mRNA_H-akashiwo_Contig807.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig807.4.1
Unique NamemRNA_H-akashiwo_Contig807.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: B2XTA7_HETAK (ATP synthase subunit beta, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTA7_HETAK)

HSP 1 Score: 473 bits (1217), Expect = 4.310e-161
Identity = 295/490 (60.20%), Postives = 324/490 (66.12%), Query Frame = 1 
Query:    1 MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIWN*LINC*SAWWCFRIWGCR*TNS*RK*LI*RNERIWCN**TEFTRIKSSVSL---WTNE----RATWGKNACR----FNSVNNG*IFPRCK*TRRFTFYR*YFPFCTSWFRSFCTI----RSYAFSRRLSTNFSNRNGCITRTYY--IYNTRFNYFYSSSLCTCR*FN*PSTSNNICALRCNYSIITWLSSERYLSSC*SIRININNVTKKHCW*ITLCNSPSSSKTLQRYKELQDIIAILGIDELSEEDRLLVARARKVERFLSQPFFVAEIFTGAPGKYVPLEETIKGFQMILKGELDELPEQSFYLVGDIQEVITKSKNL 1419
            MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLI   + N   A     ++G     + R+      E        +    +S V+L     NE    R   G  A      F  VN   +           F    F F  +       +     +  +   L+T        IT T    I + +  Y  +  L        P+ +     L     +   L+++    +   +      + K     +    + +  KTLQRYKELQDIIAILGIDELSEEDRLLVARARKVERFLSQPFFVAEIFTGAPGKYVPLEETIKGFQMILKGELDELPEQSFYLVGDIQEVITKSKNL
Sbjct:    1 MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT-REGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVL---------LFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTD------PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKTLQRYKELQDIIAILGIDELSEEDRLLVARARKVERFLSQPFFVAEIFTGAPGKYVPLEETIKGFQMILKGELDELPEQSFYLVGDIQEVITKSKNL 474
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: H6X0V8_9ASTE (H(+)-transporting two-sector ATPase (Fragment) n=9 Tax=Kirengeshoma TaxID=39203 RepID=H6X0V8_9ASTE)

HSP 1 Score: 417 bits (1072), Expect = 2.400e-139
Identity = 248/465 (53.33%), Postives = 295/465 (63.44%), Query Frame = 1 
Query:   25 GYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGT-----IVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIWN*LINC*SAWWCFRIWGC--R*TNS*RK*LI*RNERIWCN**TEFTRIKSSVSLWTNE--RATWGKNACRFNSVNNG*IFPRCK*TRRFTFYR*YFPFCTSWFRSFCTIRSYAFSRRLSTNFSNRNGCITRTYYIYNTRFNYFYSSSLCTCR*FN*PSTSNNICALRCNYSIITWLSSERYLSSC*SIRININNVTKKHCW*ITLCNSPSS-SKTLQRYKELQDIIAI-LGIDELSEEDRLLVARARKVERFLSQPFFVAEIFTGAPGKYVPLEETIKGFQMILKGELDELPEQSFYLVGD 1386
            G   QIIGPVLD+AFP GK+P IYNA+ VK    T     + CEVQQLLG+NRV+AVAMS+TDGL RG   +DTGAP+SVPVG  TLGRIFNVLG PVD LG V++ T T PIHR APAF +L+TK SIFETGIKVV+LLAPYRRGGKIGLFGGAGVGKTVLI   + N   A     ++G     T       +   E    N   E    +S V+L   +       +      ++    IFPRC  TRR + YR Y PF  S  RS   I   AF   +ST+   RNG  TR  Y Y  R + FYSSSLCTCR F+ P +  +IC  RC Y  I  +  +RYLSS  S R N+N  +  + W  TL N   S +  +Q         +  LG+DELSEEDRL VARARK+ERFLSQPFFVAE+FTG+PGKYV L ETI+GF +IL GELD LPEQ+FYLVG+
Sbjct:    1 GRITQIIGPVLDVAFPPGKMPNIYNALVVKGQDTTGQPINVTCEVQQLLGNNRVKAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVNTRT-TSPIHRCAPAFIQLDTKLSIFETGIKVVNLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN---EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAVIFPRCLSTRRTSIYRQYLPFRPSRIRSIRLIGLNAFRCGISTHSLYRNGFFTRKNYFYLRRVHNFYSSSLCTCRRFDSPGSCYDICTFRCYYRTIKRIGCQRYLSSSRSFRFNVNYASTSYRWSGTLSNCAKSLANFIQGLPRTSGHYSYRLGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFHLILSGELDSLPEQAFYLVGN 461
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: A0A7T7DAA8_9STRA (ATP synthase subunit beta (Fragment) n=3 Tax=Chattonella TaxID=44439 RepID=A0A7T7DAA8_9STRA)

