mRNA_H-akashiwo_Contig8.80.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A7S2V5P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P0_9STRA) HSP 1 Score: 266 bits (680), Expect = 3.280e-84 Identity = 147/255 (57.65%), Postives = 184/255 (72.16%), Query Frame = 1 Query: 19 QMSKLGSIAVFAMLAFGFASAFQRSTVFSTTQTM-MRSGRGQLEM-YDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDP 777 +M + + F M+ S S +T ++ + + R QLEM Y K+FVAGA +GVG+ +VE+L ++ +VVAFVRREE+K EL L GVTAI+GDAL QK VE AMDGCDAAVTTLG+ P D + K DY GNVNV E+AGILGVTR ILVTS+GCG+S+ A+S + Y+ LE AL AK+KAE+ LT+YYTNSDWTVIRPGGL + AT AVLTEN A G+I R DVA LV +AL++ T RKV TA+DP Sbjct: 19 KMKFISTALAFIMMVISCESFRTPSIQIATRKSSNLNANRAQLEMAYKKVFVAGAAKGVGRQIVEQLVAKDVEVVAFVRREEAKQELGGLKGVTAILGDALVQKDVEGAMDGCDAAVTTLGSAPTDEQRWKVDYDGNVNVIEAAGILGVTRCILVTSVGCGDSKEAVSPDAYEKLENALKAKEKAERVLTKYYTNSDWTVIRPGGLMNGEATSAAVLTENKMACGVINRADVASLVVKALDSQKTFRKVLTAVDP 273
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: D7FJ06_ECTSI (Epimerase/dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ06_ECTSI) HSP 1 Score: 262 bits (669), Expect = 1.500e-82 Identity = 128/220 (58.18%), Postives = 167/220 (75.91%), Query Frame = 1 Query: 151 YDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQK 810 Y K+FVAG +GVG+ +++KL QG +VVA VRRE++K ELE + GV+A++ DAL+ K VE +DGCDAA+TTLG PE + DY GN NV ESAGILG+TRV++VTS+GCG SR AISD+VY+VLE AL AK AE L +YYTNS+WT+IRPGGL + ATG A+LTE+T A G+I R DVADL +AL +P+T RK+ TA+DP++ S+Y +K Sbjct: 48 YGKVFVAGGAKGVGRAVIDKLVDQGSEVVALVRREDAKDELEAIKGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDESKRVDYAGNRNVIESAGILGITRVVMVTSVGCGSSREAISDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTEDTKAAGVINRADVADLAVQALNSPSTVRKILTAVDPAVQSSYDSAEK 267
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A835Z825_9STRA (Epimerase/dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z825_9STRA) HSP 1 Score: 258 bits (659), Expect = 3.360e-81 Identity = 132/220 (60.00%), Postives = 169/220 (76.82%), Query Frame = 1 Query: 151 YDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQK 810 Y+K+FVAG GVG+ +V +L S+GKQVVA VRRE++ EL + GVTA++ DAL+ K VE A+DGCDAA+TTLG + + ++ DY GN NV ESAGILGVTRVILVTS+GCG+SR AISD+VY LE AL AK KAEK L +YYTN+ WT+IRPGGL TG+A+LTEN + G+IRR DVAD+V RAL+ TH+KV+TA+DPS+PS++ + K Sbjct: 40 YNKVFVAGGSSGVGREVVNQLVSKGKQVVAIVRREDALEELNAIEGVTAVMVDALDLKGVEGALDGCDAAITTLGGSSGE---NRVDYEGNRNVIESAGILGVTRVILVTSVGCGDSRGAISDQVYTSLEKALVAKTKAEKMLQKYYTNAFWTIIRPGGLQTAEGTGKAILTENKTIAGIIRRADVADVVVRALDNDGTHKKVFTAVDPSIPSSFGDASK 256
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: B7FVE3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVE3_PHATC) HSP 1 Score: 257 bits (656), Expect = 1.120e-80 Identity = 141/254 (55.51%), Postives = 178/254 (70.08%), Query Frame = 1 Query: 49 FAMLAFGFASAFQRSTVFSTTQTMMRSGRGQLEMYDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQK 810 FA++ A ++ F TT+ + S L+ Y K+FVAG RGVG+ +V++L QG +VVA VR E++ EL + GVTAI GDA EQKAVENAMDGCDAA+TTLG D K + DY GN NV ESAGILGVTRVILVTS+GCG S+ A V++ L+ LTAK+KAE L +YYTN +WT+IRPGGL EPATG+A+LTE+T A G I R DVA L +AL + T RKV TA+DPS+ SA S+G++ Sbjct: 11 FALVGVTSAFVAPKAPTFGTTRFPVSST--SLDAYKKVFVAGGTRGVGRCIVDQLLGQGSEVVALVRSEDALKELNAIEGVTAIRGDAFEQKAVENAMDGCDAAITTLGGATSDGGK-RVDYDGNSNVIESAGILGVTRVILVTSVGCGSSKEAAPPNVFEALKEVLTAKEKAENVLIKYYTNMNWTIIRPGGLKSEPATGKAILTEDTRAIGTIHREDVAALAIKALNSSNTERKVLTAIDPSIDSAVSDGKQ 261
