mRNA_H-akashiwo_Contig84.20.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig84.20.1
Unique NamemRNA_H-akashiwo_Contig84.20.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A6V1V8T3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V8T3_HETAK)

HSP 1 Score: 112 bits (279), Expect = 2.630e-23
Identity = 87/268 (32.46%), Postives = 133/268 (49.63%), Query Frame = 3
Query:   39 YEPHGRVHVLLGGAVNCAEEFD--ALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDC--SGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLE---AVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWP-DPPYFQPYEEYCTGHAADDKVLFGMHPLL------DLSSGEKT--QP---TVKEWAELVGP---GGAELPYVYDTLDWDYCQD-YGVHDVL 773
            + PHG VH+LLGG +NCAE +   A A + EE D    L+++RA  YA +KN +R   + C  +   GC CP+ + ++S +  T AD+FL +     GL       D A +  +V A C +    G++ Q+S+S+ P FW +H   ER+   +R         RGG    +  +W      F  + + C GH  +D +L G    L       L +G +   QP   TV+ +  L+ P       L Y+YD +DW YC+D YG  D++
Sbjct:  413 FRPHGSVHILLGGLLNCAEGWQKAAAAGVPEEPD----LKMMRAWNYAYYKNAFRMDLMACDDTDVDGCYCPEYDAMMSDI--TKADDFLNR----LGLARWCTDCDEAQRTAVVDAFCTNGAVAGEASQASSSFMPEFWPIHGTLERLFQLRR--------LRGG----WDDDWDWSAETFSGHYDSCFGHGRNDPILLGKDAFLVRARPFHLGAGGEADRQPSDFTVENFHALLDPLDPASQRLDYIYDNVDWTYCRDSYGYDDLV 658          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 4.050e-19
Identity = 78/277 (28.16%), Postives = 119/277 (42.96%), Query Frame = 3
Query:    9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLS-----AVNGTSADEFLLKALPGFGLEAVL---DPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPP--YFQP-----------YEEYCTGHAADDKVLFGMHPL----------LDLSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYC 746
            D+ S+    +Y+PHG VH+ +GG ++C E ++ +  L  +   S+    L   ++   KNLYR     C G    A   EE +LS       N T  +++         ++ V+   D   K  +V A+C + L DGD LQ+S+S DP+FW  H   ER+            ++    G +    WPD    Y  P           YEE C GH   D   FG+             +  +S    + T +E  +   P    LPYVYDT +W++C
Sbjct:  468 DFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQ----LAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVMLSRCGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLW-----------MYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHC 729          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S4DDY2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDY2_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 1.510e-18
Identity = 61/154 (39.61%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVLDP--ALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERM 464
            DW S   Y  Y+PHG VHVLLGGA+ CAE +DA+       D S  +   R   +A  KN YR + ++C+   GC C D +  L++    S        L   G+ ++ D   A  A +V A+CNS +  GD+LQSS+SW P FW +H   ERM
Sbjct:  297 DWFS---YASYKPHGPVHVLLGGALGCAEAWDAVEA--SGVDPS-LVPHWRGNTFAYLKNAYRLELMECASTDGCYCLDYDSYLASAEAAS------NFLGAIGMTSIGDLTFAQAATIVDAVCNSGMVLGDNLQSSSSWTPEFWPIHGNVERM 438          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 3.370e-17
