mRNA_H-akashiwo_Contig126.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig126.1.1
Unique NamemRNA_H-akashiwo_Contig126.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A835ZI69_9STRA (ATPase ASNA1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI69_9STRA)

HSP 1 Score: 356 bits (913), Expect = 4.310e-119
Identity = 195/347 (56.20%), Postives = 237/347 (68.30%), Query Frame = 1
Query:   16 EPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFE--NLYCMEIEPTVEVDEM----EGLDDEAAGPLKS--------------------------IMDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLYEDFHVCLMPLLDHEVRGVERLRDFSAKLIQSEDA 960
            + LE +L+N++DQESL+WIFVGGKGG  +      +   +    +    ++  P         +   +   LVNG +  NLYCME+EPT++V+++    EG+  EAA  LK+                          +M+FSCI+FDTAPTGHTLRLLSFPTIMDKAL KI+ALK KF+G   QF  M G GG S PD L+ K EQMR +IN+VNDQFKDPERTTFVCV IPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFP+KDI  L  W++ E+A+LS EA+ II KTM+RK+MQDKYI QI  LYEDFHV LMPLLDHEVRGV  L+ FS +L+   DA
Sbjct:    8 DTLESSLRNLVDQESLQWIFVGGKGGVGKTTTSCCVAIQMARARESVLVISTDPAHNLSDAFGQKFTKDPTLVNGLDVKNLYCMEVEPTMDVEDLAGETEGMSSEAADGLKNMFADMSTSIPGVDEAMSFAELMKMVQVMNFSCIIFDTAPTGHTLRLLSFPTIMDKALTKIMALKDKFAGALGQFGAMFGAGGAS-PDDLMGKLEQMRDIINKVNDQFKDPERTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPNKDIGDLQKWYESEEATLSGEAKSIICKTMSRKRMQDKYIGQILDLYEDFHVVLMPLLDHEVRGVPLLQAFS-ELLMDPDA 352          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A6H5KTV8_9PHAE (ATPase ASNA1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV8_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.470e-118
Identity = 193/348 (55.46%), Postives = 238/348 (68.39%), Query Frame = 1
Query:    1 MADEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEM---EGLDDEAAGPLKSI--------------------------MDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLYEDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            MAD  E L+ +LKN++DQESL+WIFVGGKGG  +      +   +    +    ++  P         +   +   LVNGF+NLYCME+EPTV++DE+   +G+  +AA  +K +                          M+FSCIVFDTAPTGHTLRLLSFPTIMDKAL K++ LK+KFSGLFSQF  M G GG +  D +  K  Q++ +IN+VNDQFKDP++TTFVCV IPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFP KDI  L  W+  E+ +LS+EA+ II KT+ARK+MQDKYI QI+ LYEDFHV LMPLLDHEVRGV  L  FS  L++ ED
Sbjct:    1 MADFGE-LDPSLKNLVDQESLQWIFVGGKGGVGKTTTSCCVAAQMSKARESVLIISTDPAHNLSDAFGQKFTKDPTLVNGFDNLYCMEVEPTVDMDELAVTDGMSQDAADGIKGMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSKLMDLKNKFSGLFSQFGNMFGAGGATEDD-MFGKLLQLKEIINKVNDQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGDLQKWYSTEEGTLSTEAKSIICKTLARKRMQDKYIGQIYDLYEDFHVVLMPLLDHEVRGVPHLNAFSELLMKPED 346          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A7S2AZ07_9STRA (ATPase ASNA1 homolog n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZ07_9STRA)

HSP 1 Score: 333 bits (854), Expect = 3.080e-110
Identity = 181/345 (52.46%), Postives = 228/345 (66.09%), Query Frame = 1
