mRNA_H-akashiwo_Contig1261.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A6V1NGB2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NGB2_HETAK) HSP 1 Score: 197 bits (500), Expect = 8.600e-61 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVEVRAHKAILVAR 285
AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVEVRAHKAILVAR
Sbjct: 60 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVEVRAHKAILVAR 154
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A7S2W1Z2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1Z2_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.310e-36 Identity = 68/95 (71.58%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVEVRAHKAILVAR 285
AKHHGLRK+DLA++FTEEL+NDDTPESVFLQ+NDEIIVRK+R P+P EP +CP +F HM LL D EH DVT +VGP EVRAHKAILVAR
Sbjct: 58 AKHHGLRKDDLAFFFTEELQNDDTPESVFLQKNDEIIVRKRRKPQP-EPHVCPDKAYFKHMRFLLDDSEHKDVTFVVGPCKD-EVRAHKAILVAR 150
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: D7G2Y3_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Y3_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.930e-25 Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPP--------EPE-ICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVEVRAHKAILVAR 285
AKHHGLRK+DLAYYFTEEL+N+DTPE+VFL DEI+VR+++ +P+ +CP F + MG+LL D EH DVT VGP EV+AHK LVAR
Sbjct: 66 AKHHGLRKDDLAYYFTEELQNEDTPETVFLLVRDEIVVRRRKSKSDSVSDDEAEVDPDSLCPDDMFIEQMGSLLDDDEHCDVTFFVGPSR-TEVKAHKTHLVAR 168
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A836CHY6_9STRA (BTB/POZ protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY6_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.490e-24 Identity = 59/103 (57.28%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEP------EICPVS--KFFDHMGALLQDKEHMDVTLLVGPDPPVEVRAHKAILVAR 285
AKHHGLRKEDLAYYFTE L+N+DTPES+FLQ DE+IVRK+R + E E S +F GALL D EH DVT VG D V+AHK +LVAR
Sbjct: 65 AKHHGLRKEDLAYYFTEALQNEDTPESIFLQPRDEVIVRKRRLNQSDEDSEDDDIEDLKASGERFISQFGALLADDEHCDVTFFVG-DAKAPVKAHKVVLVAR 166
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: K0SW24_THAOC (BTB domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW24_THAOC) HSP 1 Score: 103 bits (256), Expect = 5.610e-24 Identity = 59/115 (51.30%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGP--------------------DPPVEVRAHKAILVAR 285
AK+HGLRK+DL YYF LEN+DTPE+V LQR D I+VRKKR P+PPEP ++FF M LL D+EHMD LV P D VE+RAHK IL AR
Sbjct: 69 AKYHGLRKDDLEYYFVNPLENEDTPETVQLQRGDIIMVRKKRKPEPPEP-AADDTEFFKDMKELLDDEEHMDTVFLVHPTGGASKAGTKRRADSSPVSDDDLVEIRAHKCILTAR 182
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A6U4KVI1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KVI1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.860e-22 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPP-KPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVE-VRAHKAILVAR 285
AKHHGLRK+DL YYFTE+L+ DDTP SV L +NDEIIVRKKR K +C +F + LL D EH D + ++ +P E + AHKA+L AR
Sbjct: 58 AKHHGLRKDDLVYYFTEQLQPDDTPASVHLLKNDEIIVRKKREEEKEAMDPMCSDETYFQNFSRLLSDTEHCDCSFVLSNEPDEEPISAHKAVLTAR 154
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A6U5DPK9_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5DPK9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.880e-21 Identity = 53/112 (47.32%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDP-----------------PVEVRAHKAILVAR 285
AK+HGLRK+DL YYF LEN+DTPESV LQR D I+VRKKR P PP+ S+FF M L+ D +HMD ++ P P E+RAHK +L AR
Sbjct: 68 AKYHGLRKDDLEYYFVNPLENEDTPESVQLQRADTIMVRKKRKPDPPKA-AADDSEFFKDMKELMDDVDHMDAVFVIEPPDADNSSSSSDGDKQNNRQPTEIRAHKCVLTAR 178
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: B7GB01_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GB01_PHATC) HSP 1 Score: 95.9 bits (237), Expect = 1.880e-21 Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPV--EVRAHKAILVAR 285
AK+HGLRKEDL YYF LEN+DTPESV LQR D I+VRK+R +PPE +F M LL D+EHMD ++ D E+RAHK++L AR
Sbjct: 64 AKYHGLRKEDLEYYFVNLLENEDTPESVQLQRGDTIMVRKRRKHEPPEA-AADDEEFIKDMRELLDDEEHMDAVFVLNKDMDCQQEIRAHKSVLTAR 159
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A7R9Y833_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y833_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.780e-21 Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPE-ICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPVE-VRAHKAILVAR 285
AKHHGLRK+DL YYFTE+L DDTP SV L +NDEIIVRKKR + + +C +F++ LL D EH D + ++ +P E +RAHKAIL AR
Sbjct: 89 AKHHGLRKDDLVYYFTEQLLPDDTPASVHLLKNDEIIVRKKREEETEHMDPMCSDETYFENFSRLLTDTEHCDCSFVLRSEPDGEPIRAHKAILGAR 185
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Match: A0A7S1D044_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D044_CYCTE) HSP 1 Score: 93.2 bits (230), Expect = 1.450e-20 Identity = 54/110 (49.09%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 1 AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEICPVSKFFDHMGALLQDKEHMDVTLLVGPDPPV---------------EVRAHKAILVAR 285
AK+HGLRK+DL YYF LEN+DTPESV LQR D I+VRK+R P PPE +FF M LL D+EHMD V + V ++RAHK IL AR
Sbjct: 20 AKYHGLRKDDLEYYFVNPLENEDTPESVQLQRGDTIMVRKRRKPDPPEV-ASNDDEFFKDMAELLDDEEHMDTVFHVPQETGVKGEASAELSKSENVVQIRAHKCILTAR 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1261.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1261.1.1 >prot_H-akashiwo_Contig1261.1.1 ID=prot_H-akashiwo_Contig1261.1.1|Name=mRNA_H-akashiwo_Contig1261.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=104bp AKHHGLRKEDLAYYFTEELENDDTPESVFLQRNDEIIVRKKRPPKPPEPEback to top mRNA from alignment at H-akashiwo_Contig1261:26033..28274- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1261.1.1 ID=mRNA_H-akashiwo_Contig1261.1.1|Name=mRNA_H-akashiwo_Contig1261.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2242bp|location=Sequence derived from alignment at H-akashiwo_Contig1261:26033..28274- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1261:26033..28274- >mRNA_H-akashiwo_Contig1261.1.1 ID=mRNA_H-akashiwo_Contig1261.1.1|Name=mRNA_H-akashiwo_Contig1261.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=312bp|location=Sequence derived from alignment at H-akashiwo_Contig1261:26033..28274- (Heterosigma akashiwo CCMP452)back to top |