Identity = 76/287 (26.48%), Postives = 113/287 (39.37%), Query Frame = 3
Query:    9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSA---------VNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPPY-------------FQPYEEYCTGHAADDKVLFGMHPLLDLSSGEKT-------------QPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGVH 764
            D+ S+    +Y+PHG VH+ +GG ++C + +  +  L  E    E    L   ++   KNLYR     CSG  G     EE L +            GT   +   +      +   +D  +K  +   +C +   DGD LQ+S+S DP+FW  H   ER+            ++    G +    WPD                   Y + CTGH   D   FG   LLD  + + T             Q T +E  +        LPYVYDT  W +C+  GV+
Sbjct:  447 DFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGE----LAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEILSTGQCGCLGYDLTQGTDYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLW-----------MYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFG---LLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVN 715          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 3.370e-17
Identity = 88/302 (29.14%), Postives = 129/302 (42.72%), Query Frame = 3
Query:    9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNG------TSADEFL--------LKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPP----------YFQP---YEEYCTGHAADDKVLFGM--HPLLDLS--SGEKTQP-------TVKEWAELVGPGGAELPYVYDTLDWDYCQDYG--VHDV-LGRDDDE 791
            D+ S+    +Y+PHG VH+ +GG ++C E +       E     E    L  MA+   K+++R     C G+       +E L S V G      T  D++L        +K L G       D   K  LVR +C++ + +GD LQSS+S DP+FW  H   ER+            ++    G +   EWPD            Y QP   Y E C GH   D   F +  + + D +  +G K  P       T +E      P    LPYVYDT +W +C + G  + D  L + D+E
Sbjct:  428 DFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVD---IEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDS-----DENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLW-----------MYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEE 710          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S2C8R5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8R5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.100e-15
Identity = 68/271 (25.09%), Postives = 117/271 (43.17%), Query Frame = 3
Query:    6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYL-------------DCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRL-ADGDSLQSSASWDPAFWLVHAAAERMVAAK-RGGTVAAKVHRGGGGGLFGGEWPDPPYFQPYEEY-----CTGHAADDKVLFGMHPLLDLSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYG 758
            D +  F   + Y PHG +H L+GG +NCAE FD L  +    + +  ++  R++A+   K+++R  +L             +C       C D +  L   N T   E+L   +   G     + + K  ++  +C S L ++GD+L+S++  D +FW +H   +R+   K   GT   +            EWP   Y+  +  Y       GH  DD + + + PL+          T  ++ E   P    LPY+Y    W++C+  G