HSP 1 Score: 387 bits (995), Expect = 1.890e-129
Identity = 203/216 (93.98%), Postives = 208/216 (96.30%), Query Frame = 2 
Query:  515 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKHYNVIKNYKIL 1162
            IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVIN+ NLPESKVALVYGQMNEPPGARMRVGLTALTMAE+FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPLESTSTMLQKSIVG+LHYATAQAVQK    ++ YK L
Sbjct:   84 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINQSNLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQKSIVGDLHYATAQAVQK---TLQRYKEL 296
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: A0A0H5B5Q6_9PHAE (ATP synthase subunit beta (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A0H5B5Q6_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 2.450e-124
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 2 
Query:  515 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQK 1129
            IAKAHGGVSVFGGVGERTREGNDLY EMKESGVIN++NLPESKVALVYGQMNEPPGARMRVGLTALTMAE+FRD+N+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL+STSTMLQ  IVG+ HY TAQ V+K
Sbjct:   36 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDQHYQTAQLVKK 240
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: A0A1R3L3N5_9ROSI (ATP-synt_ab domain-containing protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3L3N5_9ROSI)

HSP 1 Score: 371 bits (953), Expect = 2.470e-124
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 2 
Query:  515 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKHYNVIKNYKIL 1162
            IAKAHGGVSVFGGVGERTREGNDLY EMKESGVIN+QN+ ESKVALVYGQMNEPPGARMRVGLTALTMAE+FRDVN+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL+TEMG LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL+STSTMLQ  IVGE HY TAQ+V++  +V KN++ L
Sbjct:   46 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEQHYETAQSVKQTLHVTKNFRTL 261
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: A0A6S7KQA2_LACSI (ATP synthase subunit beta n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7KQA2_LACSI)

HSP 1 Score: 367 bits (943), Expect = 6.310e-123
Identity = 201/252 (79.76%), Postives = 218/252 (86.51%), Query Frame = 2 
Query:  515 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKHYNVIKNYKILLQF*VLMNYLKRIVY**RVPV----KLSASYLNLSL 1258
            IAKAHGGVSVFGGVGERTREGNDLY EMKESGVIN++N+PESKVALVYGQMNEPPGARMRVGLTALTMAE+FRDVN+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL+TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL+STSTMLQ  IVGE HY TAQ V++    ++ YK L     ++  L  +    R+ V    KLS SY NL L
Sbjct:    7 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQEVKQ---TLQRYKELQDIIAILG-LDELSEEDRLTVARARKLSVSYHNLFL 254
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: ATPB_PORPU (ATP synthase subunit beta, chloroplastic n=18 Tax=Eukaryota TaxID=2759 RepID=ATPB_PORPU)

HSP 1 Score: 375 bits (964), Expect = 7.430e-123
Identity = 246/493 (49.90%), Postives = 292/493 (59.23%), Query Frame = 1 
Query:    1 MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIWN*LINC*SAWWCFRIWGC--R*TNS*RK*LI*RNERIWCN**TEFTRIKSSVSL---WTNE----RATWGKNACR----FNSVNNG*IFPRCK*TRRF-------TFYR*YFPFCTSWFRSFCTIRSYAFSRRLSTNFSNRNGCITRTYYIYNTRFNYFYSSSLCTCR*FN*PSTSNNICALRCNYSIITWLSSERYLSSC*SIRININNVTKKHCW*ITLCNSPSSSKTLQRYKELQDIIAILGIDELSEEDRLLVARARKVERFLSQPFFVAEIFTGAPGKYVPLEETIKGFQMILKGELDELPEQSFYLVGDIQEVITKSKNL 1419
            M +T +S G   QIIGPVLDIAFP+G+LPK++NA++V+S  GTI CEVQQLLGDN+VRAV+MSST+GLKRG   VDTGAPISVPVGT TLGRIFNVLG PVD LG V S + TLPIHR APAFT+LETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLI   + N   A     ++G     T       +   E    N   E    +S V+L     NE    R   G  A      F  +N   +        RF       +      P    +  +  T       R  ST      G IT    +Y    +    +   T    +  +  +   A +  Y  +  L S        S  +    V   H        +     TLQRYKELQDIIAILG+DELSEEDR  V+RARK+ERFLSQPFFVAE+FTG+PGKYV LE+ IKGFQMILKGELD+LPEQ+FYLVGDI E I K+ ++
Sbjct:    1 MVSTTKSTGSVTQIIGPVLDIAFPNGQLPKVFNALKVQSTDGTITCEVQQLLGDNKVRAVSMSSTEGLKRGVEVVDTGAPISVPVGTNTLGRIFNVLGEPVDNLGPVSSES-TLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN---EDNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTT----EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDST-------STMLQPGIVGTDH-----YSTAQEVKSTLQRYKELQDIIAILGLDELSEEDRQTVSRARKIERFLSQPFFVAEVFTGSPGKYVSLEDAIKGFQMILKGELDDLPEQAFYLVGDIDEAIQKADSM 473
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: A0A7T7IGP2_9STRA (ATP synthase subunit beta n=1 Tax=Nematochrysopsis sessilis var. vectensis TaxID=2797601 RepID=A0A7T7IGP2_9STRA)