Query:    7 DEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEME------------------------GLDDEA--AGPLKSI--MDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLYEDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            D++EPL  +LKN+++QESL+WIFVGGKGG  +      L   L         V+  P         +  G+    V G++NL+CMEI+P +E+DE+                         G+D+    A  +K +  MD+  IVFDTAPTGHTLRLLSFP+++ KA DKI+ALK++FSGLF+Q  GMMG    S  D LL K EQ R VI +VN  FKDP +TTFVCV IPEFLSLYETERLVQELTK + DTHNIVVNQVLFPDKD   LT W++ EK  LS  +QD++SK +ARK+MQDKY+NQI+ LYEDFHV LMPLL+HEVRG ++L  FS  L+ +ED
Sbjct:    7 DDLEPLPASLKNVVEQESLQWIFVGGKGGVGKTTTSCCLALQLAKTRAKVLVVSTDPAHNLSDAFAQKFGKDPTAVTGYDNLFCMEIDPEIEMDELAEVTGPGAEANGIQSLMQDLTKAIPGIDEAMSFAELMKQVQAMDYDVIVFDTAPTGHTLRLLSFPSMLGKAFDKIMALKNRFSGLFTQMQGMMGPDMPSE-DMLLGKLEQTREVIERVNLTFKDPTKTTFVCVCIPEFLSLYETERLVQELTKLDFDTHNIVVNQVLFPDKDATQLTEWYEEEKPKLSETSQDLLSKLLARKRMQDKYVNQIWDLYEDFHVVLMPLLNHEVRGSDKLESFSEHLVDAED 350          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A7S2SEK5_9STRA (ATPase ASNA1 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK5_9STRA)

HSP 1 Score: 327 bits (839), Expect = 6.340e-108
Identity = 178/348 (51.15%), Postives = 227/348 (65.23%), Query Frame = 1
Query:    4 ADEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEMEGLDDEAAGP----------------------------LKSI--MDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLYEDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            A  +E L  +L+N+++Q++L+WIFVGGKGG  +      L   L    +    V+  P         +   +    VNGFENL+CMEI+P VEVDE+  L+  AAG                             +K +  MD+  IVFDTAPTGHTLRLLSFPT++ KA DKI+ALK+ F GL SQF+ MMG    S  + LL + EQ R VI +VN  FKDP +TTFVCV IPEFLSLYETERLVQELTKF+IDTHN+VVNQVLFPDKD   L+ W+  E+  LS EA++++ K +ARK+MQDKY+NQI+ LYEDFHV LMPLL+HEVRG ++LR FS  L++ E+
Sbjct:    8 AQNLEALSPSLRNVVEQDTLQWIFVGGKGGVGKTTTSCCLAIQLAKVRQKVLVVSTDPAHNLSDAFAQKFSKEPTQVNGFENLFCMEIDPDVEVDELAELNGSAAGGAMGGIQKLMQDLTQAIPGIDEAMSFAELMKQVQTMDYDVIVFDTAPTGHTLRLLSFPTMLGKAFDKIMALKNSFGGLLSQFSSMMGSQMPSE-EMLLGRLEQTREVIERVNLTFKDPTKTTFVCVCIPEFLSLYETERLVQELTKFDIDTHNVVVNQVLFPDKDAQELSEWYTTEEPKLSPEARELLGKLLARKRMQDKYVNQIWDLYEDFHVVLMPLLNHEVRGSDKLRAFSEHLVEEEE 354          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A1E7FED7_9STRA (ATPase ASNA1 homolog n=5 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FED7_9STRA)

HSP 1 Score: 312 bits (800), Expect = 5.570e-102
Identity = 175/352 (49.72%), Postives = 221/352 (62.78%), Query Frame = 1
Query:    7 DEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEME------GLDDEAAGPLKSIM--------------------------DFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGN--SNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLY-EDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            D+ +  E +LKNI+DQ SL+W+FVGGKGG  +      L   L    K    V+  P         +  GR    + GF NL  MEI+   +++EM+      G DDE  G L S+M                          DF  +VFDTAPTGHTLRLLSFPTI++KAL K++ LK +F GL  Q   MMGGG N  +  DA++ + E+ R VIN+VND F+DP  TTFVCV IPEFLS+YETERLVQEL+KF IDTHNIVVNQVLFP+KD + L+ W++G K +L +EA++I  K ++RK+MQDKYI Q F LY EDFHV LMPLLD+EVRGVE+L+ FS  L    D