Sbjct:   17 DTYEGFTHNIAYAPHGSIHALIGGTLNCAEPFDQLLDM--GMNETHVMQW-RSLAFNGLKDMFREGHLAFPKYCSLDTPYSECH----ATCKDLDRYLVERNETGLAEYLA-LIDVLGFLDNYNESTKWGVLEVMCKSGLGSEGDNLESASPMDISFWPIHPTVDRLWQYKVLSGTFTNE------------EWPSENYY--WGTYGDDGDVAGHGPDDSLPYELGPLIHDGF------TNSDFYEFSRPTSPNLPYIYANFHWEHCESLG 259          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.680e-13
Identity = 73/279 (26.16%), Postives = 113/279 (40.50%), Query Frame = 3
Query:    9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNG------TSADEFLLKALPGFGLEAVL---DPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERM-VAAKRGGTVAAKVHRGGGGGLFGGEWPDPPY-------------FQPYEEYCTGHAADDKVLFGMHPL----LDLSSGEKTQP-----TVKEWAELVGPGGAELPYVYDTLDWDYCQ 749
            D+ S+  Y +Y+PHG VH+ +GG ++C + F A+A L       +    L   ++   KNL+R     C G+        E L S   G      T  D++         L+ ++   D  +K  +V ALC + + DGD LQ+S+S DP+F+  H   ER+ + A   G +                WPD                   Y E C GH   D   FG+        ++ +G K        T +E  +        + YVYDT  W +C+
Sbjct:  482 DFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAED----LALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFT------------WPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCE 744          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S3XTZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTZ6_HETAK)

HSP 1 Score: 81.3 bits (199), Expect = 3.410e-13
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 3
Query:    6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVLDPAL--KAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAER 461
            ++W S    + Y PHG VH++ GG + C E +DAL PL   +DR+  ++  +   +  HKN YR   L C     C CP+ E  +       A   +LK +    ++   D  L  +  +  A+CNS   +GD+LQ+S+S+ P FW +H   ER
Sbjct:  238 EEWLS---KVSYGPHGPVHIMAGGMLQCQEVWDALYPL--GWDRAT-VDYYKGFHFGFHKNAYRYGVLSCEDV--CYCPEFETYMRDEKALGA---MLKQMGVVLVDGYSDYTLDQRKAIANAICNSGAVNGDNLQASSSFTPEFWPIHGLIER 380          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S2FM18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM18_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.090e-12
Identity = 69/272 (25.37%), Postives = 120/272 (44.12%), Query Frame = 3
Query:    6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLD----CSG-------AGGCACPDEE----ELLSAVNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKR-GGTVAAKVHRGGGGGLFGGEWPDPPYFQPYE-EYCTGHAADDKVLFGMHPLLDLSSGEK---TQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGV 761
            D W  FG  L Y+PH RVH ++GG+       + +A  F++    +  E++  + +   KN++R   +D    CS         G C+   +E    ++ S +N T  D  ++ ++    LE  ++      +V A+C S L  GD ++S++  D +FW +H   ER+   K+  GT   +             WP     +  +   C GH ++D  L  M  ++  + G +   T  T  EW  L+ P    +PY+YD     +C  Y +
