mRNA_H-akashiwo_Contig1278.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A0A7S1CFG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFG3_9STRA) HSP 1 Score: 124 bits (312), Expect = 6.130e-33 Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 10 FSNLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
F++LG C ++ C+Q+DFLPF CDCC+G FCL HRS+ H C K+ + + VA+ CP C++ + +D N +H C D A+ KKP+C VKGCR K V N C +C Q C+ HR+ D H C
Sbjct: 3 FAHLGAHCDVKTCRQRDFLPFTCDCCDGTFCLDHRSYRTHECPKAAELDSVAIKCPLCSQAFKLGAGEDANVAWERHSRDGCDP----DGRKARVKKPRCDVKGCREKLVFSNRYDCTSCGQAVCLQHRFADAHKC 134
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: D7FYN8_ECTSI (AN1 and C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.740e-31 Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 1
Query: 1 MAFFSNLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNCG 420
M F+ +GK C ++C QQDFLPF CDCCNG FCL+HRS+ H C S +++ A+ CP C KT+R QD N H + C +D AK+ K +C CR N QRC +C + TC+ HR+ D+HNC
Sbjct: 1 MPEFTGVGKHCGAENCNQQDFLPFECDCCNGTFCLSHRSYAAHSCAASGNKDFRALVCPLCKKTVRFNGGQDPNQQWDLHTRTDCNP---EDYKRAKQTKKRCAAASCRVVLGPTNTQRCASCGKETCLTHRFPDSHNCS 137
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: I0YR52_COCSC (AN1-type domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YR52_COCSC) HSP 1 Score: 118 bits (296), Expect = 4.360e-31 Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = 1
Query: 16 NLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNCGFR 426
+LG C DCQQ DFLPF+CD C +FCLAHR + H C+++ +R + CP CAK ++ L QD NA +H AC + KKPKC V C+ K SVN C TC C+ HR+++ H+C R
Sbjct: 2 SLGDHCEEPDCQQIDFLPFKCDACQKVFCLAHRKYAAHSCQRAGERETATIICPLCAKAIKLLPDQDANAAFERHTQEACDPMNYTKVH----KKPKCPVPNCKEKLNSVNTYSCKTCGTSVCLKHRFQNDHDCASR 134
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A8IZN9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IZN9_CHLRE) HSP 1 Score: 119 bits (297), Expect = 4.610e-30 Identity = 57/135 (42.22%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 16 NLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNCG 420
++G+ CS+ C Q DFLPF+CDCCN IFCL HRS+ H C S + + CP CAK++R QD NA+ QH + C + D KKP+C V GC+ K ++N RC C Q C+ HR H C
Sbjct: 14 SIGEHCSVSHCGQVDFLPFKCDCCNRIFCLEHRSYAAHACPNSGSKETTVIVCPICAKSVRMTSGQDPNALFEQHTRTDCDPANYDRVH----KKPRCPVAGCKTKLTTINRYRCKHCSQAICLKHRDPADHRCA 144
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A0A699Z4Y8_HAELA (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z4Y8_HAELA) HSP 1 Score: 116 bits (290), Expect = 9.070e-30 Identity = 52/133 (39.10%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 19 LGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
+G+ CS+ DC Q+DFLPF+CDCC+ +FCL HR++++H C+K+ ++ + CP CAK++R L +D N +H S C ++ + KKP+C V GC+ K ++N C C+Q C+ HR+ H C
Sbjct: 8 IGEHCSVPDCGQRDFLPFKCDCCSRVFCLQHRTYSNHACEKAGEKQLELIVCPLCAKSVR-LNGRDANIAFEEHTKSGCDPQNYNKVH----KKPRCPVHGCKEKLATINTYHCKLCQQRVCIKHRHACDHGC 135
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A0A8J9WKI0_9CHLO (Zinc finger AN1 and C2H2 domain-containing stress-stress-associated protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKI0_9CHLO) HSP 1 Score: 114 bits (285), Expect = 2.940e-28 Identity = 56/135 (41.48%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 16 NLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAK-KKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
+LG C +++C+Q DFLPF+CD C +FCLAHR ++ H CKK+ ++ + CP CAK ++ L QD NA +H AC D AK KK +C V C+ K SVN C TC C+ HR+ H+C