Sbjct:    8 DDADLPEPSLKNIIDQHSLQWVFVGGKGGVGKTTTSCCLGIQLAKTRKKVLIVSTDPAHNLSDAFCQKIGREPTPIEGFHNLSAMEIDANNDMEEMQRNMEEQGADDEKDGGLSSMMSELTNSIPGIDEAMSFSELMKQVQSLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMMGGGNNPGATQDAIVGRLEETRVVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDTHNIVVNQVLFPEKDAEELSEWYEGNKDTLPTEAREICGKMLSRKRMQDKYIGQCFDLYGEDFHVSLMPLLDYEVRGVEKLKGFSEFLTNPVD 359          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A7R9ZQE1_9STRA (ATPase ASNA1 homolog n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQE1_9STRA)

HSP 1 Score: 308 bits (789), Expect = 2.330e-100
Identity = 175/344 (50.87%), Postives = 216/344 (62.79%), Query Frame = 1
Query:   25 EGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEME------GLDD---------EAAGPLKSI---------------MDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGN--SNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLY-EDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            E +LKNI+DQ+SL+W+FVGGKGG  +      L   L    K    V+  P         +  GR    + GF+NL  MEI+   +++EM+      G DD         E    +  I               +DF  +VFDTAPTGHTLRLLSFPTI++KAL K++ LK +F GL  Q   M+G G N  +  DA+L + E  R VIN+VND F+DP  TTFVCV IPEFLS+YETERLVQEL+KF ID HNIVVNQV+FP+KD + L  W+D  KASL SEAQ+I SK MARK+MQDKYI Q F LY EDFHV LMPLLD+EVRG ++L+DFS  LI   D
Sbjct:   13 EPSLKNIIDQKSLQWVFVGGKGGVGKTTTSCCLGVQLAKSRKKVLIVSTDPAHNLSDAFCQKIGREPTPIQGFDNLCAMEIDANNDMEEMQRNMQEQGTDDDDGLSAMMSELTSSIPGIDEAMSFSELMKQVQGLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMLGSGSNPANAQDAILGRLEDTRAVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDAHNIVVNQVIFPEKDAEELAEWYDKTKASLPSEAQEICSKMMARKRMQDKYIGQCFDLYGEDFHVTLMPLLDYEVRGTDKLKDFSEFLIDPVD 356          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: W7U3J2_9STRA (ATPase ASNA1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3J2_9STRA)

HSP 1 Score: 305 bits (781), Expect = 5.360e-99
Identity = 174/343 (50.73%), Postives = 217/343 (63.27%), Query Frame = 1
Query:   25 EGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEME----------GLDDEAAGPLKSI--------------------------MDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLYEDFHVCLMPLLDHEVRGVERLRDFSAKLI 945
            E +L+NI++ + LKWIFVGGKGG  +      L   L    +    ++  P         +  G+    V+GFENL+ MEI+P+ + +EM           G + E  G L+S+                          MD+S +VFDTAPTGHTLRLLSFP+ ++ A  KI+A K+KFSGL SQF GMMG    +  DALL K +Q R  I +VN QF+DP+ TTFVCV I EFLS+YETERLVQEL KFEIDTHNIVVNQVLFPDKD   ++ W +  KA+L  EA +IISK +ARK+MQDKYINQ+F LYEDFHV LMPLLDHEVRGV+ LR FS  L+
Sbjct:   25 EASLRNIIESD-LKWIFVGGKGGVGKTTTSCCLAIQLAKVRESVLIISTDPAHNLSDAFGQKFGKEPGKVDGFENLFVMEIDPSFDWEEMNAMVARSGSIPGAEGEGGG-LQSMLQELTSSIPGIDEIISFAELMKQVEQMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKIMAFKNKFSGLMSQFGGMMGQPPGAE-DALLGKLDQTRDTIEKVNKQFRDPQATTFVCVCIAEFLSIYETERLVQELAKFEIDTHNIVVNQVLFPDKDATEMSAWHEKTKATLPGEANEIISKFLARKRMQDKYINQVFDLYEDFHVVLMPLLDHEVRGVKSLRRFSEALL 364          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A7S0CCI9_9STRA (ATPase ASNA1 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCI9_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.020e-96
Identity = 165/352 (46.88%), Postives = 213/352 (60.51%), Query Frame = 1