Sbjct:  136 DSWFDFGWGLQYDPHARVHSVIGGSEAGTSFENNVAKHFDD----DVNEIISKIMFVWTKNMWRNYKIDFPTVCSPDTPQHACVGSCSDIGDEIQNRDIESYIN-TFGDSTVISSIKSLVLEDQIE------VVTAMCESSLCIGDQMESASPTDISFWPIHPNLERVWMIKKLSGTFTDE------------SWPQNSTSKSSDGSTCYGHGSED--LLPMEGIVSGTEGVEWNATNLTNSEWYRLLDPLNGHMPYLYDDFTLKHCNFYNL 382          
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S2CAB6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAB6_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.410e-12
Identity = 72/271 (26.57%), Postives = 117/271 (43.17%), Query Frame = 3
Query:    6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLD----CSG-------AGGCACPD---EEELLSAVNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPPYFQPYEEY----CTGHAADDKVLFG-MHPLLDLSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGV 761
            D W  FG  + Y PH RVH ++GG+ +    FD L+  F+E      LE +  + ++  KNL+R   ++    CS         G C   D   ++   +A   T  DE ++ A    G     D   KA  + ALC + L+ GD ++S++  D +FW +H   ER+   K+  +                 WP+       +      C GH   D + +G ++  +D  + +    T K    L+ P  ++LPYVYD     +CQ Y +
Sbjct:  297 DTWFDFGWAMPYNPHARVHSVIGGSES-GPSFDVLSDYFDE----TILEDISKLQFSWTKNLWRNYKIEFPSYCSSDTPQHQCTGSCTFLDLAHKKGSFAAYIDTFGDEVVIAAFNTLGN----DDQYKA--LGALCENGLSIGDQMESASPADISFWPIHPNLERIWMIKKLSSTFQNE-----------SWPETGTSLATDTTASGECYGHGPYDLLPYGDIYGSMDNLADKNNNLTNKGLYNLMDPMNSDLPYVYDDFSLKHCQHYDI 545          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6V1V8T3_HETAK2.630e-2332.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LC42_ECTSI4.050e-1928.16TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
A0A7S4DDY2_HETAK1.510e-1839.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5J7R8_9PHAE3.370e-1726.48TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5J676_9PHAE3.370e-1729.14TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A7S2C8R5_9STRA8.100e-1525.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LC46_ECTSI1.680e-1326.16Tyrosinase_Cu-bd domain-containing protein n=3 Tax... [more]
A0A7S3XTZ6_HETAK3.410e-1333.12Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2FM18_9STRA2.090e-1225.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CAB6_9STRA4.410e-1226.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig84contigH-akashiwo_Contig84:620290..625400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009039156.1
PFAMsSBF_like
Model size1111
Max annot lvl2759|Eukaryota
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.64e-16
EggNOG OGsCOG0385@1|root,KOG4821@2759|Eukaryota
Descriptionsymporter activity
Cds size765
COG categoryJ
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig84.20.1prot_H-akashiwo_Contig84.20.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig84 620601..625365 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388006.7710352-UTR-H-akashiwo_Contig84:620289..6206001681388006.7710352-UTR-H-akashiwo_Contig84:620289..620600Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig84 620290..620600 -
