mRNA_H-akashiwo_Contig128.13.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig128.13.1
Unique NamemRNA_H-akashiwo_Contig128.13.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig128.13.1 vs. uniprot
Match: A0A7S3UX35_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX35_HETAK)

HSP 1 Score: 118 bits (295), Expect = 1.060e-30
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 
Query:    1 LNTSLGCQQGGGGCRSGGSTRWTMRTWLKGAVIGRGAFGQVHRGLDKRTGRLYAI 165
            LNTSLGCQQGGGGCRSGGSTRWTMRTWLKGAVIGRGAFGQVHRGLDKRTGRLYAI
Sbjct:  177 LNTSLGCQQGGGGCRSGGSTRWTMRTWLKGAVIGRGAFGQVHRGLDKRTGRLYAI 231
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig128.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3UX35_HETAK1.060e-30100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig128contigH-akashiwo_Contig128:818197..818564 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4950.XP_003681625.1
Preferred nameSTE11
PFAMsPkinase,Ras_bdg_2,SAM_1,SAM_2
Model size166
Max annot lvl4751|Fungi
KEGG koko:K11228
KEGG Pathwayko04011,map04011
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0000161,GO:0000165,GO:0000186,GO:0000196,GO:0000746,GO:0000747,GO:0000749,GO:0000750,GO:0000935,GO:0001402,GO:0001403,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004709,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007124,GO:0007154,GO:0007165,GO:0007186,GO:0007231,GO:0007232,GO:0007346,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010514,GO:0010525,GO:0010528,GO:0010562,GO:0010564,GO:0010604,GO:0010646,GO:0010647,GO:0010941,GO:0016020,GO:0016049,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019220,GO:0019222,GO:0019236,GO:0019538,GO:0019904,GO:0019953,GO:0022414,GO:0022603,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030428,GO:0030447,GO:0031098,GO:0031136,GO:0031137,GO:0031139,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032005,GO:0032093,GO:0032147,GO:0032153,GO:0032155,GO:0032268,GO:0032270,GO:0033554,GO:0033674,GO:0034306,GO:0034307,GO:0034605,GO:0035556,GO:0036211,GO:0036267,GO:0040007,GO:0042173,GO:0042221,GO:0042325,GO:0042327,GO:0042981,GO:0043067,GO:0043085,GO:0043170,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0043900,GO:0043902,GO:0043937,GO:0043940,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044703,GO:0044764,GO:0045595,GO:0045859,GO:0045860,GO:0045937,GO:0046999,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051286,GO:0051338,GO:0051347,GO:0051403,GO:0051445,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0060284,GO:0065007,GO:0065009,GO:0070783,GO:0070887,GO:0071214,GO:0071310,GO:0071444,GO:0071470,GO:0071507,GO:0071554,GO:0071704,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0104004,GO:0140096,GO:1901564,GO:1902531,GO:1902533,GO:2000241,GO:2000243
Exons2
Evalue0.000317
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota,38D6Z@33154|Opisthokonta,3NURD@4751|Fungi,3QJSC@4890|Ascomycota,3RSJM@4891|Saccharomycetes,3S0Q6@4893|Saccharomycetaceae
EC2.7.11.25
Descriptionto Saccharomyces cerevisiae STE11 (YLR362W)
Cds size165
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387141.3188627-CDS-H-akashiwo_Contig128:818196..8183161681387141.3188627-CDS-H-akashiwo_Contig128:818196..818316Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig128 818197..818316 +
1681387141.3319426-CDS-H-akashiwo_Contig128:818519..8185641681387141.3319426-CDS-H-akashiwo_Contig128:818519..818564Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig128 818520..818564 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig128.13.1prot_H-akashiwo_Contig128.13.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig128 818197..818564 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig128.13.1

>prot_H-akashiwo_Contig128.13.1 ID=prot_H-akashiwo_Contig128.13.1|Name=mRNA_H-akashiwo_Contig128.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=55bp
LNTSLGCQQGGGGCRSGGSTRWTMRTWLKGAVIGRGAFGQVHRGLDKRTG
RLYAI
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mRNA from alignment at H-akashiwo_Contig128:818197..818564+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig128.13.1 ID=mRNA_H-akashiwo_Contig128.13.1|Name=mRNA_H-akashiwo_Contig128.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=368bp|location=Sequence derived from alignment at H-akashiwo_Contig128:818197..818564+ (Heterosigma akashiwo CCMP452)
TTAAATACCTCCTTAGGTTGCCAACAGGGCGGTGGAGGCTGCCGTAGTGG
TGGCAGCACTCGGTGGACAATGCGCACTTGGCTGAAAGGGGCAGTCATCG
GGCGTGGTGCTTTTGGTCAGGTGAGGTACAAAGAAGCACTACTACGTTAC
GTTCTTCTTTCATTTCCTTTACATGATGGGCTGTTGGAGGGGCATGATTT
ATCTTGCCTTCATTCTTTTCATTAAGAAAAAGAGGAGTGGCAAATTAAAG
CTACTATTGCCCCTGGGGTGCCCCAGCGTGCTTCGACTAATTACCTACAG
CCCCCTACTTCTCTTTTGACCAGGTTCACCGTGGGCTGGACAAGCGCACG
GGGCGGCTGTACGCCATC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig128:818197..818564+

>mRNA_H-akashiwo_Contig128.13.1 ID=mRNA_H-akashiwo_Contig128.13.1|Name=mRNA_H-akashiwo_Contig128.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=165bp|location=Sequence derived from alignment at H-akashiwo_Contig128:818197..818564+ (Heterosigma akashiwo CCMP452)
TTAAATACCTCCTTAGGTTGCCAACAGGGCGGTGGAGGCTGCCGTAGTGG
TGGCAGCACTCGGTGGACAATGCGCACTTGGCTGAAAGGGGCAGTCATCG
GGCGTGGTGCTTTTGGTCAGGTTCACCGTGGGCTGGACAAGCGCACGGGG
CGGCTGTACGCCATC
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