HSP 1 Score: 375 bits (962), Expect = 1.530e-122
Identity = 248/491 (50.51%), Postives = 293/491 (59.67%), Query Frame = 1 
Query:    1 MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIWN*LINC*SAWWCFRIWGCR*TNS*RK*LI*RNERIWCN**TEFTRIKSSVSL---WTNE----RATWGKNACR----FNSVNNG*IFPRCK*TRRF-------TFYR*YFPFCTSWFRSFCTIRSYAFSRRLSTNFSNRNGCITRTYYIYNTRFNYFYSSSLCTCR*FN*PSTSNNICALRCNYSIITWLSSERYLSSC*SIRININNVTKKHCW*ITLCNSPSSSKTLQRYKELQDIIAILGIDELSEEDRLLVARARKVERFLSQPFFVAEIFTGAPGKYVPLEETIKGFQMILKGELDELPEQSFYLVGDIQEVITKSKNL 1419
            M  T   +GY  QIIGPVLDI FPSG LP IYNAI V++ +G IVCEVQQLLGDN+VRAV+MS+TDGL+RG  A+DTGAPI+VPVG  TLGRIFNVLG PVDELGDVD  + T PIHR APAFT+LET+PSIFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLI   + N   A     ++G     + R+      E        E    +S V+L     NE    R   G +A      F  VN   +        RF       +      P    +  +  T       R  ST      G IT    +Y    +    +   T    +  +  +   A +  Y  +  L S        S  +    V  +H        +    +TLQRYKELQDIIAILGIDELSEEDRL+VARARK+ERFLSQPFFVAEIFTG+PGKYV LEETIKGF M+L GELD+LPEQ+FYLVGDI EVI K+  L
Sbjct:    1 MTATKFGVGYVTQIIGPVLDITFPSGNLPAIYNAINVQAKNGIIVCEVQQLLGDNKVRAVSMSATDGLQRGVDAIDTGAPINVPVGVCTLGRIFNVLGEPVDELGDVD-RSVTFPIHRPAPAFTDLETQPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT-REGNDLYMEMKESGVIKENNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTT----KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST-------STMLQRAIVGDEH-----YDTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVARARKIERFLSQPFFVAEIFTGSPGKYVSLEETIKGFLMVLGGELDDLPEQAFYLVGDINEVIAKAATL 473
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: Q8MFV0_SEQSE (ATP synthase subunit beta (Fragment) n=1 Tax=Sequoia sempervirens TaxID=28980 RepID=Q8MFV0_SEQSE)

HSP 1 Score: 367 bits (941), Expect = 1.620e-122
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 2 
Query:  515 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKHYNVIKNYKIL 1162
            IAKAHGGVSVFGGVGERTREGNDLY+EMKESGVIN+QN+ ESKVALVYGQMNEPPGARMRVGLTALTMAE+FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL+TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP +STSTMLQ SIVGE HY TAQ V++    ++ YK L
Sbjct:   20 IAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPXDSTSTMLQPSIVGEEHYDTAQGVKQ---TLQRYKEL 232
[Close]
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Match: A0A7T7IGV2_9STRA (ATP synthase subunit beta (Fragment) n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7IGV2_9STRA)

