mRNA_H-akashiwo_Contig128.17.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig128.17.1
Unique NamemRNA_H-akashiwo_Contig128.17.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 446 bits (1148), Expect = 6.800e-156
Identity = 219/269 (81.41%), Postives = 239/269 (88.85%), Query Frame = 1
Query:  178 KYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSDANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYL 984
            K+G+ F QTYSPVVNAASLRL LAISANKGYAVDSLDISTAFLNG +  DVYVRQPP + D QHP KVWKLNKALYGL QSPR+WYMELH+HL S GF+RSG+ESCLYI  D  G ELMVAVYVDDLVISGSS A+VS+FK+SL SKY+LTD GELTQILGIKV RDK +KCF+LSQTSFIKDA++KFGLDYLPAC+TP+DHT DLTPTPGFKA+LSDAN YRSMVGTLAWVANWTRP LAF VHKLQR Q NPEPKHFEA +RAFRYL
Sbjct:    1 KFGIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDG-GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 378 bits (971), Expect = 7.020e-127
Identity = 188/279 (67.38%), Postives = 220/279 (78.85%), Query Frame = 1
Query:    4 EALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGE-LMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSDAN 837
            +A+  ELDS+       LVDLPPGA+ IGT+W+L KK DADG+L K+KARLVAQG++Q+ GV F+ TYSPV+ A SLRL L+I+ANKG+AV++LDISTAFLN DIDGDVYV+QPPGF D  HP KVWKL KALYGL QSPRLWY  LHE LL   F RS YESCLY R +S  GE  MVAVYVDDLV+S +  ++VS  K S  S++ +TDLG LT ILGIKV+RD  +KCFYLSQ SF++DAISKFGLDYLPACRTPM +  DLTPTPGFKA L DAN
Sbjct:  131 QAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKYKARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 326 bits (836), Expect = 3.160e-107
Identity = 160/195 (82.05%), Postives = 174/195 (89.23%), Query Frame = 1
Query:  436 MELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSDANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGTQSECLRLGG 1020
            MELH+HL S GF+RSG+ESCLYI  D  G ELMVAVYVDDLVISGSS A+VS+FK+SL SKY LTD GELTQILGIKV RDK +KCF+LSQTSFIKDA++KFGLDYLPAC+TP+DHT DLTPTPGFKA+LSDAN YRSMVGTLAWVANWTRP LAF VHKLQR Q NPEPKHFEA +RAFRYLKGTQSE LRLGG
Sbjct:    1 MELHDHLESLGFKRSGHESCLYIHRDG-GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG 194          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK)

HSP 1 Score: 294 bits (753), Expect = 1.160e-93
Identity = 151/225 (67.11%), Postives = 175/225 (77.78%), Query Frame = 1
Query:    7 ALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGE-LMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRD 678
            A+  EL S+   D   LVDLPPGANVIGT+WVL KK DADG+L K+KARLVAQG++Q+ GV F+ TYSPVV A SLRL L+I+ANKG+AV++LDISTAFLN DIDGDVYV+QPPGF D  HP KVWKL KALYGL QSPRLWY  LHE LL   F RS YESCLY R +S  GE  MVAVYVDDLV+S +  ++VS  K S  S++ +TDLG LT ILGIKV+RD
Sbjct:  203 AMLKELGSMESHDVKELVDLPPGANVIGTRWVLSKKFDADGNLQKYKARLVAQGFTQREGVDFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRD 427          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 287 bits (734), Expect = 1.800e-85
Identity = 144/342 (42.11%), Postives = 223/342 (65.20%), Query Frame = 1
Query:    1 QEALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLS--DANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGTQSECLRLGG 1020
            +EA+  E DSL   +   LVD P GAN++G +W+L KK DADG+L K+KARL AQGYSQ  GV +T T+SPVV++ASLR  L I+A++   +  +DI TAFL+G ++ D+Y++QP G++      KV KL K+LYGL Q+P+ WY  L+  LL  G+ R+GY+SC+Y +  S+GG+ +++VYVDD+V++ S  + +S  K++++  Y+++D+GE+  ILGIKV RD+ ++   LSQ SFI++A  KF +        P++   D+         LS  +A ++RS+VGT+ W+A WT P +A+++H L +   +P      A+    RYL  T+ + + LGG
Sbjct:  500 REAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGG 841          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A5H2XKG5_PRUDU (BURP domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XKG5_PRUDU)

