mRNA_H-akashiwo_Contig8.61.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A6S9G5L4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9G5L4_HETAK) HSP 1 Score: 564 bits (1453), Expect = 7.470e-202 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
Query: 46 MASQTPLLLFLAVVCLIINLQNAFQISPLSSSRQRNVVMRNDGRFALRMSTNSDYEYIIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALKLGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQVQEKK 957
MASQTPLLLFLAVVCLIINLQNAFQISPLSSSRQRNVVMRNDGRFALRMSTNSDYEYIIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALKLGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQVQEKK
Sbjct: 1 MASQTPLLLFLAVVCLIINLQNAFQISPLSSSRQRNVVMRNDGRFALRMSTNSDYEYIIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALKLGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQVQEKK 304
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A7S4UFJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFJ3_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.120e-50 Identity = 109/268 (40.67%), Postives = 156/268 (58.21%), Query Frame = 1
Query: 217 IIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPD-GQFLVPLSAERKTAMKMVLERFAE-ELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANAL------------------------KLGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQ 942
+I + AKP ELP +++ ++ V+SP FF+ IA+RAD A+SD E++ L LA L+ +L E ++D+ K VE++V +AAEP+ G+FLVPLSAER AM+ L + LD+ FLSTV WM K+ +D MDGMVGILQ+VLQ+YA A+ K+ A E ++ L + L+ D +LW +R + E S LMG +Q IE VV+ ENGSM+QRVQAE+L EL+ ++ I+
Sbjct: 85 MITKLADAKPYELPNAVSRAVRVVSSPRFFLRIAERADMATSDIEKEKLSALAENLVSTLEAVLSTTEDRLDERAKEVESVVKAAAEPESGEFLVPLSAERVNAMQTTLRKLDPISLDEGFLSTVDAWMNKSHQDGMDGMVGILQKVLQMYAGTAIVRARSQLQANVGAAVSGQSQEQADKVIAKEEEKGLTPAAALLEKLMAMDTDLWDAELRSNITAEGGISPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEAIE 352
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: D7FX94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX94_ECTSI) HSP 1 Score: 177 bits (450), Expect = 3.360e-50 Identity = 107/268 (39.93%), Postives = 176/268 (65.67%), Query Frame = 1
Query: 190 MSTNSDYEYIIDAMRAAKPEELPGI-IAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKA-EEDKMDGMVGILQRVLQLYAANALKLG-----APRREGEAPASSQ--------LFDDLLDSDPELWRGLVRKGLVEERR-----CSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVK 933
MS ++ + II+ ++ A E+ + ++K +++VA P+FF+ +A+ A+ A + +R L LAT+ T +L+ L++ AE +MD + +++ +V SAAE +G+FLVPLS ER TA++ ++ ++LD+NFL+TV WM+K+ +E++M GMV ILQ++LQ+YA+ + LG A GEA A++ L +++L+ D + W G++ GL R + D L+GAIQVA+E V++QQENGSM+QRVQAEFL EL + ++
Sbjct: 1 MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEQQRVKLENLATQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSMKIHRDQLDNNFLATVQAWMEKSGKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAGEADAAAPKKRTPAQLLLEEILNMDADKWDGVLA-GLSAVGRGMTGGVTKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIE 267
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A7S1ZNW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNW5_TRICV) HSP 1 Score: 178 bits (451), Expect = 2.800e-49 Identity = 108/271 (39.85%), Postives = 159/271 (58.67%), Query Frame = 1
Query: 217 IIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPD-GQFLVPLSAERKTAMKMVLERF-AEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALKLG------------------------APRREGEAPASSQLFDDLLDSDPELWRGLVRKGLV---EERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQ 942
+I + AKP ELP ++K I+ V+SP FF+ IA+RAD E+ L L+ L+ ++ E ++D+ ++VE++V +AAEPD G+FLVPLSAER AM+ L + +LD+ FLSTV WM K+ +D MDGMV ILQ+VLQLYA +K A + +GE P ++ L + L+D+DP+ W +R+ L EE S+ +MG +Q IE VV+ ENGSM+QRVQAE+L EL+ ++ ++
