mRNA_H-akashiwo_Contig1260.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1260.3.1
Unique NamemRNA_H-akashiwo_Contig1260.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A7J5Y484_DISMA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Dissostichus mawsoni TaxID=36200 RepID=A0A7J5Y484_DISMA)

HSP 1 Score: 69.3 bits (168), Expect = 3.170e-12
Identity = 43/78 (55.13%), Postives = 50/78 (64.10%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNRNIHLA 234
            NIH I  I   LPVTT S   ERS S LRRLKTWLRSS+G DRL+ LA M  + +  +D EKVL  W  + +R I LA
Sbjct:  215 NIHCILSIYLTLPVTTCSC--ERSFSALRRLKTWLRSSIGNDRLSGLAMMHVHRNRALDPEKVLKRWDASGHRRIVLA 290          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A7J5XI06_DISMA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Dissostichus mawsoni TaxID=36200 RepID=A0A7J5XI06_DISMA)

HSP 1 Score: 66.6 bits (161), Expect = 4.990e-12
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNRNI 225
            NIH I  I   LPVTT S   ERS S LRRLKTWLRSS+G DRL+ LA M  + +  +D EKVL  W  + +R++
Sbjct:   50 NIHCILSIYLTLPVTTCSC--ERSFSALRRLKTWLRSSIGNDRLSGLAMMHVHRNRALDPEKVLKRWDASGHRHM 122          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A8B6C9E4_MYTGA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6C9E4_MYTGA)

HSP 1 Score: 67.0 bits (162), Expect = 5.910e-12
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNR 219
            +I  IF IL  +PVTTS++  ERS S LRRLKT+LRS+M +DRL+ LA +  + + D+D E+VL  + +AKNR
Sbjct:  107 SIFAIFAILVTMPVTTSTT--ERSFSSLRRLKTYLRSTMVQDRLSSLALIHVHREMDIDTERVLRSFALAKNR 177          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: X1XNI1_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XNI1_ACYPI)

HSP 1 Score: 65.5 bits (158), Expect = 9.400e-12
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNRNI 225
            NI +I  I++ LP++ +S+  ERS S LRRLKTWLR  M +DRL  LA +  + + D+ E+K++  +  +KNRNI
Sbjct:   61 NIKLILTIISTLPISVASA--ERSFSTLRRLKTWLRKKMSQDRLCGLALLHIHRELDISEDKIIERFANSKNRNI 133          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: UPI0015AF0604 (52 kDa repressor of the inhibitor of the protein kinase-like n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AF0604)

HSP 1 Score: 65.5 bits (158), Expect = 1.210e-11
Identity = 41/78 (52.56%), Postives = 49/78 (62.82%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNRNIHLA 234
            NI  I  I   LPVTT S   ERS S LR+LKTWLRSSMG +RL+ LA M  + +  +D EKVL  W  + +R I LA
Sbjct:   70 NIRCILSIYLTLPVTTCSC--ERSFSALRQLKTWLRSSMGNERLSGLAMMHVHRNRALDPEKVLRRWDASGHRRIALA 145          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A6P7G926_DIAVI (52 kDa repressor of the inhibitor of the protein kinase-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7G926_DIAVI)

HSP 1 Score: 67.8 bits (164), Expect = 1.850e-11
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNR 219
            N+H +  ILAVLPVTT+++  ERS S LRRLKT+LRS+M EDRLN LA +  + D +VD ++VL +++    R
Sbjct:  486 NVHQMLRILAVLPVTTATN--ERSFSTLRRLKTYLRSTMSEDRLNELASLNIHRDVEVDPQRVLEKFFSTPRR 556          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A6P7G3G5_DIAVI (52 kDa repressor of the inhibitor of the protein kinase-like n=3 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7G3G5_DIAVI)

HSP 1 Score: 67.4 bits (163), Expect = 2.280e-11
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNR 219
            N+H +  ILAVLPVTT+++  ERS S LRRLKT+LRS+M EDRLN LA +  + D +VD ++VL +++    R
Sbjct:  297 NVHQMLRILAVLPVTTATN--ERSFSTLRRLKTYLRSTMSEDRLNGLASLNIHRDVEVDPQRVLEKFFSTPRR 367          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A6P7GW62_DIAVI (52 kDa repressor of the inhibitor of the protein kinase-like n=2 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GW62_DIAVI)

HSP 1 Score: 67.4 bits (163), Expect = 2.520e-11
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNR 219
            N+H +  ILAVLPVTT+++  ERS S LRRLKT+LRS+M EDRLN LA +  + D +VD ++VL +++    R
Sbjct:  452 NVHQMLRILAVLPVTTATN--ERSFSTLRRLKTYLRSTMSEDRLNGLASLNIHRDVEVDPQRVLEKFFSTPRR 522          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A671USN7_SPAAU (52 kDa repressor of the inhibitor of the protein kinase-like n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671USN7_SPAAU)