HSP 1 Score: 263 bits (673), Expect = 1.460e-80
Identity = 133/331 (40.18%), Postives = 206/331 (62.24%), Query Frame = 1
Query:    1 QEALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSDANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGT 993
            Q+A+ +E+D +   +T  LVD P    VIG +WV   K++ DG + KHKARLV +GY+QK G+ F +T++PV    ++R  +A++A KG+ +  LD+ +AFLNG +  +VYV QP GF  + +  KV+KL KALYGL Q+PR WY E++ +L+S G+ RS  E+ LY ++    G L+V++YVDD+V +GSS  ++ +FK  +  +Y++TDLG L   LG+ V + +   C +++Q  +    + KFGL       TP+  T  L    G  +D +D N YR +VG+L ++   TRP + FA   L R+ + P  KH+  A+R  RY++GT
Sbjct:   19 QKAMEAEMDMIEKNETWKLVDRPSDKPVIGVKWVYKTKLNLDGSIQKHKARLVVKGYAQKPGIDFNETFAPVARLDTIRTLIALAAQKGWKLYQLDVKSAFLNGVLKEEVYVDQPDGFVTTNYEDKVYKLKKALYGLKQAPRAWYEEINAYLVSCGYVRSTSEATLYCKTKEDSGTLIVSIYVDDIVYTGSSEELIDEFKTEMMRRYEMTDLGLLYHFLGMAVIQTE--SCIFINQKKYALTLLDKFGLKQCKPVSTPLVATEKLCKDDG--SDPADENEYRQIVGSLLYLTA-TRPDIMFAASLLARFMHCPTKKHYGTAKRVLRYIQGT 344          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: H3H1B2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1B2_PHYRM)

HSP 1 Score: 260 bits (665), Expect = 7.790e-80
Identity = 134/342 (39.18%), Postives = 210/342 (61.40%), Query Frame = 1
Query:    1 QEALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTP---GFKADLSDAN-RYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGTQSECLRL 1014
            +EA  SE DSL   DT  +V LP G   IG +WV   K +  G + + KARLVA+G+SQKYG+ + +T++PV    S+R+ L+++A  G  +  +D+ TAFLNG +D D+Y+ QP G+ D  HP  V KL ++LYGL QSPR+W   + + +L  GF++   + C+Y++ D     + VA+YVDDLV++ SS  M+ D K++L+ ++++TD+G+L   LG+++ +D ++    + QT F KD + KF +D     +TP D    LT      G K D +  N  YR+ VG L ++   TRP LA AV  L ++  +P P H++A +R FRY++GT++  +  
Sbjct:   40 KEACDSECDSLLKNDTWDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRDGHD-MIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIEF 380          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A540M9F0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540M9F0_MALBA)

HSP 1 Score: 261 bits (668), Expect = 8.120e-80
Identity = 135/333 (40.54%), Postives = 206/333 (61.86%), Query Frame = 1
Query:    1 QEALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSDANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGTQS 999
            QEA+++E++ +   DT  LVD P    VIG +WV   K++ DG + KHKARLVA+GY+QK G+ + +T++PV    ++R  +A++A KG+ +  LD+ +AFLNG ++ +VY+ QP GF+      KV+KL KALYGL Q+PR WY E+  +L S  F RS  E+ LY +SD  GG L+V++YVDD+V +GSS  ++S+FK  +  KY+++DLG L   LG+ + + +     ++ Q+ + K  + KFGL+       P+     L    G  ++ +D   YR +VG+L ++   TRP L +A   L R+ N P  KHF  A R  RY++GT S
Sbjct:   19 QEAMNAEINMIEKNDTWQLVDRPTDKPVIGVRWVFKTKLNLDGTVQKHKARLVAKGYAQKPGIDYNETFAPVARLDTIRTLIALAAQKGWKLFQLDVKSAFLNGILEEEVYIEQPEGFEVKNACHKVYKLRKALYGLKQAPRAWYSEIDAYLTSCNFIRSTSEATLYTKSDEEGGILIVSIYVDDIVYTGSSKTLLSEFKMEMMQKYEMSDLGLLHHFLGMGILQTENG--VFIHQSKYAKSLLVKFGLEDCKPVSIPLPTGEKLKKVDG--SEFADETMYRKIVGSLLYLTA-TRPDLMYAASLLSRFMNGPTKKHFGIARRVLRYVQGTLS 346          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A4Y1RYP8_PRUDU (Transposable element protein n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RYP8_PRUDU)