HSP 1 Score: 369 bits (948), Expect = 5.630e-122
Identity = 194/216 (89.81%), Postives = 202/216 (93.52%), Query Frame = 2 
Query:  515 IAKAHGGVSVFGGVGERTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKHYNVIKNYKIL 1162
            IAKAHGGVSVFGGVGERTREGNDLY EMKESGVI   NLPESKVALVYGQMNEPPGARMRVGL+ALTMAE+FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL+STSTMLQ+SIVG  HY TAQ V++    ++ YK L
Sbjct:  108 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIKADNLPESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQQSIVGSEHYKTAQLVKE---TLQRYKEL 320
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig807.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B2XTA7_HETAK4.310e-16160.20ATP synthase subunit beta, chloroplastic n=2 Tax=H... [more]
H6X0V8_9ASTE2.400e-13953.33H(+)-transporting two-sector ATPase (Fragment) n=9... [more]
A0A7T7DAA8_9STRA1.890e-12993.98ATP synthase subunit beta (Fragment) n=3 Tax=Chatt... [more]
A0A0H5B5Q6_9PHAE2.450e-12492.68ATP synthase subunit beta (Fragment) n=2 Tax=Ochro... [more]
A0A1R3L3N5_9ROSI2.470e-12488.43ATP-synt_ab domain-containing protein n=1 Tax=Corc... [more]
A0A6S7KQA2_LACSI6.310e-12379.76ATP synthase subunit beta n=1 Tax=Lactuca saligna ... [more]
ATPB_PORPU7.430e-12349.90ATP synthase subunit beta, chloroplastic n=18 Tax=... [more]
A0A7T7IGP2_9STRA1.530e-12250.51ATP synthase subunit beta n=1 Tax=Nematochrysopsis... [more]
Q8MFV0_SEQSE1.620e-12288.43ATP synthase subunit beta (Fragment) n=1 Tax=Sequo... [more]
A0A7T7IGV2_9STRA5.630e-12289.81ATP synthase subunit beta (Fragment) n=5 Tax=Ochro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig807contigH-akashiwo_Contig807:2634..4052 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog130081.XP_005705031.1
Preferred nameATP5D
PFAMsATP-synt_DE,ATP-synt_DE_N,ATP-synt_ab,ATP-synt_ab_N
Model size1419
Max annot lvl2759|Eukaryota
KEGG koko:K02112,ko:K02114,ko:K02133,ko:K02134,ko:K14573
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko03008,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map03008,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158
Hectar predicted targeting categoryother localisation
GOsGO:0000275,GO:0002376,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005754,GO:0005756,GO:0005759,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008150,GO:0008152,GO:0008270,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009544,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009814,GO:0009817,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010287,GO:0010319,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031977,GO:0031984,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0042221,GO:0042407,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042776,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0044877,GO:0045087,GO:0045259,GO:0045261,GO:0045267,GO:0045269,GO:0046034,GO:0046390,GO:0046483,GO:0046688,GO:0046689,GO:0046872,GO:0046907,GO:0046914,GO:0046933,GO:0050832,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055035,GO:0055085,GO:0055086,GO:0061024,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098542,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098807,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
Exons1
Evalue2.09e-75
EggNOG OGsCOG0055@1|root,COG0355@1|root,KOG1350@2759|Eukaryota,KOG1758@2759|Eukaryota
EC3.6.3.14
Descriptionproton-transporting ATP synthase activity, rotational mechanism
Cds size507
COG categoryC
BiGG ReactioniMM904.YDL004W,iND750.YDL004W
BRITEko00000,ko00001,ko00002,ko00194,ko01000,ko03009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387991.5841959-UTR-H-akashiwo_Contig807:2633..35451681387991.5841959-UTR-H-akashiwo_Contig807:2633..3545Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig807 2634..3545 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387991.6021488-CDS-H-akashiwo_Contig807:3545..40521681387991.6021488-CDS-H-akashiwo_Contig807:3545..4052Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig807 3546..4052 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig807.4.1prot_H-akashiwo_Contig807.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig807 3546..4052 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig807.4.1

>prot_H-akashiwo_Contig807.4.1 ID=prot_H-akashiwo_Contig807.4.1|Name=mRNA_H-akashiwo_Contig807.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=169bp
MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQ
LLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVP
VDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGG
KIGLFGGAGVGKTVLIWN*
back to top

