mRNA_H-akashiwo_Contig84.20.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A6V1V8T3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V8T3_HETAK) HSP 1 Score: 112 bits (279), Expect = 2.630e-23 Identity = 87/268 (32.46%), Postives = 133/268 (49.63%), Query Frame = 3
Query: 39 YEPHGRVHVLLGGAVNCAEEFD--ALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDC--SGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLE---AVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWP-DPPYFQPYEEYCTGHAADDKVLFGMHPLL------DLSSGEKT--QP---TVKEWAELVGP---GGAELPYVYDTLDWDYCQD-YGVHDVL 773
+ PHG VH+LLGG +NCAE + A A + EE D L+++RA YA +KN +R + C + GC CP+ + ++S + T AD+FL + GL D A + +V A C + G++ Q+S+S+ P FW +H ER+ +R RGG + +W F + + C GH +D +L G L L +G + QP TV+ + L+ P L Y+YD +DW YC+D YG D++
Sbjct: 413 FRPHGSVHILLGGLLNCAEGWQKAAAAGVPEEPD----LKMMRAWNYAYYKNAFRMDLMACDDTDVDGCYCPEYDAMMSDI--TKADDFLNR----LGLARWCTDCDEAQRTAVVDAFCTNGAVAGEASQASSSFMPEFWPIHGTLERLFQLRR--------LRGG----WDDDWDWSAETFSGHYDSCFGHGRNDPILLGKDAFLVRARPFHLGAGGEADRQPSDFTVENFHALLDPLDPASQRLDYIYDNVDWTYCRDSYGYDDLV 658
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 4.050e-19 Identity = 78/277 (28.16%), Postives = 119/277 (42.96%), Query Frame = 3
Query: 9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLS-----AVNGTSADEFLLKALPGFGLEAVL---DPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPP--YFQP-----------YEEYCTGHAADDKVLFGMHPL----------LDLSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYC 746
D+ S+ +Y+PHG VH+ +GG ++C E ++ + L + S+ L ++ KNLYR C G A EE +LS N T +++ ++ V+ D K +V A+C + L DGD LQ+S+S DP+FW H ER+ ++ G + WPD Y P YEE C GH D FG+ + +S + T +E + P LPYVYDT +W++C
Sbjct: 468 DFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQ----LAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVMLSRCGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLW-----------MYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHC 729
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S4DDY2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDY2_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 1.510e-18 Identity = 61/154 (39.61%), Postives = 83/154 (53.90%), Query Frame = 3
Query: 9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVLDP--ALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERM 464
DW S Y Y+PHG VHVLLGGA+ CAE +DA+ D S + R +A KN YR + ++C+ GC C D + L++ S L G+ ++ D A A +V A+CNS + GD+LQSS+SW P FW +H ERM
Sbjct: 297 DWFS---YASYKPHGPVHVLLGGALGCAEAWDAVEA--SGVDPS-LVPHWRGNTFAYLKNAYRLELMECASTDGCYCLDYDSYLASAEAAS------NFLGAIGMTSIGDLTFAQAATIVDAVCNSGMVLGDNLQSSSSWTPEFWPIHGNVERM 438
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.370e-17 Identity = 76/287 (26.48%), Postives = 113/287 (39.37%), Query Frame = 3
Query: 9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSA---------VNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPPY-------------FQPYEEYCTGHAADDKVLFGMHPLLDLSSGEKT-------------QPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGVH 764
D+ S+ +Y+PHG VH+ +GG ++C + + + L E E L ++ KNLYR CSG G EE L + GT + + + +D +K + +C + DGD LQ+S+S DP+FW H ER+ ++ G + WPD Y + CTGH D FG LLD + + T Q T +E + LPYVYDT W +C+ GV+
