mRNA_H-akashiwo_Contig1261.4.2 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A6V1NRX6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRX6_HETAK) HSP 1 Score: 672 bits (1733), Expect = 2.660e-242 Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 2
Query: 191 MALAKYAVKSNILNRSGHGPVAEKRWNKDTAEPLCVLDIEEGEYYTACKDKLYREGGHKPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCFRVLVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSIMRRYECNNTGNQDDGYLSLSSRTSSKSFLRGHDALSEQEHVATIAAENDAIMGQIAHEVSTALCRSAF 1174
MALAKYAVKSNILNRSGHGPVAEKRWNKDTAEPLCVLDIEEGEYYTACKDKLYREGGHKPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCFRVLVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSIMRRYECNNTGNQDDGYLSLSSRTSSKSFLRGHDALSEQEHVATIAAENDAIMGQIAHEVSTALCRSAF
Sbjct: 1 MALAKYAVKSNILNRSGHGPVAEKRWNKDTAEPLCVLDIEEGEYYTACKDKLYREGGHKPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCFRVLVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSIMRRYECNNTGNQDDGYLSLSSRTSSKSFLRGHDALSEQEHVATIAAENDAIMGQIAHEVSTALCRSAF 328
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: UPI001B280149 (Hemolysin III family protein n=1 Tax=bacterium TaxID=1869227 RepID=UPI001B280149) HSP 1 Score: 103 bits (256), Expect = 7.060e-22 Identity = 68/207 (32.85%), Postives = 100/207 (48.31%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGC----FRVLVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSIM 973
KP LRG H + FV L LL+ T + ++ LS FG S+ YHR+NW M+RLD+ IF +I G+YT + LL G ++ L+W+G ++G F V K +S + +V GC + PF+ + L + AL V+ R D P FG+HE FH L+ AAS+A + A S++
Sbjct: 9 KPLLRGVSHHVAFVVALLAGGLLVLGSHGAETMVASLVYALSLATLFGVSALYHRKNWQPAA-RMVMRRLDHSAIFLLIAGTYTPVCMLLLEPGVGKLLLGLVWAGAILGIAQSVFWVNAPKAVSATI-YVAFGCLVIPFLPQTAAALGGMRLALIAGGGALYALGAVVYALKRPDPWPAVFGYHEIFHALVIAASVAHFAAIASVV 213
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: UPI001F4616DE (hemolysin III family protein n=2 Tax=Leucobacter TaxID=55968 RepID=UPI001F4616DE) HSP 1 Score: 89.4 bits (220), Expect = 9.210e-17 Identity = 65/208 (31.25%), Postives = 105/208 (50.48%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGW---LFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGC-FRV--LVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSI 970
KP RG +H F P+ + +++ + W +F+L+ ++ FG S+ YHR NW + F +RLD+ IF +I G+YT AL L + G+ +++L+WSG L+G FRV + R V +VL+G + +I ++ H + V + L V+ R + +P FGFHE FH L T A + + AA +
Sbjct: 22 KPLWRGWIHAGTF---PVAVAAGIVLISVAHGPVAKWASAVFMLTSMLLFGISALYHRINWSPRTKQLF-RRLDHANIFLLIAGTYTPLALLALPHDQGILLLILVWSGALLGIGFRVFWIGAPRWLYVPLYVLLGWAAIMYIVDI-AHANLASMVLVVVGGLLYTLGSVVYGMKRPNPVPGVFGFHEIFHALTTIAFLCHWTAALLV 224
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A2D6PGN7_9ACTN (Hemolysin III n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6PGN7_9ACTN) HSP 1 Score: 89.0 bits (219), Expect = 9.870e-17 Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCFRVLVQKRMSNV------VSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLA-AFSIM 973
KP RG H + F A +++ + L+ LS + FG S+ YHR +W R M+RLD+ IF I +YT A+ L + V+ L W G L+G + V+ R + + ++L+G L P +++ HL + I L + VF R D P+TFGFHE FH+L A+ Y+A AF ++