mRNA from alignment at H-akashiwo_Contig807:2634..4052-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig807.4.1 ID=mRNA_H-akashiwo_Contig807.4.1|Name=mRNA_H-akashiwo_Contig807.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1419bp|location=Sequence derived from alignment at H-akashiwo_Contig807:2634..4052- (Heterosigma akashiwo CCMP452)
ATGGCAACAACAAACGAATCAATTGGGTACACTTGTCAAATTATTGGCCC
AGTATTAGATATTGCTTTTCCATCTGGAAAATTACCAAAAATTTACAATG
CAATTGAAGTTAAAAGTGACTCTGGAACAATTGTTTGTGAAGTTCAACAA
TTATTAGGTGATAATCGTGTGCGTGCTGTTGCAATGAGTTCAACAGATGG
TTTAAAGCGCGGTTCAACAGCAGTTGATACAGGAGCCCCAATTAGTGTAC
CTGTAGGTACTCAAACGCTTGGTAGAATTTTTAATGTGTTAGGAGTTCCA
GTTGATGAATTAGGAGATGTTGATAGTAATACTGCAACATTGCCAATTCA
TAGAACAGCACCTGCATTTACAGAGTTAGAAACAAAGCCATCAATTTTTG
AAACTGGTATTAAAGTTGTAGATTTATTAGCTCCATATCGTCGTGGTGGA
AAAATTGGTTTATTTGGTGGTGCTGGTGTAGGTAAAACTGTATTAATATG
GAATTAATTAATAAATTGCTAAAGCGCATGGTGGTGTTTCCGTATTTGGG
GGTGTAGGTGAACGAACTCGTGAAGGAAATGACTTATATGAAGAAATGAA
AGAATCTGGTGTAATTAATAAACAGAATTTACCAGAATCAAAAGTAGCGT
TAGTTTATGGACAAATGAACGAGCCACCTGGGGCAAGAATGCGTGTAGGT
TTAACAGCGTTAACAATGGCTGAATTTTTCCGAGATGTAAATAAACAAGA
CGTTTTACTTTTTATCGATAATATTTTCCGTTTTGTACAAGCTGGTTCAG
AAGTTTCTGCACTATTAGGTCGTATGCCTTCAGCCGTAGGTTATCAACCA
ACTTTAGCAACAGAAATGGGTGCATTACAAGAACGTATTACATCTACAAC
ACAAGGTTCAATTACTTCTATTCAAGCAGTTTATGTACCTGCAGATGATT
TAACTGACCCAGCACCAGCAACAACATTTGCGCACTTAGATGCAACTACA
GTATTATCACGTGGCTTAGCAGCGAAAGGTATCTATCCAGCTGTTGATCC
ATTAGAATCAACATCAACAATGTTACAAAAAAGCATTGTTGGTGAATTAC
ATTATGCAACAGCCCAAGCAGTTCAAAAACATTACAACGTTATAAAGAAT
TACAAGATATTATTGCAATTTTAGGTATTGATGAATTATCTGAAGAGGAT
CGTTTATTAGTAGCGCGTGCCCGTAAAGTTGAGCGCTTCTTATCTCAACC
TTTCTTTGTTGCAGAAATCTTTACAGGTGCCCCTGGTAAATATGTTCCGT
TAGAAGAAACAATTAAAGGTTTCCAAATGATTTTAAAAGGCGAATTAGAT
GAATTACCAGAACAATCATTCTATCTTGTTGGTGACATTCAAGAAGTAAT
TACAAAATCTAAAAATCTA
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig807:2634..4052-

>mRNA_H-akashiwo_Contig807.4.1 ID=mRNA_H-akashiwo_Contig807.4.1|Name=mRNA_H-akashiwo_Contig807.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=507bp|location=Sequence derived from alignment at H-akashiwo_Contig807:2634..4052- (Heterosigma akashiwo CCMP452)
ATGGCAACAACAAACGAATCAATTGGGTACACTTGTCAAATTATTGGCCC
AGTATTAGATATTGCTTTTCCATCTGGAAAATTACCAAAAATTTACAATG
CAATTGAAGTTAAAAGTGACTCTGGAACAATTGTTTGTGAAGTTCAACAA
TTATTAGGTGATAATCGTGTGCGTGCTGTTGCAATGAGTTCAACAGATGG
TTTAAAGCGCGGTTCAACAGCAGTTGATACAGGAGCCCCAATTAGTGTAC
CTGTAGGTACTCAAACGCTTGGTAGAATTTTTAATGTGTTAGGAGTTCCA
GTTGATGAATTAGGAGATGTTGATAGTAATACTGCAACATTGCCAATTCA
TAGAACAGCACCTGCATTTACAGAGTTAGAAACAAAGCCATCAATTTTTG
AAACTGGTATTAAAGTTGTAGATTTATTAGCTCCATATCGTCGTGGTGGA
AAAATTGGTTTATTTGGTGGTGCTGGTGTAGGTAAAACTGTATTAATATG
GAATTAA
back to top