HSP 1 Score: 67.0 bits (162), Expect = 3.420e-11
Identity = 42/78 (53.85%), Postives = 48/78 (61.54%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNRNIHLA 234
            NIH I  I   LPVTT S   ERS S LRRLKTWLRSSMG +RL+ LA M  +    +D  KVL  W  + +R I LA
Sbjct:  404 NIHCILSIYLTLPVTTCSC--ERSFSALRRLKTWLRSSMGNERLSGLAMMHVHKHRALDPVKVLRRWDASGHRRIALA 479          
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Match: A0A8B6E8D2_MYTGA (Plasma kallikrein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6E8D2_MYTGA)

HSP 1 Score: 67.0 bits (162), Expect = 3.420e-11
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFMMANPDFDVDEEKVLHEWYMAKNR 219
            +I  IF IL  +PVTTS++  ERS S LRRLKT+LRS+M +DRL+ LA +  + + D+D E+VL  + +AKNR
Sbjct:  410 SIFAIFAILVTMPVTTSTT--ERSFSSLRRLKTYLRSTMVQDRLSSLALIHVHREMDIDTERVLRSFALAKNR 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1260.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J5Y484_DISMA3.170e-1255.13Dimer_Tnp_hAT domain-containing protein n=1 Tax=Di... [more]
A0A7J5XI06_DISMA4.990e-1253.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Di... [more]
A0A8B6C9E4_MYTGA5.910e-1252.05Dimer_Tnp_hAT domain-containing protein n=1 Tax=My... [more]
X1XNI1_ACYPI9.400e-1245.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ac... [more]
UPI0015AF06041.210e-1152.5652 kDa repressor of the inhibitor of the protein k... [more]
A0A6P7G926_DIAVI1.850e-1152.0552 kDa repressor of the inhibitor of the protein k... [more]
A0A6P7G3G5_DIAVI2.280e-1152.0552 kDa repressor of the inhibitor of the protein k... [more]
A0A6P7GW62_DIAVI2.520e-1152.0552 kDa repressor of the inhibitor of the protein k... [more]
A0A671USN7_SPAAU3.420e-1153.8552 kDa repressor of the inhibitor of the protein k... [more]
A0A8B6E8D2_MYTGA3.420e-1152.05Plasma kallikrein n=1 Tax=Mytilus galloprovinciali... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1260contigH-akashiwo_Contig1260:204016..204249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7029.ACYPI065245-PA
PFAMsDUF4371,Dimer_Tnp_hAT
Model size234
Max annot lvl33208|Metazoa
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.74e-11
EggNOG OGs28IIP@1|root,2QQVP@2759|Eukaryota,39TA7@33154|Opisthokonta,3CNWS@33208|Metazoa,3D3DK@33213|Bilateria
DescriptionDomain of unknown function (DUF4371)
Cds size234
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387136.705047-CDS-H-akashiwo_Contig1260:204015..2042491681387136.705047-CDS-H-akashiwo_Contig1260:204015..204249Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1260 204016..204249 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1260.3.1prot_H-akashiwo_Contig1260.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1260 204016..204249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1260.3.1

>prot_H-akashiwo_Contig1260.3.1 ID=prot_H-akashiwo_Contig1260.3.1|Name=mRNA_H-akashiwo_Contig1260.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=78bp
NIHIIFLILAVLPVTTSSSSVERSVSLLRRLKTWLRSSMGEDRLNVLAFM
MANPDFDVDEEKVLHEWYMAKNRNIHLA
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mRNA from alignment at H-akashiwo_Contig1260:204016..204249+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1260.3.1 ID=mRNA_H-akashiwo_Contig1260.3.1|Name=mRNA_H-akashiwo_Contig1260.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=234bp|location=Sequence derived from alignment at H-akashiwo_Contig1260:204016..204249+ (Heterosigma akashiwo CCMP452)
AATATTCACATTATATTTCTGATTCTAGCTGTACTTCCAGTAACAACATC ATCATCATCAGTAGAGAGGAGTGTGAGCCTGCTACGCCGGCTAAAAACTT GGTTGCGCAGCAGCATGGGGGAGGACCGCTTAAATGTACTGGCATTTATG ATGGCAAACCCAGACTTTGATGTGGATGAAGAAAAGGTTCTGCATGAGTG GTATATGGCAAAGAATAGAAACATTCATCTTGCA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1260:204016..204249+

>mRNA_H-akashiwo_Contig1260.3.1 ID=mRNA_H-akashiwo_Contig1260.3.1|Name=mRNA_H-akashiwo_Contig1260.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=234bp|location=Sequence derived from alignment at H-akashiwo_Contig1260:204016..204249+ (Heterosigma akashiwo CCMP452)
AATATTCACATTATATTTCTGATTCTAGCTGTACTTCCAGTAACAACATC
ATCATCATCAGTAGAGAGGAGTGTGAGCCTGCTACGCCGGCTAAAAACTT
GGTTGCGCAGCAGCATGGGGGAGGACCGCTTAAATGTACTGGCATTTATG
ATGGCAAACCCAGACTTTGATGTGGATGAAGAAAAGGTTCTGCATGAGTG
GTATATGGCAAAGAATAGAAACATTCATCTTGCA
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