Sbjct: 11 KPLFRGVTHRVAFTASLTLAPIMVVRAPGIAPRFVTALYCLSIVALFGVSALYHRIDWGPRG-RRVMRRLDHATIFVAIAATYTPVAVFALSSWAARLVLSLAWGGALIGTW---VRLRFPDAPTPAVALPYLLVGWCLLPVVADAWHHLGVAGFVLLLIGGLLYTSGAVVFAFRRPDPWPDTFGFHEVFHLLTVTAATLHYVAFAFIVL 216
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A2E0ZSX8_9ACTN (Hemolysin III n=2 Tax=root TaxID=1 RepID=A0A2E0ZSX8_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 1.320e-16 Identity = 65/207 (31.40%), Postives = 99/207 (47.83%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCF-RVLVQKRMSNVVS--FVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLA-AFSIM 973
KP RG H F+ A +++ + L+ LS + FG S+ YHR +W MQRLD+ IF I +YT A L + V+ L+W G L+G + R+ + VV+ ++++G L P +++ HL + I L + VF R D P+TFGFHE FH+L AA+ Y+A AF ++
Sbjct: 10 KPLFRGVAHRAAFIASLTLAPIMVVRAPGIVPRFVTALYCLSIVALFGVSALYHRVDWGPRG-RSVMQRLDHATIFVAIAATYTPVAAFALSPWAARLVLSLVWGGALIGTWVRLRFTDAPTPVVALPYLVVGWCLLPVVADAWHHLGVAGFVLLLIGGLLYTSGAVVFAFRRPDPWPDTFGFHEVFHLLTIAAAALHYVAFAFFVL 215
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A851HFE4_9MICC (Hemolysin III family protein n=1 Tax=Micrococcaceae bacterium TaxID=1904863 RepID=A0A851HFE4_9MICC) HSP 1 Score: 88.6 bits (218), Expect = 1.500e-16 Identity = 69/204 (33.82%), Postives = 100/204 (49.02%), Query Frame = 2
Query: 362 HKPRLRGTLHEIQFVCWPLYAHLLL---RELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCF---RVLVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHV--LITAASIAT 949
HKPRLRG +H I L A L+ E T QR + +F L +I FG+S+ YH NW T ++R+D+ IF +I G+YT A+ LL + ++ +IWSG L+G L R V ++L+G F+ + + S WC+ + + R + PNTFGFHE FH+ +I AS AT
Sbjct: 20 HKPRLRGWIHLIAAPI-ALVAGLIAIFQPEHTYQRVSVA--VFALCSVILFGSSAVYHLGNW-TPKVRAVLRRVDHSNIFLLIAGTYTPLAVLLLETSQTILLLSIIWSGALVGIAVRQLWLSAPRWVYVAVYLLLGWVAIWFLPDFYQAGGSAVVWCIVLGGVFYSLGAVAYGLKRPNPFPNTFGFHEVFHLCTVIAWASHAT 219
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A2E6XRM5_9ACTN (Hemolysin III n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E6XRM5_9ACTN) HSP 1 Score: 87.4 bits (215), Expect = 3.530e-16 Identity = 66/207 (31.88%), Postives = 102/207 (49.28%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMG-CFRVLVQKRMSNVVS--FVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLA-AFSIM 973
KP LRG H F A +++ + L+ LS + FG S+ YHR NW MQRLD+ IF I +YT A+ L + V+ ++W G L+G R+ +++V+ ++++G SL P +++ ++L + I L A VF R D P+TFGFHE FH+L AA+ Y+A AF ++
Sbjct: 12 KPLLRGVSHRSAFTASLTLAPIMIVVAPGIWPRFITALYSLSIVALFGVSALYHRINWGQRG-RLTMQRLDHVTIFVAIAAAYTPVAVFALSPWAMKVVLPMVWGGALLGMAIRLRYTDAPTSLVALPYLVVGWSLLPVVTDAWQNLGVAGFLLLLIGGLLYTAGGIVFAIRRPDPWPDTFGFHEIFHMLTVAAAALHYVAFAFIVL 217
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A2D6KJU9_9ACTN (Hemolysin III n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6KJU9_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 4.830e-16 Identity = 65/207 (31.40%), Postives = 102/207 (49.28%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCF-RVLVQKRMSNVVS--FVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLA-AFSIM 973
KP LRG H F A +++ + L+ LS + FG S+ YHR +W + MQRLD+ IF I +YT A+ L + V+ ++W G L+G R+ + + +V+ ++++G SL P +++ ++L + I L A VF R D P+TFGFHE FHVL A+ Y+A AF ++
