mRNA_H-akashiwo_Contig1262.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 302 bits (774), Expect = 6.140e-99 Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHLSQ 456
DLLKQGVISESSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTA EMFDNLAEAYYFTSLDMLWAYWSV LREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQG QYEFALCFLDDVLCYSPRNFTLHLYHLSQ
Sbjct: 119 DLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQ 270
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 302 bits (774), Expect = 8.220e-97 Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHLSQ 456
DLLKQGVISESSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTA EMFDNLAEAYYFTSLDMLWAYWSV LREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQG QYEFALCFLDDVLCYSPRNFTLHLYHLSQ
Sbjct: 119 DLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQ 270
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 222 bits (565), Expect = 1.270e-69 Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 1
Query: 61 MVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHLSQ 456
MV KKTGETRMCLDLR+LNAITTP+KFPLPT EMFD L AYYF+SLDMLWAYWSV LR+ DK KTAFTVRN+KYAFNVMCFGLTNAPATFSHLVNKVFQG Q++FALCFLDDVLCY+ +F+LHL L +
Sbjct: 1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEE 132
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A5N6PXX9_9ASTR (Reverse transcriptase domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PXX9_9ASTR) HSP 1 Score: 149 bits (375), Expect = 1.450e-38 Identity = 76/150 (50.67%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHL 450
D+L QG+I S S F++P+++V KK G R C+D RALNAIT P +FP+PT E+FD L A YF+ LD+L Y ++L+EG +KTAF + Y F VM FGLTNAP+TF L+N +F+ F +F L F DD+L YSP + HL HL
Sbjct: 591 DMLAQGIIRPSYSPFSSPVLLVRKKDGTWRFCVDYRALNAITIPDRFPIPTIDELFDELHGAVYFSKLDLLSGYHQIRLQEGAITKTAFRTYDGHYEFLVMPFGLTNAPSTFQRLMNDIFRPFLRKFVLVFFDDILIYSPT-WDEHLSHL 739
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A392PP11_9FABA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PP11_9FABA) HSP 1 Score: 137 bits (344), Expect = 4.930e-38 Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHL 450
D+L+QG+I S+S F++PI++V KK G R C D RALN IT FP+PT E+ D L A YF+ LD+ Y + ++ D+ KTAF + Y + VM FGLTNAPATF L+NK+FQ +F L F DD+L YS ++ HL HL
Sbjct: 4 DMLEQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNTITVKDSFPMPTVDELLDELYGAMYFSKLDLRSGYHQILVKPEDRCKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQSALRKFVLVFFDDILVYST-SWREHLIHL 152
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A0P5U4C5_9CRUS (Polyprotein of retroviral origin (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5U4C5_9CRUS) HSP 1 Score: 137 bits (345), Expect = 1.270e-37 Identity = 70/149 (46.98%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 4 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHL 450
+L ++ ES S F A IVMV KK GE RMC+D RALN IT K+PLP + D L + YF+ LD+L YW +++ E DK KTAF +Y FN M FGLTNAP+TF +N + + Y+FAL +LDD++ +S + T H+ HL
Sbjct: 62 MLSNKILRESHSPFAAAIVMVPKKDGEMRMCIDYRALNKITVKDKYPLPRIDDTIDALCGSVYFSILDLLSDYWQIEIEESDKHKTAFICEFGQYEFNRMPFGLTNAPSTFQRAMNNILKTVLYKFALVYLDDIIVFS-NSITDHVTHL 209
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A5N6P893_9ASTR (Reverse transcriptase domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P893_9ASTR) HSP 1 Score: 146 bits (368), Expect = 1.320e-37 Identity = 75/150 (50.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHL 450
D+L QG+I S S F++P+++V KK G R C+D RALNAIT P +FP+PT E+FD L A YF+ LD+L Y ++L+EG +KTAF + Y F VM FGLTNA +TF L+N +F+ F +F L F DD+L YSP + HL HL
Sbjct: 920 DMLAQGIIRPSYSPFSSPVLLVRKKDGTLRFCVDYRALNAITIPDRFPIPTIDELFDELHGAVYFSKLDLLSGYHQIRLQEGAITKTAFRTHDGHYEFLVMPFGLTNALSTFQRLMNDIFRPFLRKFVLVFFDDILIYSPT-WDEHLSHL 1068
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A392MG25_9FABA (Transposon Tf2-1 polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MG25_9FABA) HSP 1 Score: 143 bits (360), Expect = 3.570e-37 Identity = 73/150 (48.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHL 450
++L+QG+I S+S F++PI++V KK G R C D RALNAIT KFP+PT E+ D L A YF+ LD+ Y + ++ D+ KTAF + Y + VM FGLTNAPATF L+NK+FQ +F L F DD+L YSP ++ +HL HL
Sbjct: 141 EMLEQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNAITIKDKFPMPTVDELLDELYGAQYFSKLDLRSGYHQIMVKPEDRFKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILVYSP-SWNIHLQHL 289
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A8M8VDF3_SESIN (uncharacterized protein LOC105178433 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8VDF3_SESIN) HSP 1 Score: 144 bits (363), Expect = 6.110e-37 Identity = 71/155 (45.81%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHLSQSTT 465
D+L+ G+I + S + AP++ K G RMC D RALN IT +K+P+P + FD L+ A YFT +D+ YW V+++EGD++KT R + F VM FGLTNAPATFS L+N+V GF EF + +LDD++ YS R H+ HL Q T
Sbjct: 655 DMLESGIIKPAKSPYGAPVLFQKKADGSLRMCCDYRALNKITVKNKYPIPLVADCFDRLSRAKYFTKIDLRSGYWQVRIKEGDEAKTTVVTRYGAFEFLVMPFGLTNAPATFSTLMNQVLHGFLDEFVVVYLDDIVIYS-RTLAEHVDHLRQVLT 808
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Match: A0A392P4D4_9FABA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392P4D4_9FABA) HSP 1 Score: 135 bits (341), Expect = 6.820e-37 Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 1 DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTATEMFDNLAEAYYFTSLDMLWAYWSVQLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGFQYEFALCFLDDVLCYSPRNFTLHLYHL 450
++L+QG+I S+S F++PI++V KK G R C D RALNAIT FP+PT E+ D L A YF+ LD+ Y + ++ D+ KTAF + Y + VM FGLTNAPATF L+NK+FQ +F L F DD+L YS ++ HL HL
Sbjct: 56 EMLQQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELYGAKYFSKLDLRSGYHQILVQPDDRHKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQTALRKFVLVFFDDILVYSS-SWISHLSHL 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1262.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1262.1.1 >prot_H-akashiwo_Contig1262.1.1 ID=prot_H-akashiwo_Contig1262.1.1|Name=mRNA_H-akashiwo_Contig1262.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=159bp DLLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPback to top mRNA from alignment at H-akashiwo_Contig1262:132030..132506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1262.1.1 ID=mRNA_H-akashiwo_Contig1262.1.1|Name=mRNA_H-akashiwo_Contig1262.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1262:132030..132506- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1262:132030..132506- >mRNA_H-akashiwo_Contig1262.1.1 ID=mRNA_H-akashiwo_Contig1262.1.1|Name=mRNA_H-akashiwo_Contig1262.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1262:132030..132506- (Heterosigma akashiwo CCMP452)back to top |