mRNA_H-akashiwo_Contig1261.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 309 bits (791), Expect = 1.210e-101 Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1
Query: 1 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVRKLRRP 450
MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFT RNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIP LGHLASREGLKPDPKKIEAVRKLRRP
Sbjct: 173 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRP 322
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 309 bits (791), Expect = 1.730e-99 Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1
Query: 1 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVRKLRRP 450
MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFT RNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIP LGHLASREGLKPDPKKIEAVRKLRRP
Sbjct: 173 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRP 322
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 256 bits (653), Expect = 4.360e-83 Identity = 119/150 (79.33%), Postives = 135/150 (90.00%), Query Frame = 1
Query: 1 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVRKLRRP 450
MFD L AYYF+SLDMLWAYWSVPLR+ DK KTAFT RN+KYAFNVMCFGLTNAPATFSHLVNKVFQGCQ++FALCFLDDVLCY+ +F+LHL L +IF RM ANLKFKLPKC+FGAAQ+P LGH+A+REGLKPDPKKIEA++KL+RP
Sbjct: 35 MFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRP 184
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI) HSP 1 Score: 143 bits (361), Expect = 8.080e-37 Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 7 DNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVRKLRRP 450
D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ + +G +++ LC+LDD++ +S NF HL LSQ+ + AANL+ KC F A I +LGH+ S+ G++PDP KI+AV RP
Sbjct: 114 DSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFSS-NFEEHLERLSQVLSCLSAANLQLNTKKCTFAAKTIKILGHVISKHGIRPDPDKIKAVSDFPRP 260
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A015J1N0_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1N0_RHIIW) HSP 1 Score: 138 bits (348), Expect = 2.230e-36 Identity = 64/144 (44.44%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAV 432
+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAPATF ++KV G + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC F AA++ LGH+ +EG+KPDP+K+ +
Sbjct: 54 LLDSLQDAQWFTTLDLASGYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPATFQRTMDKVLHGIKEKFVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKCYFAAAELQFLGHVVGKEGVKPDPEKVNKM 196
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A131XQ77_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XQ77_IXORI) HSP 1 Score: 139 bits (351), Expect = 1.800e-35 Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 7 DNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAV 432
D L A Y+TSLD+ YW +P+ E DK+KTAF + + FNVM FGL NAPATF +++ + +G ++ LC+LDDV+ +S F HL LS++ + A L+ KC F A QI VLGHL SR+G++PDP+K+ AV
Sbjct: 130 DTLQGAKYYTSLDLRSGYWQIPMSESDKAKTAFVTPDGLFEFNVMPFGLCNAPATFERMIDSILRGLKWRTCLCYLDDVIVFSS-TFDEHLDRLSEVLSCISGAGLQLNTKKCHFAATQIKVLGHLVSRDGIRPDPEKVRAV 270
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: UPI001C177570 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C177570) HSP 1 Score: 137 bits (345), Expect = 1.040e-34 Identity = 64/144 (44.44%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAV 432
+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAPATF ++KV G + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC F AA++ LGH+ +EG+KPDP+K+ +
Sbjct: 491 LLDSLQDAQWFTTLDLASRYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPATFQRTMDKVLHGIKEKFVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKCHFAAAELQFLGHVVGKEGVKPDPEKVNKM 633
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: UPI001C1C713A (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C713A) HSP 1 Score: 133 bits (334), Expect = 1.270e-34 Identity = 62/145 (42.76%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 1 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVR 435
+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAP TF ++KV + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC F AA++ LGH+ +EG+KPDP+K+ ++
Sbjct: 112 LLDSLQDAQWFTTLDLASEYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPVTFQRTMDKVLHRIKEKFVLVYLDDVIIYS-KTFKDHIQHLKEVLNRIRKANLRLKAEKCHFAAAELQFLGHVVGKEGVKPDPEKVNKMK 255
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: A0A6G5A8Y6_RHIMP (Putative tick transposon (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5A8Y6_RHIMP) HSP 1 Score: 133 bits (334), Expect = 1.440e-34 Identity = 64/148 (43.24%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 7 DNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVRKLRRP 450
D L A +F+SLD+ YW VP+ EGD+ KTAF + Y F VM FGL NAPATF +++ V +G +++ LC+LDD++ +S +F HL L Q+ + A L+ L KC FGA ++ +LGH+ S++G+ PDP K+ AV +P
Sbjct: 194 DCLQGAEFFSSLDLRSGYWQVPMAEGDRPKTAFVTPDGLYEFTVMPFGLCNAPATFERMMDTVLRGLKWKTCLCYLDDIVVFSS-DFATHLSRLEQVLTCLSTARLQLNLKKCHFGARKLVILGHVVSKDGILPDPTKLNAVAAFPKP 340
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Match: L7MA76_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MA76_RHIPC) HSP 1 Score: 136 bits (343), Expect = 2.200e-34 Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 7 DNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPVLGHLASREGLKPDPKKIEAVRKLRRP 450
D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ V +G +++ LC+LDD++ +S F HL L ++ + +A L+ KC F I VLGH+ S++G++PDP KI AV + RP
Sbjct: 375 DSLQGAEYFSSLDLRSGYWQIPMHEDDKEKTAFATPDGLYEFNVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVIFSS-TFPQHLQRLDEVLTCLASAGLQLNTKKCCFATKSIKVLGHVVSKDGIRPDPDKIAAVLRFPRP 521 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1261.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1261.3.1 >prot_H-akashiwo_Contig1261.3.1 ID=prot_H-akashiwo_Contig1261.3.1|Name=mRNA_H-akashiwo_Contig1261.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=151bp MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTARNRKYAFNVMCFGback to top mRNA from alignment at H-akashiwo_Contig1261:112565..113017+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1261.3.1 ID=mRNA_H-akashiwo_Contig1261.3.1|Name=mRNA_H-akashiwo_Contig1261.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=453bp|location=Sequence derived from alignment at H-akashiwo_Contig1261:112565..113017+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1261:112565..113017+ >mRNA_H-akashiwo_Contig1261.3.1 ID=mRNA_H-akashiwo_Contig1261.3.1|Name=mRNA_H-akashiwo_Contig1261.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=453bp|location=Sequence derived from alignment at H-akashiwo_Contig1261:112565..113017+ (Heterosigma akashiwo CCMP452)back to top |