Sbjct: 2 SLGDHCEVEECKQIDFLPFKCDACEKVFCLAHRKYSAHSCKKAGEKETQTIICPLCAKAIKLLPDQDANAAFERHSQEAC-----DPMNYAKVHKKARCPVPNCKEKLGSVNTYSCKTCGTSVCLRHRFPGDHDC 131
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A0A835W535_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W535_CHLIN) HSP 1 Score: 116 bits (290), Expect = 7.280e-28 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 16 NLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
++G+ CS+ C Q DFLPF+CDCCN I+CL HRS+ H C S + + CP CAK++R QD NA+ QH + C + D KKP+C V GC+ K ++N RC C Q C+ HR H C
Sbjct: 13 SIGEHCSVGHCGQVDFLPFKCDCCNRIYCLEHRSYAAHACPNSGSKETTVIVCPICAKSVRMTAGQDPNALFEQHARTDCDPTNYDRVH----KKPRCPVAGCKTKLTTINRYRCKHCSQAICLKHRDPADHRC 142
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A0A836BBP4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBP4_9CHLO) HSP 1 Score: 115 bits (289), Expect = 9.250e-28 Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 16 NLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
++G+ CS+ C Q DFLPF+CDCCN +FCL HRS+ H C S + + CP CAK++R D NA+ QH + C + D KKP+C V GC+ K ++N RC C Q C+ HR H C
Sbjct: 13 SIGEHCSVSHCGQVDFLPFKCDCCNRVFCLEHRSYAAHACPSSGSKESTVIVCPICAKSVRMTPGTDPNALFEQHTRTDCDPANYDRVH----KKPRCPVAGCKTKLTTINRYRCKHCNQAICLKHRDPADHRC 142
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: D8U802_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U802_VOLCA) HSP 1 Score: 111 bits (277), Expect = 2.460e-27 Identity = 54/133 (40.60%), Postives = 71/133 (53.38%), Query Frame = 1
Query: 19 LGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQHQASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
+G CS++DC Q DFLPF+CDCCN FCL HRS+ H C + + + CP CAK +R QD + HQ + C + D KKP+C V GC+ K ++N RC C Q C+ HR H C
Sbjct: 2 IGDHCSVEDCGQIDFLPFKCDCCNRTFCLEHRSYVAHSCPNAGAKETTVIVCPICAKGMRLKPGQDPSEAFDVHQRTDCDPANYDRVH----KKPRCPVSGCKEKLTTINAYRCKHCSQRVCLRHRDPGDHKC 130
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Match: A0A397FDG4_9STRA (AN1-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FDG4_9STRA) HSP 1 Score: 108 bits (271), Expect = 4.080e-27 Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 16 NLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDRNCVAVSCPQCAKTLRCLQSQDTNAVLAQH-QASACTTRSRDDATSAKKKKPKCCVKGCRAKRVSVNMQRCLTCRQMTCMNHRYKDTHNC 417
+LG+ CS C Q DFLPF CDCC G+FCL HR++ H C + ++ A++CP C T+ QD N + QH +A C S +D KK K +C + CR + N +C TCR+ C+ HR++ H C
Sbjct: 4 DLGEHCSKPGCHQNDFLPFACDCCAGVFCLEHRTYDAHSCPNAGRKDSRAITCPLCRATIPLTNDQDVNVIFEQHTRAGNCNPESYNDR---KKAKARCEAENCREILTASNTMQCPTCRKKVCLRHRFETDHQC 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1278.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1278.9.1 >prot_H-akashiwo_Contig1278.9.1 ID=prot_H-akashiwo_Contig1278.9.1|Name=mRNA_H-akashiwo_Contig1278.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=142bp MAFFSNLGKQCSLQDCQQQDFLPFRCDCCNGIFCLAHRSHTDHHCKKSEDback to top mRNA from alignment at H-akashiwo_Contig1278:260341..260766- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1278.9.1 ID=mRNA_H-akashiwo_Contig1278.9.1|Name=mRNA_H-akashiwo_Contig1278.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=426bp|location=Sequence derived from alignment at H-akashiwo_Contig1278:260341..260766- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1278:260341..260766- >mRNA_H-akashiwo_Contig1278.9.1 ID=mRNA_H-akashiwo_Contig1278.9.1|Name=mRNA_H-akashiwo_Contig1278.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=426bp|location=Sequence derived from alignment at H-akashiwo_Contig1278:260341..260766- (Heterosigma akashiwo CCMP452)back to top |