Query:    7 DEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEMEGL--------DDEAAGPLKSIM--------------------------DFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLY-EDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            D+ +  + +L+NI+DQ+SL+W+FVGGKGG  +      L   L         V+  P         +  GR    + GF NL+ MEI+   ++++++          DD++ G + ++M                          D+  +VFDTAPTGHTLRLLSFPTIM+KAL K++ LK KF G+  Q A M GG G    D L  K E+ R +IN+VND F+DP+ TTFVCV IPEFLS+YETERLVQEL+KF ID+HNIVVNQVLFP+KD + +  W       L  EAQDI  K MARK+MQDKYI Q F LY +DFHV LMPLLDHEVRGVE++ DFS  L+   D
Sbjct:   28 DDSDLPDPSLRNIIDQKSLQWVFVGGKGGVGKTTTSCALGVQLAKSRDKVLLVSTDPAHNLSDAFSQKIGRDPTPIQGFTNLHAMEIDANDDMEKLQQQMEHATASDDDDSNGGISALMAELTSSIPGIDEAMSFSELMKQVQSLDYDIVVFDTAPTGHTLRLLSFPTIMEKALGKVMELKDKFGGILGQAASMFGGNGAQMQDMLTGKLEETRAIINKVNDAFQDPDTTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEEMGEWLKENNDKLPKEAQDICGKMMARKRMQDKYIGQCFDLYGDDFHVVLMPLLDHEVRGVEKIADFSESLVDPVD 379          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A7R9W353_9STRA (ATPase ASNA1 homolog n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W353_9STRA)

HSP 1 Score: 296 bits (759), Expect = 8.500e-96
Identity = 170/356 (47.75%), Postives = 217/356 (60.96%), Query Frame = 1
Query:    7 DEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEMEGLDDEAAGP--------------------------------LKSI--MDFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSNP----DALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLY-EDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            D+ +  E +LKNI+DQ SL+W+FVGGKGG  +      L   L    +    V+  P         +  GR    + GF NL  MEI+   ++++M+   +EA G                                 +K +  +D+  +VFDTAPTGHTLRLLSFPTI++KAL K++ LK +F GL SQ + + GGG   NP    + LL + E+ R VIN+VND F+DP+ TTFVCV IPEFLS+YETERLVQEL+KF ID+HNIVVNQVLFP+KD + L  W D  KA L  EAQ+I  K MARKKMQDKYI Q F LY +DF V LMPLLD+EVRGV++L DFS  L+   D
Sbjct:    5 DDSDLPEPSLKNIIDQNSLQWVFVGGKGGVGKTTTSCCLGIQLAQSRQKVLIVSTDPAHNLSDAFCQKIGREPTPIAGFSNLSAMEIDANDDMEKMQQSMEEATGTAGEADDSGINALMAELTSSIPGIDEAMSFAELMKQVQNLDYDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLISQASALFGGG---NPGQMQEMLLGRLEETRAVINKVNDAFRDPDLTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEELEEWLDANKAGLPREAQEICGKMMARKKMQDKYIGQCFDLYGDDFSVVLMPLLDYEVRGVKKLEDFSENLVNPVD 357          
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Match: A0A7S2RG80_9STRA (ATPase ASNA1 homolog n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RG80_9STRA)

HSP 1 Score: 294 bits (753), Expect = 7.070e-95
Identity = 171/353 (48.44%), Postives = 216/353 (61.19%), Query Frame = 1
Query:    7 DEMEPLEGTLKNILDQESLKWIFVGGKGGGVRPPLPAHLQFSLLG*GKCPGCVNRSPPTT*VMHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEMEGLDDEAAGP--------LKSIM--------------------------DFSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMGGGGNSN-PDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDIISKTMARKKMQDKYINQIFQLY-EDFHVCLMPLLDHEVRGVERLRDFSAKLIQSED 957