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A7S4AAV3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAV3_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.320e-78 Identity = 130/222 (58.56%), Postives = 165/222 (74.32%), Query Frame = 1 Query: 151 YDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQKEL 816 Y K+FVAG +GVG +VEKLS++G +VVA VR EESKTEL + GVTAI+GDA QK VENAMDGCDAA+TTLG T D + DY GN NV ESAGILGV R++LVTS+GCG S+ A V+++L+ L AK+KAE L +YTNS+W++IRPGGL EP TG+A+LTE+T+A G I R DVADLV RA+++P T R V +A+DPS+ S + KE+ Sbjct: 63 YKKVFVAGGSKGVGHAIVEKLSARGTEVVALVRSEESKTELNSMSGVTAILGDAFNQKDVENAMDGCDAAITTLGGTAAD---RRVDYEGNNNVIESAGILGVQRILLVTSVGCGSSKGAAPPNVFEILKDVLAAKEKAENVLIEWYTNSNWSIIRPGGLVSEPMTGKAILTEDTTAIGSIHREDVADLVIRAMDSPKTERVVLSAVDPSIASQVAVKGKEI 281
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A7S3L6R6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6R6_9STRA) HSP 1 Score: 251 bits (640), Expect = 2.530e-78 Identity = 126/218 (57.80%), Postives = 161/218 (73.85%), Query Frame = 1 Query: 151 YDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEG 804 Y +FVAG +GVG+L+++KL QG +VVA VR+EE +L + GVTAI+GDA +QK VENAMDGCDAA+TTLG + +DT + DY GN NV ESAGILGV R+ILVTS+GCG S+ A + V++ L+ L AK+KAE L +YYTNS+W++IRPGGL EPATG A+LTE+ G I R DVA LV R LE+P T RK+ TA+DPS+ SA + G Sbjct: 39 YKNVFVAGGSKGVGRLVIDKLLEQGSKVVALVRKEEVAADLNSIEGVTAIVGDAFDQKTVENAMDGCDAAITTLGGSTQDTGA-RIDYAGNSNVIESAGILGVQRIILVTSVGCGSSKEAAPEAVFEALKEVLLAKEKAENVLIKYYTNSNWSIIRPGGLKSEPATGNAILTEDNKTIGTIHREDVASLVVRCLESPKTERKILTAIDPSIESAVATG 255
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: B8C036_THAPS (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C036_THAPS) HSP 1 Score: 249 bits (637), Expect = 1.090e-77 Identity = 137/257 (53.31%), Postives = 175/257 (68.09%), Query Frame = 1 Query: 52 AMLAFGFASAFQRSTVFSTTQTMMRSGRGQLEMYDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHK-ADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQKELD 819 A AF + QR T ++ + +GQ + Y K+FVAG +GVG+L+V+KL S G +VVA VR +E+ EL L GVTAI GDA++ K VE AMDGCDAA+TTLG K DY GN NV E+AGILGVTRV+LVTS+GCG S+ A VY+VL+ L K+KAEK LTRYYTN +WT++RPGGL EP TG+AVLTE+T A G I RGDVADLV +AL + T +K+ +A+DPS+ SA + K + Sbjct: 15 ASSAFAPTAFVQRVAPAPTQRSALYMVQGQGDSYKKVFVAGGSKGVGRLVVDKLVSNGAEVVALVRSDEAVDELSALDGVTAIKGDAMDYKTVEGAMDGCDAAITTLGGGHNVAEGEKYVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEATPPSVYEVLKDVLVQKEKAEKVLTRYYTNMNWTIVRPGGLVSEPPTGKAVLTEDTMAIGSIHRGDVADLVVKALSSKNTEKKILSAVDPSIESASNPEGKTCE 271
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A1Z5JK00_FISSO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK00_FISSO) HSP 1 Score: 245 bits (626), Expect = 3.140e-76 Identity = 131/247 (53.04%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 91 STVFSTTQTMMRSGRGQLEMYDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQKELDPVPL 831 ++ F+ T R L Y+K+FVAG RGVG+ LV++L + G+QVVA VR+EE L L G TAI+GDA +QK VENAMDGCDAA+TTLG + D + + DY GN NV ESAGILGVTRVILVTS+GCG S+ A V++ L+ L AK+KAE L +YYTN +WT++RPGGL EPATG+A+LTE+ +A G I R DVA LV +AL+A T +K+ +A+DPS+ S+ S K ++ L Sbjct: 16 TSAFTMTPPSTRGSSTALTAYNKVFVAGGSRGVGRCLVDQLIASGRQVVALVRKEEDAGLLNALEGCTAIVGDAFDQKTVENAMDGCDAAITTLGGSTADQGQ-RIDYDGNNNVIESAGILGVTRVILVTSIGCGSSKEAAPPNVFEALKPVLLAKEKAENILIKYYTNMNWTIVRPGGLKSEPATGKAILTEDNTAIGSIHREDVAALVIQALDAANTEKKILSAVDPSITSSVSMEGKTVEEFAL 261