HSP 1 Score: 260 bits (664), Expect = 8.270e-78
Identity = 131/331 (39.58%), Postives = 206/331 (62.24%), Query Frame = 1
Query:    1 QEALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSDANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGT 993
            Q+A+ +E++ +   +T  LVD P    VIG +WV   K++ DG + KHKARLV +GY+QK G+ F +T++PV    ++R  +A++A KG+ +  LD+ +AFLNG +  +VYV QP GF  + +  KV+KL KALYGL Q+PR WY E++ +L+S G+ RS  E+ LY ++    G L+V++YVDD+V +GSS  ++ +FK  +  +Y++TDLG L   LG+ V + +   C +++Q  +    + KFGL       TP+  T  L    G  +D +D + YR +VG+L ++   TRP + FA   L R+ + P  KH+  A+R  RY++GT
Sbjct:  203 QKAMEAEMEMIEKNETWELVDRPSDKPVIGVKWVYKTKLNLDGSIQKHKARLVVKGYAQKPGIDFNETFAPVARLDTIRTLIALAAQKGWKLYQLDVKSAFLNGVLKEEVYVDQPDGFVTTNYEDKVYKLKKALYGLKQAPRAWYEEINAYLVSCGYVRSTSEATLYCKTKEDSGTLIVSIYVDDIVYTGSSEELIDEFKTEMMRRYEMTDLGLLYHFLGMAVIQTE--SCIFINQKKYALTLLDKFGLKQCKPVSTPLVATEKLCKDDG--SDPADESEYRQIVGSLLYLTA-TRPDIMFAASLLARFMHCPTKKHYGTAKRVLRYIQGT 528          
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Match: A0A4T9WAI5_9FIRM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A4T9WAI5_9FIRM)

HSP 1 Score: 258 bits (659), Expect = 9.670e-78
Identity = 135/340 (39.71%), Postives = 211/340 (62.06%), Query Frame = 1
Query:    1 QEALHSELDSLACKDTHTLVDLPPGANVIGTQWVL*KKIDADGHLVKHKARLVAQGYSQKYGVGFTQTYSPVVNAASLRLFLAISANKGYAVDSLDISTAFLNGDIDGDVYVRQPPGFKDSQHPGKVWKLNKALYGL*QSPRLWYMELHEHLLS*GFQRSGYESCLYIRSDSSGGELMVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDKLSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTP---GFKADLSDAN-RYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRYLKGTQSECL 1008
            +EA  SE++SL   +T TLV LP G   IG +WV   K +  G + + KARLVA+G+SQKYG+ + +T++PV    S+R+ L+++A     V  +D+ TAFLNG +D D+Y+ QP G+ D   P  V +L ++LYGL QSPR+W   + E +L  GF++   + C+Y++ D+    + VA+YVDDLV++ SS  M+ D K++L+ ++++TD+G+L   LG+++ +D  +    + QT F KD + KF +D     +TP D    LT      G K D + AN  YR+ VG L ++   TRP LA AV  L ++  +P P H++A +R FRY++GT++  L
Sbjct:   85 KEACDSEVESLRKNETWTLVPLPKGRKAIGCRWVFRVKENQSGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRVLLSLAAKYKLTVHQMDVKTAFLNGLLDEDIYMAQPDGYVDGDRPDYVCRLKRSLYGLKQSPRMWNKTIDEFMLKLGFKKCESDHCIYLKRDNHD-MMFVALYVDDLVLASSSDRMLKDTKQALSDRFEMTDMGQLKYFLGMEIEQDVATGKVSVRQTKFAKDILEKFKMDESNPVKTPQDPGLKLTKAMCEGGCKHDETMANVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIRGTKTHGL 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig128.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y6S2_HETAK6.800e-15681.41Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y3B6_HETAK7.020e-12767.38Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
A0A7S4DD78_HETAK3.160e-10782.05Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y3C5_HETAK1.160e-9367.11Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK1.800e-8542.11Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A5H2XKG5_PRUDU1.460e-8040.18BURP domain-containing protein n=1 Tax=Prunus dulc... [more]
H3H1B2_PHYRM7.790e-8039.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A540M9F0_MALBA8.120e-8040.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y1RYP8_PRUDU8.270e-7839.58Transposable element protein n=2 Tax=Prunus dulcis... [more]
A0A4T9WAI5_9FIRM9.670e-7839.71Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig128contigH-akashiwo_Contig128:1041368..1042390 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5037.XP_001537293.1
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve
Model size1023
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.32e-28
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3QNZW@4890|Ascomycota,20FR9@147545|Eurotiomycetes,3B52A@33183|Onygenales
Descriptionto reverse transcriptase
Cds size492
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387141.7690215-UTR-H-akashiwo_Contig128:1041367..10418981681387141.7690215-UTR-H-akashiwo_Contig128:1041367..1041898Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig128 1041368..1041898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387141.7802515-CDS-H-akashiwo_Contig128:1041898..10423901681387141.7802515-CDS-H-akashiwo_Contig128:1041898..1042390Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig128 1041899..1042390 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig128.17.1prot_H-akashiwo_Contig128.17.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig128 1041899..1042390 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig128.17.1