Sbjct: 447 DFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGE----LAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEILSTGQCGCLGYDLTQGTDYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLW-----------MYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFG---LLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVN 715
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.370e-17 Identity = 88/302 (29.14%), Postives = 129/302 (42.72%), Query Frame = 3
Query: 9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNG------TSADEFL--------LKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPP----------YFQP---YEEYCTGHAADDKVLFGM--HPLLDLS--SGEKTQP-------TVKEWAELVGPGGAELPYVYDTLDWDYCQDYG--VHDV-LGRDDDE 791
D+ S+ +Y+PHG VH+ +GG ++C E + E E L MA+ K+++R C G+ +E L S V G T D++L +K L G D K LVR +C++ + +GD LQSS+S DP+FW H ER+ ++ G + EWPD Y QP Y E C GH D F + + + D + +G K P T +E P LPYVYDT +W +C + G + D L + D+E
Sbjct: 428 DFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVD---IEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDS-----DENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLW-----------MYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEE 710
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S2C8R5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8R5_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.100e-15 Identity = 68/271 (25.09%), Postives = 117/271 (43.17%), Query Frame = 3
Query: 6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYL-------------DCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRL-ADGDSLQSSASWDPAFWLVHAAAERMVAAK-RGGTVAAKVHRGGGGGLFGGEWPDPPYFQPYEEY-----CTGHAADDKVLFGMHPLLDLSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYG 758
D + F + Y PHG +H L+GG +NCAE FD L + + + ++ R++A+ K+++R +L +C C D + L N T E+L + G + + K ++ +C S L ++GD+L+S++ D +FW +H +R+ K GT + EWP Y+ + Y GH DD + + + PL+ T ++ E P LPY+Y W++C+ G
Sbjct: 17 DTYEGFTHNIAYAPHGSIHALIGGTLNCAEPFDQLLDM--GMNETHVMQW-RSLAFNGLKDMFREGHLAFPKYCSLDTPYSECH----ATCKDLDRYLVERNETGLAEYLA-LIDVLGFLDNYNESTKWGVLEVMCKSGLGSEGDNLESASPMDISFWPIHPTVDRLWQYKVLSGTFTNE------------EWPSENYY--WGTYGDDGDVAGHGPDDSLPYELGPLIHDGF------TNSDFYEFSRPTSPNLPYIYANFHWEHCESLG 259
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.680e-13 Identity = 73/279 (26.16%), Postives = 113/279 (40.50%), Query Frame = 3
Query: 9 DWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNG------TSADEFLLKALPGFGLEAVL---DPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERM-VAAKRGGTVAAKVHRGGGGGLFGGEWPDPPY-------------FQPYEEYCTGHAADDKVLFGMHPL----LDLSSGEKTQP-----TVKEWAELVGPGGAELPYVYDTLDWDYCQ 749
D+ S+ Y +Y+PHG VH+ +GG ++C + F A+A L + L ++ KNL+R C G+ E L S G T D++ L+ ++ D +K +V ALC + + DGD LQ+S+S DP+F+ H ER+ + A G + WPD Y E C GH D FG+ ++ +G K T +E + + YVYDT W +C+
Sbjct: 482 DFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAED----LALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFT------------WPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCE 744
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S3XTZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTZ6_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 3.410e-13 Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 3
Query: 6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLDCSGAGGCACPDEEELLSAVNGTSADEFLLKALPGFGLEAVLDPAL--KAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAER 461