Sbjct: 102 MITKLSNAKPYELPQAVSKAIRVVSSPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSHQDGMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELRRSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEALE 372
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A6U6C7N1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6C7N1_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.230e-49 Identity = 111/269 (41.26%), Postives = 154/269 (57.25%), Query Frame = 1
Query: 217 IIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPD-GQFLVPLSAERKTAMKMVLERF-AEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALK-------------------------LGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQ 942
+I + A ELP ++K I+ V+SP FFM IA+RAD+ S + + LG LA L+ ++ E ++D+ K VE +V +AAEPD G+FLVPLSAER AM+ L + + LD+ FLSTV WM K+ ED MDGMVGILQ+VLQ+YA +K L EG PA++ L +DL++ D ++W + K +E LMG +Q IE VV+ ENGSM+QRVQAEFL EL+ V+ ++
Sbjct: 94 MITKLAGAPAYELPQAVSKAIRVVSSPRFFMRIAERADQTSDEIMKAKLGALAENVVATLEAVVSTTEDRLDERAKEVEDVVKAAAEPDSGEFLVPLSAERTEAMRAALAKLDSGSLDEGFLSTVDAWMNKSHEDGMDGMVGILQKVLQIYAGTEIKRARAALQANVGAAVSGQSQGKADEVLAETEMEGIKPAAAFL-EDLMNMDTDMWDSALAKSFSDEDGVGPKALMGEVQRTIEGVVLGLENGSMAQRVQAEFLRELVSRVEALE 361
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A6T8FN14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FN14_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.970e-48 Identity = 108/243 (44.44%), Postives = 156/243 (64.20%), Query Frame = 1
Query: 217 IIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEP-DGQFLVPLSAERKTAMKMVLERF-AEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALKLGAPRREGEAPA-SSQLFDDLLDSDPELWRGLVRKGLVE-ERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVK 933
+I + AA ELP +++K I+ V+SP FF+ IA+R D A+SDAE+D L LA L+ ++ E +D VE IV +AAEP G+FLVPL ER +M+ V+++ + LD+ FL+T+ +WM K+ +D MDGMV ILQ+VLQ+YA + R G+AP+ ++ LF++LL+ D + W +R + E E S++ LM IQ IESVV+ ENGSM+QRVQAE+L ELI V+
Sbjct: 75 MITKLLAAPSHELPRVVSKAIRVVSSPRFFLRIAERTDMATSDAEKDKLSELAGNLVSTLEAVVSTTEKVLDDTALDVENIVKAAAEPLSGEFLVPLLPERIASMREVMDQIESPRLDEGFLTTIDSWMNKSGQDGMDGMVVILQKVLQIYAGTVITRA--RNTGDAPSPAAVLFEELLNMDTDNWDFQLRNKIGEGEELLSSEALMAEIQRTIESVVLGLENGSMAQRVQAEYLRELITRVE 315
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A7S2MXS5_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MXS5_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.940e-48 Identity = 108/274 (39.42%), Postives = 157/274 (57.30%), Query Frame = 1
Query: 202 SDYEYIIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPD-GQFLVPLSAERKTAMKMVLERFAE-ELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALK-------------------------LGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQ 942
S + +I + AKP ELP +++ I+ ++SP FF+ IA+RAD A+ D E++ L LA L ++ E ++D+ K VE++V +AAEPD G+FLVPL+ ER AM+ L + LD+ FLSTV WM K+ +D MDGMV ILQ+VLQ+YA A+ L +G +PA+S L ++L+ D +LW +R + E S LMG +Q IE VV+ ENGSM+QRVQAE+L EL+ ++ I+
Sbjct: 83 STMDDMITKLADAKPYELPNAVSRAIRVISSPRFFLRIAERADMATDDVEKEKLSALAENLVSTLDAVVSTTEDRLDERAKEVESVVKAAAEPDSGEFLVPLTPERVGAMQKTLRKLDPVSLDEGFLSTVDAWMNKSHQDGMDGMVEILQKVLQIYAGTAITRARAQLQANVGAAVSGQTQEQADEVLAQEEEKGPSPAASFL-EELMKMDTDLWDSELRSTIGAEGELSPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEAIE 355
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A7S2UZX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZX9_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.100e-48 Identity = 85/190 (44.74%), Postives = 131/190 (68.95%), Query Frame = 1