            DE    + +LKNI+DQ+SL+WIFVGGKGG  +      L   L    K    V+  P         +  GR    +NGF NL  MEI+   ++++++    EA G         + S+M                          D+  +VFDTAPTGHTLRLLSFPTI++KAL K++ LK +F GL  Q + + GGG      D L+ + E+ R VIN+VN+ F++PE TTFVCV IPEFLS+YETERLVQEL+KF ID HNI+VNQVLFP+KD + L  W D  KASL  EAQ+I SK MARKKMQDKYI Q F LY +DFHV LMPLLD EVRGV+RL++FS  L+   D
Sbjct:    6 DEENLPDPSLKNIIDQDSLQWIFVGGKGGVGKTTSSCCLAAQLTLTRKKVLIVSTDPAHNLSDAFCQKIGREPTPINGFTNLSAMEIDANDDMEKVQQSMVEAGGAGTDADDSGITSLMAELTSSIPGIDEAMSFSELMKQVQNLDYDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQASAIFGGGSPGQVQDMLVGRLEETRAVINKVNEAFQNPELTTFVCVCIPEFLSIYETERLVQELSKFGIDCHNILVNQVLFPEKDAEELGDWLDENKASLPKEAQEICSKMMARKKMQDKYIGQCFDLYGDDFHVVLMPLLDWEVRGVDRLKEFSEHLVNPVD 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig126.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZI69_9STRA4.310e-11956.20ATPase ASNA1 homolog n=1 Tax=Tribonema minus TaxID... [more]
A0A6H5KTV8_9PHAE2.470e-11855.46ATPase ASNA1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A7S2AZ07_9STRA3.080e-11052.46ATPase ASNA1 homolog n=1 Tax=Florenciella parvula ... [more]
A0A7S2SEK5_9STRA6.340e-10851.15ATPase ASNA1 homolog n=1 Tax=Rhizochromulina marin... [more]
A0A1E7FED7_9STRA5.570e-10249.72ATPase ASNA1 homolog n=5 Tax=Bacillariaceae TaxID=... [more]
A0A7R9ZQE1_9STRA2.330e-10050.87ATPase ASNA1 homolog n=1 Tax=Craspedostauros austr... [more]
W7U3J2_9STRA5.360e-9950.73ATPase ASNA1 homolog n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S0CCI9_9STRA1.020e-9646.88ATPase ASNA1 homolog n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9W353_9STRA8.500e-9647.75ATPase ASNA1 homolog n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2RG80_9STRA7.070e-9548.44ATPase ASNA1 homolog n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig126contigH-akashiwo_Contig126:53089..54129 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr22896
PFAMsArsA_ATPase
Model size963
Max annot lvl2836|Bacillariophyta
KEGG koko:K01551
KEGG TC3.A.19.1,3.A.21.1,3.A.4.1
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.86e-84
EggNOG OGsCOG0003@1|root,KOG2825@2759|Eukaryota,2XE47@2836|Bacillariophyta
EC3.6.3.16
DescriptionATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting
Cds size771
COG categoryP
BRITEko00000,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387136.3130388-CDS-H-akashiwo_Contig126:53088..537161681387136.3130388-CDS-H-akashiwo_Contig126:53088..53716Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig126 53089..53716 -
1681387136.3265767-CDS-H-akashiwo_Contig126:53794..539371681387136.3265767-CDS-H-akashiwo_Contig126:53794..53937Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig126 53795..53937 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387136.336096-UTR-H-akashiwo_Contig126:53937..541291681387136.336096-UTR-H-akashiwo_Contig126:53937..54129Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig126 53938..54129 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig126.1.1prot_H-akashiwo_Contig126.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig126 53089..53937 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig126.1.1