Sbjct: 12 KPLLRGVSHRSAFTAALTLAPIMIVVAPGIWPRFITALYSLSIVALFGVSALYHRIDWSRRG-QLIMQRLDHITIFIAIAATYTPVAVFALSPRAMKVVLPMVWGGALIGAVVRLRSRDAPTPLVALPYLVVGWSLLPVVADAWQNLGVAGFVLLLIGGLLYTAGGIVFALRRPDPWPDTFGFHEVFHVLTVVAAALHYVAFAFIVL 217
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A0U4WV66_9MICO (Hemolysin III family protein n=2 Tax=Microcella alkaliphila TaxID=279828 RepID=A0A0U4WV66_9MICO) HSP 1 Score: 87.8 bits (216), Expect = 5.120e-16 Identity = 68/214 (31.78%), Postives = 107/214 (50.00%), Query Frame = 2
Query: 347 YREGGHKPRLRGTLHEIQFVCWPLYAHLLLRELTLQRTKITGW---LFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGC-FRV--LVQKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVYVFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSI 970
YR G KP RG +H F PL L L + L + W +F+LS L+ FG S+ YHR W ++ ++RLD+ IF +I G+YT +L L + GL +++L+WSG L+G FRV + R V ++L+G + +I +L+ + V A A+ ++ + + +P FGFHE FH L A + + A +
Sbjct: 40 YRAGEKKPTWRGWIHAGTF---PLAIVLGLVLVALGDGPMARWSSAVFVLSSLLLFGISATYHRFTW-SDRMRVLLKRLDHANIFLLIAGTYTPLSLLALPLDKGLILLVLVWSGALLGIGFRVFWITAPRWVYVPLYLLLGWAAVLYIGDLVAANVAMMVLIVAGGLAYTAGAI-IYGMKKPNPIPGVFGFHEIFHALTVVAFLCHWTATLLV 248
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Match: A0A849WSM1_9PROT (Hemolysin III family protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A849WSM1_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 5.600e-16 Identity = 62/211 (29.38%), Postives = 110/211 (52.13%), Query Frame = 2
Query: 365 KPRLRGTLHEIQFVCWPLYAHLLLRELTLQR-TKITGWLFLLSYLICFGASSQYHRRNWPTNDWERFMQRLDYCGIFFIITGSYTVPALCLLGDESGLAVMLLIWSGCLMGCFRVLV---QKRMSNVVSFVLIGCSLFPFISELLEHLSSFECWCVFISWALLGAAVY-----VFTSHRGDFLPNTFGFHETFHVLITAASIATYLAAFSI 970
KP LRG H+ F L A +L L T+ ++++S L +G SS YHR NW + ++++RLD+ IFF+I G+ T +L L E+G ++ + W L G + L + + + FVL+G + P+++E+ +L I+ + G ++Y ++ S + D +P+ FG+HE FH+L+ AS+ + F++
Sbjct: 6 KPILRGHFHQAAFFV-ALGAGSVLTALAKNSGTQQICLIYVISLLTMYGCSSLYHRINWQPSP-RKWLRRLDHAAIFFLIAGTGTPISLLGLKGEAGDNLLKIFWIMALAGVAKELFWIKAPKWLSAIFFVLMGWAGAPYLTEMKTNLGGTN-----IALLITGGSIYTIGALIYASKKPDPMPDFFGYHELFHLLVIIASVLHFAVVFNL 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1261.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1261.4.2 >prot_H-akashiwo_Contig1261.4.2 ID=prot_H-akashiwo_Contig1261.4.2|Name=mRNA_H-akashiwo_Contig1261.4.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=334bp MALAKYAVKSNILNRSGHGPVAEKRWNKDTAEPLCVLDIEEGEYYTACKDback to top mRNA from alignment at H-akashiwo_Contig1261:152526..154017- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1261.4.2 ID=mRNA_H-akashiwo_Contig1261.4.2|Name=mRNA_H-akashiwo_Contig1261.4.2|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1492bp|location=Sequence derived from alignment at H-akashiwo_Contig1261:152526..154017- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1261:152526..154017- >mRNA_H-akashiwo_Contig1261.4.2 ID=mRNA_H-akashiwo_Contig1261.4.2|Name=mRNA_H-akashiwo_Contig1261.4.2|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1002bp|location=Sequence derived from alignment at H-akashiwo_Contig1261:152526..154017- (Heterosigma akashiwo CCMP452)back to top |