1681388006.8518288-UTR-H-akashiwo_Contig84:625365..6254001681388006.8518288-UTR-H-akashiwo_Contig84:625365..625400Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig84 625366..625400 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388006.7836564-CDS-H-akashiwo_Contig84:620600..6206931681388006.7836564-CDS-H-akashiwo_Contig84:620600..620693Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 620601..620693 -
1681388006.7944133-CDS-H-akashiwo_Contig84:622194..6222961681388006.7944133-CDS-H-akashiwo_Contig84:622194..622296Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 622195..622296 -
1681388006.8142223-CDS-H-akashiwo_Contig84:623534..6236391681388006.8142223-CDS-H-akashiwo_Contig84:623534..623639Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 623535..623639 -
1681388006.831844-CDS-H-akashiwo_Contig84:624835..6248591681388006.831844-CDS-H-akashiwo_Contig84:624835..624859Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 624836..624859 -
1681388006.841628-CDS-H-akashiwo_Contig84:624924..6253651681388006.841628-CDS-H-akashiwo_Contig84:624924..625365Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig84 624925..625365 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig84.20.1

>prot_H-akashiwo_Contig84.20.1 ID=prot_H-akashiwo_Contig84.20.1|Name=mRNA_H-akashiwo_Contig84.20.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=255bp
MYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHK
NLYRGQYLDCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVL
DPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGG
TVAAKVHRGGGGGLFGGEWPDPPYFQPYEEYCTGHAADDKVLFGMHPLLD
LSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGVHDVLGRDD
DELL*
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mRNA from alignment at H-akashiwo_Contig84:620290..625400-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig84.20.1 ID=mRNA_H-akashiwo_Contig84.20.1|Name=mRNA_H-akashiwo_Contig84.20.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5111bp|location=Sequence derived from alignment at H-akashiwo_Contig84:620290..625400- (Heterosigma akashiwo CCMP452)
CCCGGGACGACTGGGCCTCCTTCGGCAAGTACCTGATGTACGAGCCCCAC GGGCGCGTGCACGTGCTGCTGGGCGGGGCCGTGAACTGCGCGGAGGAGTT CGACGCCCTCGCGCCGCTCTTCGAGGAGTACGACCGGTCCGAGAAGCTCG AGCTGCTGCGCGCGATGGCCTACGCCGCGCACAAGAACCTGTACCGGGGC CAGTACCTGGACTGCTCGGGCGCAGGGGGGTGCGCGTGCCCGGATGAGGA AGAGCTGCTGAGCGCGGTCAACGGCACGTCCGCGGACGAGTTCCTGCTGA AGGCGCTGCCCGGGTTCGGGCTGGAGGCGGTGCTGGACCCGGCGCTGAAG GCGCCGCTGGTGCGCGCGCTGTGCAACAGCCGGCTGGCGGACGGGGACTC CCTGCAGAGCTCGGCCTCCTGGGACCCGGCGTTCTGGCTGGTGCACGCGG CCGCCGAGCGGATGGTGGCGGCCAAGGTGGGAAGGGGAGGGGAACGAATG AGCGGGGGGCGGCGGCCGAAGTGGGGAGGGGGGGACACGAGCGAGGGGGG ACGGTGGCGGCCAAGGTGGGGAAGGGGGGACACGAGCGAAAGGGAAGGGC GGCGGCCAAAGTGGGGAGGGGGGGAAAACGAGCGAGGGGGGACGGTGGCG GCCAACGTGGGGTGGGGGAACGAGCGAGGGGCGGCGGCGGCGACGGCAGG