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A7S2UDM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDM5_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.780e-74 Identity = 135/267 (50.56%), Postives = 180/267 (67.42%), Query Frame = 1 Query: 22 MSKLGSIAVFAMLAFGFASAFQRSTVF--STTQTMMRSGRGQLEM--------YDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSA 792 M +L +A A+LA G SAF ++ F TT + + L M Y+K+FVAG +GVG+L+V+KL G VVA VR EE+ EL L GVTA+IGDA + KAVE AMDGCDAA++TLG + K + DY GN NV E+AGILGVTRV+L+TS+GCG S+ A V++VL+ L+AK++AE L +YYTN++WT+IRPGGL EPATG+A+LTE+ A G I R DVA L +AL +P T +K+ +A+DP + SA Sbjct: 1 MLRLLPLAAAALLA-GVCSAFVPASTFVSRTTASSAKKSYSSLYMVEGQGGQTYNKVFVAGGSKGVGRLVVDKLVGSGTGVVALVRSEEAAAELNALDGVTAVIGDAFDYKAVEGAMDGCDAAMSTLGGGTVEEGKQRVDYEGNSNVIEAAGILGVTRVVLITSIGCGSSKEAAPPSVFEVLKDVLSAKERAENILIKYYTNTNWTIIRPGGLKSEPATGKAILTEDNMAIGSIHREDVAALAIQALTSPKTKQKILSAVDPEITSA 266
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Match: A0A7S2HK64_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK64_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.600e-74 Identity = 136/272 (50.00%), Postives = 177/272 (65.07%), Query Frame = 1 Query: 22 MSKLGSIAVFAMLAFGFAS-AFQRSTVFSTTQTMMRSGRG-QLEMYDKIFVAGAGRGVGKLLVEKLSSQGKQVVAFVRREESKTELEKLPGVTAIIGDALEQKAVENAMDGCDAAVTTLGTTPEDTVKHKADYTGNVNVFESAGILGVTRVILVTSLGCGESRAAISDEVYKVLEGALTAKQKAEKALTRYYTNSDWTVIRPGGLSHEPATGQAVLTENTSAGGMIRRGDVADLVARALEAPATHRKVYTALDPSLPSAYSEGQKELDPVPL 831 +S LG+ L FA AF S ST + S L+ Y K+FVAG +GVG+L+V+KL G +VVA VR +E+ EL + GVT I+GDA E K VENAMDGCDAA+TTLG + DY GN NV E+AGILGVTRVILVTS+GCG S+ A V++VL+ L AK++AE L +YYTN++WT++RPGGL EPATG+A+LTE+ A G I R DVA L+ +AL + T RKV +A+D S+PSA + + +D L Sbjct: 9 LSALGAALFSCQLVASFAPPAFLGSRRTSTQASGSSSATTTSLDAYKKVFVAGGSKGVGRLIVDKLIEDGSEVVALVRSQEAVDELGAIDGVTPILGDAFEYKNVENAMDGCDAAITTLGQGSATEDGKRVDYEGNSNVIEAAGILGVTRVILVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNTNWTIVRPGGLKSEPATGEAILTEDAMAIGSIHREDVASLIVKALTSSKTERKVLSAVDQSIPSASNVEGRVVDEFAL 280 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig8.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig8.80.1 >prot_H-akashiwo_Contig8.80.1 ID=prot_H-akashiwo_Contig8.80.1|Name=mRNA_H-akashiwo_Contig8.80.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=271bp MSKLGSIAVFAMLAFGFASAFQRSTVFSTTQTMMRSGRGQLEMYDKIFVAback to top mRNA from alignment at H-akashiwo_Contig8:3927092..3928236+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig8.80.1 ID=mRNA_H-akashiwo_Contig8.80.1|Name=mRNA_H-akashiwo_Contig8.80.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1145bp|location=Sequence derived from alignment at H-akashiwo_Contig8:3927092..3928236+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig8:3927092..3928236+ >mRNA_H-akashiwo_Contig8.80.1 ID=mRNA_H-akashiwo_Contig8.80.1|Name=mRNA_H-akashiwo_Contig8.80.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=813bp|location=Sequence derived from alignment at H-akashiwo_Contig8:3927092..3928236+ (Heterosigma akashiwo CCMP452)back to top |