>prot_H-akashiwo_Contig126.1.1 ID=prot_H-akashiwo_Contig126.1.1|Name=mRNA_H-akashiwo_Contig126.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=257bp
MHLVRSSGRILPLVNGFENLYCMEIEPTVEVDEMEGLDDEAAGPLKSIMD
FSCIVFDTAPTGHTLRLLSFPTIMDKALDKILALKSKFSGLFSQFAGMMG
GGGNSNPDALLEKFEQMRTVINQVNDQFKDPERTTFVCVLIPEFLSLYET
ERLVQELTKFEIDTHNIVVNQVLFPDKDIDTLTTWFDGEKASLSSEAQDI
ISKTMARKKMQDKYINQIFQLYEDFHVCLMPLLDHEVRGVERLRDFSAKL
IQSEDA*
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mRNA from alignment at H-akashiwo_Contig126:53089..54129-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig126.1.1 ID=mRNA_H-akashiwo_Contig126.1.1|Name=mRNA_H-akashiwo_Contig126.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1041bp|location=Sequence derived from alignment at H-akashiwo_Contig126:53089..54129- (Heterosigma akashiwo CCMP452)
ATGGCCGACGAAATGGAGCCTCTCGAGGGAACCCTCAAGAATATCCTTGA CCAGGAATCTCTCAAGTGGATCTTCGTTGGTGGCAAGGGTGGTGGGGTAA GACCACCACTTCCTGCACACTTGCAGTTCAGCTTGCTGGGGTGAGGAAAA TGTCCTGGTTGTGTCAACCGATCCCCGCCCACAACTTGAGTGATGCATTT GGTCAGAAGTTCGGGAAGGATCCTACCCCTGGTCAACGGATTTGAGAACC TTTACTGCATGGAGATTGAGCCAACTGTGGAGGTGGACGAGATGGAGGGG CTGGATGACGAGGCTGCCGGTCCTTTGAAGTCCATGTTTGCTGACCTTAC CAACTCCATTCCTGGTGTGGACGAGGCCATGTCTTTCTCCGAGCTCATGA AGCAGGTGCAGAGCATGGACTTCTCATGCATTGTGTTCGATACCGCCCCT ACTGGCCATACCCTCAGACTTCTTTCTTTCCCCACTATTATGGATAAAGC CCTTGACAAAATCCTGGCTCTTAAGAGCAAGTTCTCCGGTCTTTTCTCCC AGTTTGCTGGCATGATGGGTGGCGGCGGAAACTCCAACCCCGATGCTCTC CTCGAAAAGTTCGAGCAGATGCGGACGGTGATCAACCAGGTCAACGACCA GTTCAAGGACCCCGAAAGGACCACCTTCGTGTGCGTCCTCATCCCCGAGT TCCTTTCCCTTTATGAGACCGAGCGCCTGGTGCAGGAGCTCACCAAATTT GAGATTGACACACACAATATTGTTGTGAACCAGGTGCTGTTCCCTGACAA GGACATAGACACACTCACCACCTGGTTCGACGGCGAAAAGGCTAGCCTCT CCAGCGAGGCCCAGGACATCATCAGCAAGACCATGGCCCGCAAGAAGATG CAGGACAAGTACATCAACCAGATCTTCCAGCTGTACGAGGACTTCCACGT GTGCCTGATGCCGCTGCTGGACCACGAGGTGCGGGGGGTGGAGCGCCTGC GGGACTTCTCGGCGAAGCTCATCCAGTCCGAGGACGCGTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig126:53089..54129-

>mRNA_H-akashiwo_Contig126.1.1 ID=mRNA_H-akashiwo_Contig126.1.1|Name=mRNA_H-akashiwo_Contig126.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=771bp|location=Sequence derived from alignment at H-akashiwo_Contig126:53089..54129- (Heterosigma akashiwo CCMP452)
ATGCATTTGGTCAGAAGTTCGGGAAGGATCCTACCCCTGGTCAACGGATT
TGAGAACCTTTACTGCATGGAGATTGAGCCAACTGTGGAGGTGGACGAGA
TGGAGGGGCTGGATGACGAGGCTGCCGGTCCTTTGAAGTCCATCATGGAC
TTCTCATGCATTGTGTTCGATACCGCCCCTACTGGCCATACCCTCAGACT
TCTTTCTTTCCCCACTATTATGGATAAAGCCCTTGACAAAATCCTGGCTC
TTAAGAGCAAGTTCTCCGGTCTTTTCTCCCAGTTTGCTGGCATGATGGGT
GGCGGCGGAAACTCCAACCCCGATGCTCTCCTCGAAAAGTTCGAGCAGAT
GCGGACGGTGATCAACCAGGTCAACGACCAGTTCAAGGACCCCGAAAGGA
CCACCTTCGTGTGCGTCCTCATCCCCGAGTTCCTTTCCCTTTATGAGACC
GAGCGCCTGGTGCAGGAGCTCACCAAATTTGAGATTGACACACACAATAT
TGTTGTGAACCAGGTGCTGTTCCCTGACAAGGACATAGACACACTCACCA
CCTGGTTCGACGGCGAAAAGGCTAGCCTCTCCAGCGAGGCCCAGGACATC
ATCAGCAAGACCATGGCCCGCAAGAAGATGCAGGACAAGTACATCAACCA
GATCTTCCAGCTGTACGAGGACTTCCACGTGTGCCTGATGCCGCTGCTGG
ACCACGAGGTGCGGGGGGTGGAGCGCCTGCGGGACTTCTCGGCGAAGCTC
ATCCAGTCCGAGGACGCGTGA
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