GCCGCGCGGGGGGAGGGGCGAGGGGGTGGGTCGGGCGTTCCGGCGGTGGC GCGGGCGAAAGACGGCGGACGTGGGGCAATGGAGCATCGCGTGTGGGGCG CTGTGGCGGTTGTTCAATCGAGGCGGCGTCCTCCGGAAAACCGTTCGACG AATGTTTATTATGCGGATTCCAGGCCAAGGCGCGTGTACGAAGACGGTGG TGCATGAGAGGAGCAACTGCATGATGACACAAACAGACATATAGAAAGAA AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG AAAGAAAGAAAGAAAGAAAGGGTGGGGAAGGGAAAGGCCGGGGTGGCGTG GAGTGGGTGCGAGGCCGGGTCACAGGTACCTGGGGCAGAGCAACAAACAG TCCAAGGCTGCGGGGGTATAGCCAAAAGTCAGTCCTCTTAATCGACGTCA CCACTCTGATGAGGTTGCTATAGAATCTGACTGTACTGTTCATGAAGTGT GTTTCCCCATGTATATATAACCCAGCATAGAAACCAGTAAAAGTAAGCAT ATCCATTAACCAAAATATACAGCAAAAGATAACATGTCAGTCTGGTTGCA TGGTGCATGGCGCTCGGGACACCGATCCTTGATTTGTTCCTCTAAAAGTG CAAAAGTGCTCGTCGATGCTCTTTGGAAGTAGTGCTTGTGTGATTATGGA GACGACTTTTTGTCGGTGTGCAATTTTATAGCAGGGAGGACTGTATAGTT GTTGTTGCATTCTTTCTCCCAGCTGAGAGCTGTTGTGGAACATAGTACTT GTTGGTTGTAGTTGTTGTATAGCTGTAGAGGAAGGGAAGTGATATTCACC TGACGTGTTGAAGTTTTGGACACACACAGTTCAAGAAAAGAAGCACACCA CCACCACCAGGCACCAAGCCTGGAGTGTAAAACACATCACACCCCCCTTG TACACCAATCAGTACATCTGATCTTGATAAAAAACGAAAAACAATTTAAA ACAACGAAAAAAAAAAAAAAAAAAAAAAAAAAATCCACCTCCACCCCCCA CCACCACCAAGGTGCACCGCGGGGGGGGCGGGGGGCTGTTCGGCGGGGAA TGGCCGGACCCGCCCTACTTCCAGCCGTACGAAGAGTACTGCACGGGCCA CGCCGCGGACGACAAGGTCCGCCCGGGCCCGCCCCCCCTCTTCCACGCAC GGTGACTTCGCTCTTGTGGGGTACGCGCGGCGGGGCTGTTGATCGTTCTA CCCCCTGGTGTTGTCCCGTGGGTCGGTGTGGTTATTGGGGCATGAACGGA AATGAACGCGCGCGCAACGCGCACTTTTACTCTTGCGGGGCGACTTATAT CCTGGGGGACAATTTGACGGACGAGATCACAGACCTGAGTGTTTCTGGCA GGGGTCATGTGCCCTCAACTCAAACGGCTCAAGAGAGCTGGGAGTCATCC CATTATCTGGCTTTCTCTATACCCAGAACGGGAGGGTGGGTGTATGGCGT AATCAAGCATGATGCGCGTTGATCTCCCTAGTTTTACGCAACGATGATGA TGGAGATATTTACTTCATATACGCTTCAATGTCTGCAAGTCCAAGACCCA AGACCGGCGAGAAGAGTGCAAGTTTCTCTTTCACCATTGACAAAAGGCGC ATCCTCGATCTGAGGTGGACTAATACATCTGATCGTGGAGCAGTATACAC CAAGAGGCCGGAGCTAGAATTTGACTTTCCATTTGGCGTCAGTGGTGAGA GGTTCTGGTCTGGCTCAGTTCAACAAGAAGCTCCTTAGGTTTGTCTATTC TCCCATCAGCAAACATATCGTGGCCAAGACCCTCGGAAAGAGCAAAGTTT TTGGCCCTCCCTGATCATCAACTCATACACGGGACGTTGCTCCAGACACA CTTCTACCAACATTTTGCCAACTCTGGCTGCTCCAAAATCCATCTCATTC AGGCTGGACGTTGTTGGAAATCAGCTGAAGCCTGCGATGGCTACCTTACC ATCTCGAACCTCTCCAGGACCAACGTGGCAGCTGCCAGCACCAGTGGCAC CTTTCGGCCCCAAGCCTATTATTGTTCTGCCCTTTCTCCCCCCCTGAATC CGTTGCAGAGCCTCCTCTTGCCATCACCCAGAATAAAGAGGAAGGGATGA CCATTACTGAACTCCAGAGGAAACCTGAAGATATTGAAGAAGATGAAGAT CGACGAGAGGAAACCTGCTTCTGCAGCTGCTGCCCTTGCTGCTGTTCACA TGAAGCTTGGTGCATGCTTTACCAACCGCCACTTTACCTTGAAGCAGTGT TTGGTCCTATTAAGGTTCTTCAAAGACCATCTTTAAAACACCATTTTGAT GTGTTTTCTGCTCTCCCCGTGTTTACCTTTTATAATTATATTATGTATAT ATAGGTACTTTTTGGAATGCACCCACTGCTGGATCTTAGCTCAGGAGAAA AGACACAACCAACTGTTAAAGAGTGGGCAGAGCTGGTTGGCCCTGGGGGT GCTGAGGTAAGAAGGGGGGTATCAGCTCATTGTGCACCAATGAACGCTGT TCTTCAAAAATGAACAGAGACCGCATATGTCTTAAGGTGTCAAGAACTCT CATTTTTCTTTCCATACAAACTTTCTTTGCCGAGATACTGGGGGGTACCT TAAAACATCAGTCTTACCACTTTGCACCATACCTCCTCGTAATACGTATG GATGCCTACTTGTGAGTGAGCTTGTTTATCTTTTCGACATTGGCATCGAG