGAGCC CAAGCATTTTGAGGCTGCCCAACGAGCATTCAGGTATCTCAAAGGCACCC AATCTGAGAGGCTGAGGCGTGGGGGGGACCTGGTCCTCCGTGCATACACT GATGCTGACTTCTGCCAGGACAGGATTGATGGCAAGTCTGTCACTGGCTA TGTGATCATGCTTGGGGACTCACCTATTGTGTGGGCCTCAAAGCTTCAGA CTGCAGTTACTACATCCACTGTGGAGGCTGAGTATCTGGCACTGAGATCT GGGCTTAAGGACATAATGTGGCTGAGGCATCTTCTTGTGGACCTTTCATG CCCTCAGGCTGAGCCCACACCAGTCATTGAGGACAACTCTGCCTGTATTG AGTGGGCAAGAGATATGGTTGTTTCCAGAAAAACCAGGCACTTTGATGTG TCCTACCACCTGGCTAAAGAGCAAGTAAACCTTGGGACCATCAGGATGCA CTATGCCAGGACCAGTGATCAGTTGGCTGACATTTTCACAAAGGCTTTGA ATGCAGAACTTTTTGATAGGCATCAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig84:1636281..1637756+

>mRNA_H-akashiwo_Contig84.49.1 ID=mRNA_H-akashiwo_Contig84.49.1|Name=mRNA_H-akashiwo_Contig84.49.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1464bp|location=Sequence derived from alignment at H-akashiwo_Contig84:1636281..1637756+ (Heterosigma akashiwo CCMP452)
ATGCTCAAAGAGATGGGTAGTATGGAATCTCATGATGTTAAAGACCTAGT
GGATCTTCCTCCCGGTGCCAACGTCATTGGTACCAGATGGGTCTTGTCGA
AAAAGTTCGATGCCGATGGCAGTCTCCAGAAATATAAGGCACGGCTTGTC
GCCCAAGGCTTCACACAACGCGAGGGTGTCGATTTTGGCGCAACCTACAG
TCCCGTTATCGCAGCACCCAGTCTTAGGCTTATGCTCTCTATAGCTGCCA
ACAAAGGGCACGCTGTGGAGGCTTTGGACATACCAACTGTGTTCTTGAAC
AGTGACATCGACGGAGATGTGTACGTAAAACAACCACCTGGATTTGTAGA
CAAGGATCATCCCAACAAAGTTTGGAAGCTGAAAAAGGCTCTCTATGGCC
TGCGCCAGTCACCAAAGCTCTGGTATCTTACCCTGCATGACTTCCTCCTT
GCACAAAACTTCGTCCGCAGTGACTACGAGTCCTGCCTCTACACTCGCAA
AAATCCTGCCACTGGAGAGGACTCTATGATTGCGGTGTACGTGGATGATC
TGGTACTCAGTAGCAATATTCCTTCTGTCGTTAATAGTCTCAAAACCTCC
TTTGCCTCGCGTTTCAACATTACCGATCTTGGTCCTCTCGATTCCATTCT
CGGCATCAAGGTGACTCGGGACCTTCGTAATAAGTGCTTCTATCTGAGTC
AGGCTTCTTTCATCAGGGACGCCATCTCCAAGTTCGGTTTGGATATCCTG
CCGGCTTGCCGCACTCCCATGGCCACCACCGCTGATTTAACTCCCACGCC
TGGCTTCAAGTCCTCCTTGCCTGATTCCAACAGGTATAGATCGATGGTTG
GCACCCTGGCTTGGGTGGCCAACTGGACACGGCCTGAACTTGCTTTTACT
GTGCACAAGCTTCAAAGGTATCAAAGTAACCCTGAGCCCAAGCATTTTGA
GGCTGCCCAACGAGCATTCAGGTATCTCAAAGGCACCCAATCTGAGAGGC
TGAGGCGTGGGGGGGACCTGGTCCTCCGTGCATACACTGATGCTGACTTC
TGCCAGGACAGGATTGATGGCAAGTCTGTCACTGGCTATGTGATCATGCT
TGGGGACTCACCTATTGTGTGGGCCTCAAAGCTTCAGACTGCAGTTACTA
CATCCACTGTGGAGGCTGAGTATCTGGCACTGAGATCTGGGCTTAAGGAC
ATAATGTGGCTGAGGCATCTTCTTGTGGACCTTTCATGCCCTCAGGCTGA
GCCCACACCAGTCATTGAGGACAACTCTGCCTGTATTGAGTGGGCAAGAG
ATATGGTTGTTTCCAGAAAAACCAGGCACTTTGATGTGTCCTACCACCTG
GCTAAAGAGCAAGTAAACCTTGGGACCATCAGGATGCACTATGCCAGGAC
CAGTGATCAGTTGGCTGACATTTTCACAAAGGCTTTGAATGCAGAACTTT
TTGATAGGCATCAG
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