Query: 220 IDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALKLGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGL 789
I M ++LPG++AK +K V +PSFF+ +A+RA++ SD ER L +LA + IL +L+K AE +D + K+ + I+ SAAEPDG+F+VPLS ER++ M++ +E+FAEEL +NFL+T+STWM+K E +K++GM ILQ LQ+YAA L++ E P S +L+ +LD++P W L++ G+
Sbjct: 81 ISTMLKTGQDDLPGLVAKNVKLVGTPSFFVRVAERAEETKSDKERKKLEKLADDLVGILNDLVKYAETSLDTSQKIAQTIIASAAEPDGEFMVPLSRERRSDMRLTMEQFAEELSENFLATISTWMQKVEREKVEGMGEILQATLQIYAAIRLRISNESTEKATP-SMRLYSKILDANPLDWDDLIKNGI 269
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: B8BTY4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTY4_THAPS) HSP 1 Score: 172 bits (435), Expect = 2.790e-47 Identity = 105/271 (38.75%), Postives = 160/271 (59.04%), Query Frame = 1
Query: 217 IIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPD-GQFLVPLSAERKTAMKMVLERFA-EELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALK------------------------LGAPRREGEAP---ASSQLFDDLLDSDPELWRGLVRKGLV-EERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEI 939
+I + +AKP ELP +++ I+ V+SP FF+ IA+RAD A+ E++ L A +Q ++ + E +D+ K VE +V +A+EP+ G+FLVPLS ER AM++ +E+ +L++ FLSTV WM KA +D MDGMV I+Q VLQ+YA + + A EG++P A+S L + LL +D + W +RKG+ E+ +C+ D L+ IQ +E V++ ENGSM+QRVQAEFL EL+ V+ +
Sbjct: 71 MITKLSSAKPYELPNAVSRAIRVVSSPRFFLRIAERADAATDPDEKERLSAFADNLVNTIQAVVSMTEDSLDERAKDVERVVKAASEPESGEFLVPLSKERVDAMRVEMEKLEIGDLNEGFLSTVDAWMNKAHQDGMDGMVTIMQNVLQIYAGLVISRARFQLQANVGAAISGEDQSAADAVAAAASEGDSPVNTAASDLLEQLLRADTDAWDYEIRKGVNGEDSQCTKDQLVTEIQRTMEGVILGLENGSMAQRVQAEFLRELVTRVEAV 341
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Match: A0A7R9WEL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEL2_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.120e-47 Identity = 105/269 (39.03%), Postives = 154/269 (57.25%), Query Frame = 1
Query: 217 IIDAMRAAKPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPD-GQFLVPLSAERKTAMKMVLERF-AEELDDNFLSTVSTWMKKAEEDKMDGMVGILQRVLQLYAANALK-------------------------LGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRCSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQ 942
+I + AKP ELP ++K I+ V+SP FFM IA+RAD+ + + L L+ L+ ++ E ++D+ K VE +V +AAEP+ G+FLVPL+ +R AM+ +E+ + LD+ FLSTV WM K+ +D MDGMVGILQ+VLQ+YA +K L + G PA++ L +DL++ D +LW + K +E LMG +Q IE VV+ ENGSM+QRVQAEFL EL+ V+ ++
Sbjct: 90 MITKLADAKPYELPQAVSKAIRVVSSPRFFMRIAERADQTTDKVMKAKLAALSENVVATLEAVVSTTEDRLDERAKDVEDVVKAAAEPESGEFLVPLTKDRVDAMREAMEKLDSASLDEGFLSTVDAWMNKSHQDGMDGMVGILQKVLQIYAGTEIKRARAQLQANVGAAVSGQSQGKADEVLAEEEKGGLKPAAA-LLEDLMEMDTDLWDSELSKSFSDENGVGPKALMGEVQRTIEGVVLGLENGSMAQRVQAEFLRELVSRVEALE 357 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig8.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig8.61.1 >prot_H-akashiwo_Contig8.61.1 ID=prot_H-akashiwo_Contig8.61.1|Name=mRNA_H-akashiwo_Contig8.61.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=305bp MASQTPLLLFLAVVCLIINLQNAFQISPLSSSRQRNVVMRNDGRFALRMSback to top mRNA from alignment at H-akashiwo_Contig8:3126477..3137252- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig8.61.1 ID=mRNA_H-akashiwo_Contig8.61.1|Name=mRNA_H-akashiwo_Contig8.61.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=10776bp|location=Sequence derived from alignment at H-akashiwo_Contig8:3126477..3137252- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig8:3126477..3137252- >mRNA_H-akashiwo_Contig8.61.1 ID=mRNA_H-akashiwo_Contig8.61.1|Name=mRNA_H-akashiwo_Contig8.61.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=915bp|location=Sequence derived from alignment at H-akashiwo_Contig8:3126477..3137252- (Heterosigma akashiwo CCMP452)back to top |