AAGCAGGAATTTTGTTCAATGTAGCAGCATAATACAAAGGCCTCTTGATA ATAATATATATATATATATATATATGATGATGATGATGATTTTAGTTTAG TTTACAGGGTCTAGGCTATCTCCTCTCACTAGGGGAGGCGTGAATCCCCC TGCAGGAACGACCAGGCGACACTATCCATCATGTTGCAAATTCTTGAACC AATTCATAAACCACTTCATCTGTTTTTGAGTCCCCCCCTTGCTCAACCCC CCCCACCGAGCGCTCCCTGTCCCCCCGAATAGGTGGCCACATGTAGGTGG CCACCACCCCACCAAGTCGCCACCTTACTGCAGTCCCTCTAGCACAGCCC CAACTGGGTCCTCCATGACCGCCACCGATCTTCCACCCACTTCTCCGACG GGTTGAAGGGGTAGATCTCGCGCATCATCTTGTCGAAGAAGGCCCGTCCC CCGTGCATGGTGCACCCCCCCCCCCACGTTCCCCCCTCCTGCAGCAGACT TGACATCCTCCCGTAGGACATTTTCTGAGCACCACTCCACTGATCTCAAT TTCTTGTGGGTGTTTGGCGATGCCGCACTTCCCACAAGCAACTTCAAGCT TGGTCAAGCCAATCCTGGCCCACAATCGTGAGGCCAGCTTGTCCTCCTCA GACCCACCACCTCCGGGCCGCCCAGCTACAGCTCCCCGCCCAGGCCCTCC CCCTATATATATATATATTGGTATCTGCGCACGTTACAAATCTTTACTAT TTTAAATGTGTGCTTTGAATCCCAACAAGGACTGGAAGATTCAGTGAAAT ATATATATCGTGGTATTTTTGTTTGTGTTTTTCTTCTCTGCTATACTTAT TCTTTTGATACTCGTTTCTTGTGCTTCTTCTAAAAAAGAAGTGAGGATGA TTTGTGCTGACGCCTTTTTTTGTGCTTTCTTTTCTCTTTTTCTTCGTATG TCTCTTTTACTTCACCATTATGAGCGGTGGTGGTGGTGAGGCTTGCTCTA TCTGCTCATGAACGATCAGAACTACTTAGTATAAAAATACTATATTTCTC CATCAAAGCTAGACCGGTCCTTCTGGGCTCCGTGGGAAGGCTTCTATCCT GTATTTTGGCAATGGTGGACTACTGCTCTTGTGTATATATAATTATGTTA TTTATATAGGTGAGTACTGTACATGCATCACGTATGGATCAAAAGCACAT CATGGGTCATACCACAGCGGGACATGACCCCCCCCCCCAACAACCCTTCT TCACTAGCTGCCTTATGTCTACGATACCTTGGACTGGGACTACTGCCAGG ATTATGGCGTACATGATGTTCTGGGGCGGGATGATGATGAACTACTGTGA TACATGGTGTTCCCAGATTATTGTATTATTATATACTAATATATTATAAT ATATATTTATTATTTATAATATTGTTGAAGCAGCAGGGTGGTGGAGGTTG CAACAGGCAATAATGCAACACTACAACAGTAGTGCTGCTGCTGTTGTTGT TGTGGGGCAAGAGTGGGGCAGTCACAAAGAGAAAGAGGGCAGGATCCACT CCCCTTTTATTTTTCTTCTCGCTTTTTTTTTTCTGTTGATCAATTCTACC CCTGAACAATATAAAAAATCTACCACCAAGTAAAAATTAATGCTAGTTCC TTTGCCGTTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig84:620290..625400-

>mRNA_H-akashiwo_Contig84.20.1 ID=mRNA_H-akashiwo_Contig84.20.1|Name=mRNA_H-akashiwo_Contig84.20.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=765bp|location=Sequence derived from alignment at H-akashiwo_Contig84:620290..625400- (Heterosigma akashiwo CCMP452)
ATGTACGAGCCCCACGGGCGCGTGCACGTGCTGCTGGGCGGGGCCGTGAA
CTGCGCGGAGGAGTTCGACGCCCTCGCGCCGCTCTTCGAGGAGTACGACC
GGTCCGAGAAGCTCGAGCTGCTGCGCGCGATGGCCTACGCCGCGCACAAG
AACCTGTACCGGGGCCAGTACCTGGACTGCTCGGGCGCAGGGGGGTGCGC
GTGCCCGGATGAGGAAGAGCTGCTGAGCGCGGTCAACGGCACGTCCGCGG
ACGAGTTCCTGCTGAAGGCGCTGCCCGGGTTCGGGCTGGAGGCGGTGCTG
GACCCGGCGCTGAAGGCGCCGCTGGTGCGCGCGCTGTGCAACAGCCGGCT
GGCGGACGGGGACTCCCTGCAGAGCTCGGCCTCCTGGGACCCGGCGTTCT
GGCTGGTGCACGCGGCCGCCGAGCGGATGGTGGCGGCCAAGCGAGGGGGG
ACGGTGGCGGCCAAGGTGCACCGCGGGGGGGGCGGGGGGCTGTTCGGCGG
GGAATGGCCGGACCCGCCCTACTTCCAGCCGTACGAAGAGTACTGCACGG
GCCACGCCGCGGACGACAAGGTACTTTTTGGAATGCACCCACTGCTGGAT
CTTAGCTCAGGAGAAAAGACACAACCAACTGTTAAAGAGTGGGCAGAGCT
GGTTGGCCCTGGGGGTGCTGAGCTGCCTTATGTCTACGATACCTTGGACT
GGGACTACTGCCAGGATTATGGCGTACATGATGTTCTGGGGCGGGATGAT
GATGAACTACTGTGA
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