>prot_H-akashiwo_Contig128.17.1 ID=prot_H-akashiwo_Contig128.17.1|Name=mRNA_H-akashiwo_Contig128.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=164bp
MVAVYVDDLVISGSSTAMVSDFKRSLTSKYDLTDLGELTQILGIKVTRDK
LSKCFYLSQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPGFKADLSD
ANRYRSMVGTLAWVANWTRPGLAFAVHKLQRYQNNPEPKHFEAAERAFRY
LKGTQSECLRLGG*
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mRNA from alignment at H-akashiwo_Contig128:1041368..1042390+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig128.17.1 ID=mRNA_H-akashiwo_Contig128.17.1|Name=mRNA_H-akashiwo_Contig128.17.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1023bp|location=Sequence derived from alignment at H-akashiwo_Contig128:1041368..1042390+ (Heterosigma akashiwo CCMP452)
CAAGAGGCCCTTCACAGTGAGCTCGATAGTCTGGCCTGCAAAGACACCCA CACCCTGGTTGACCTTCCTCCTGGTGCCAATGTTATTGGTACTCAATGGG TGCTCTAAAAAAAAATTGATGCTGACGGCCACCTAGTAAAGCATAAGGCC AGGCTCGTTGCCCAAGGCTATTCTCAAAAGTATGGTGTTGGTTTCACTCA AACCTACAGCCCCGTGGTTAACGCAGCCAGTCTTCGCTTGTTCCTTGCAA TTTCTGCTAACAAGGGCTATGCTGTTGACTCCCTCGATATCAGTACTGCG TTTCTCAACGGCGATATCGATGGTGATGTCTATGTTCGTCAGCCTCCTGG CTTCAAAGATTCTCAGCACCCTGGCAAAGTCTGGAAGCTTAACAAGGCGC TGTATGGCCTTTAGCAAAGCCCAAGACTGTGGTATATGGAGCTGCATGAG CACCTTCTGTCTTAGGGTTTCCAGCGCAGTGGCTACGAATCCTGCTTATA TATCCGCAGTGATAGCTCGGGTGGTGAGCTTATGGTTGCTGTTTACGTTG ATGATCTCGTAATCAGTGGCAGCTCTACTGCTATGGTCTCTGACTTTAAG CGCTCTCTTACTTCTAAGTACGATCTCACTGATCTAGGGGAGCTTACCCA GATTCTTGGCATCAAAGTCACCCGTGACAAGCTCAGTAAATGTTTCTATC TCTCACAGACTTCCTTTATCAAAGACGCAATCTCCAAGTTCGGGCTTGAC TACTTGCCTGCCTGCAGAACCCCCATGGACCATACCGCAGACCTTACCCC TACCCCTGGCTTCAAGGCTGATCTCTCTGATGCTAACAGGTACAGGTCTA TGGTGGGCACTCTGGCTTGGGTTGCTAACTGGACCAGGCCTGGGCTGGCT TTTGCTGTTCACAAGCTCCAGCGGTACCAGAATAACCCTGAGCCCAAGCA CTTCGAGGCCGCTGAGCGAGCATTTCGGTACTTGAAAGGCACCCAGTCGG AGTGCCTAAGACTCGGGGGGTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig128:1041368..1042390+

>mRNA_H-akashiwo_Contig128.17.1 ID=mRNA_H-akashiwo_Contig128.17.1|Name=mRNA_H-akashiwo_Contig128.17.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=492bp|location=Sequence derived from alignment at H-akashiwo_Contig128:1041368..1042390+ (Heterosigma akashiwo CCMP452)
ATGGTTGCTGTTTACGTTGATGATCTCGTAATCAGTGGCAGCTCTACTGC
TATGGTCTCTGACTTTAAGCGCTCTCTTACTTCTAAGTACGATCTCACTG
ATCTAGGGGAGCTTACCCAGATTCTTGGCATCAAAGTCACCCGTGACAAG
CTCAGTAAATGTTTCTATCTCTCACAGACTTCCTTTATCAAAGACGCAAT
CTCCAAGTTCGGGCTTGACTACTTGCCTGCCTGCAGAACCCCCATGGACC
ATACCGCAGACCTTACCCCTACCCCTGGCTTCAAGGCTGATCTCTCTGAT
GCTAACAGGTACAGGTCTATGGTGGGCACTCTGGCTTGGGTTGCTAACTG
GACCAGGCCTGGGCTGGCTTTTGCTGTTCACAAGCTCCAGCGGTACCAGA
ATAACCCTGAGCCCAAGCACTTCGAGGCCGCTGAGCGAGCATTTCGGTAC
TTGAAAGGCACCCAGTCGGAGTGCCTAAGACTCGGGGGGTGA
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