++W S + Y PHG VH++ GG + C E +DAL PL +DR+ ++ + + HKN YR L C C CP+ E + A +LK + ++ D L + + A+CNS +GD+LQ+S+S+ P FW +H ER
Sbjct: 238 EEWLS---KVSYGPHGPVHIMAGGMLQCQEVWDALYPL--GWDRAT-VDYYKGFHFGFHKNAYRYGVLSCEDV--CYCPEFETYMRDEKALGA---MLKQMGVVLVDGYSDYTLDQRKAIANAICNSGAVNGDNLQASSSFTPEFWPIHGLIER 380
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S2FM18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM18_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.090e-12 Identity = 69/272 (25.37%), Postives = 120/272 (44.12%), Query Frame = 3
Query: 6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLD----CSG-------AGGCACPDEE----ELLSAVNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKR-GGTVAAKVHRGGGGGLFGGEWPDPPYFQPYE-EYCTGHAADDKVLFGMHPLLDLSSGEK---TQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGV 761
D W FG L Y+PH RVH ++GG+ + +A F++ + E++ + + KN++R +D CS G C+ +E ++ S +N T D ++ ++ LE ++ +V A+C S L GD ++S++ D +FW +H ER+ K+ GT + WP + + C GH ++D L M ++ + G + T T EW L+ P +PY+YD +C Y +
Sbjct: 136 DSWFDFGWGLQYDPHARVHSVIGGSEAGTSFENNVAKHFDD----DVNEIISKIMFVWTKNMWRNYKIDFPTVCSPDTPQHACVGSCSDIGDEIQNRDIESYIN-TFGDSTVISSIKSLVLEDQIE------VVTAMCESSLCIGDQMESASPTDISFWPIHPNLERVWMIKKLSGTFTDE------------SWPQNSTSKSSDGSTCYGHGSED--LLPMEGIVSGTEGVEWNATNLTNSEWYRLLDPLNGHMPYLYDDFTLKHCNFYNL 382
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Match: A0A7S2CAB6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAB6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 4.410e-12 Identity = 72/271 (26.57%), Postives = 117/271 (43.17%), Query Frame = 3
Query: 6 DDWASFGKYLMYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKNLYRGQYLD----CSG-------AGGCACPD---EEELLSAVNGTSADEFLLKALPGFGLEAVLDPALKAPLVRALCNSRLADGDSLQSSASWDPAFWLVHAAAERMVAAKRGGTVAAKVHRGGGGGLFGGEWPDPPYFQPYEEY----CTGHAADDKVLFG-MHPLLDLSSGEKTQPTVKEWAELVGPGGAELPYVYDTLDWDYCQDYGV 761
D W FG + Y PH RVH ++GG+ + FD L+ F+E LE + + ++ KNL+R ++ CS G C D ++ +A T DE ++ A G D KA + ALC + L+ GD ++S++ D +FW +H ER+ K+ + WP+ + C GH D + +G ++ +D + + T K L+ P ++LPYVYD +CQ Y +
Sbjct: 297 DTWFDFGWAMPYNPHARVHSVIGGSES-GPSFDVLSDYFDE----TILEDISKLQFSWTKNLWRNYKIEFPSYCSSDTPQHQCTGSCTFLDLAHKKGSFAAYIDTFGDEVVIAAFNTLGN----DDQYKA--LGALCENGLSIGDQMESASPADISFWPIHPNLERIWMIKKLSSTFQNE-----------SWPETGTSLATDTTASGECYGHGPYDLLPYGDIYGSMDNLADKNNNLTNKGLYNLMDPMNSDLPYVYDDFSLKHCQHYDI 545 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig84.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig84.20.1 >prot_H-akashiwo_Contig84.20.1 ID=prot_H-akashiwo_Contig84.20.1|Name=mRNA_H-akashiwo_Contig84.20.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=255bp MYEPHGRVHVLLGGAVNCAEEFDALAPLFEEYDRSEKLELLRAMAYAAHKback to top mRNA from alignment at H-akashiwo_Contig84:620290..625400- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig84.20.1 ID=mRNA_H-akashiwo_Contig84.20.1|Name=mRNA_H-akashiwo_Contig84.20.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5111bp|location=Sequence derived from alignment at H-akashiwo_Contig84:620290..625400- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig84:620290..625400- >mRNA_H-akashiwo_Contig84.20.1 ID=mRNA_H-akashiwo_Contig84.20.1|Name=mRNA_H-akashiwo_Contig84.20.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=765bp|location=Sequence derived from alignment at H-akashiwo_Contig84:620290..625400- (Heterosigma akashiwo CCMP452)back to top |