mRNA_H-akashiwo_Contig1259.15.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A7S4DBJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBJ0_HETAK) HSP 1 Score: 96.7 bits (239), Expect = 9.610e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 2
Query: 32 LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF
Sbjct: 70 LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 124
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A8B7ZRV7_ACAPL (Sodium channel protein n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZRV7_ACAPL) HSP 1 Score: 53.1 bits (126), Expect = 1.610e-6 Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 2
Query: 50 PAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
P N+S LR FR+LR LKT+S IPGL++II+ALL S+ M+G ++ L FF
Sbjct: 220 PVGNLSGLRTFRVLRALKTISVIPGLKSIINALLRSLKMLGEVLLLTFF 268
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: UPI001885C0A6 (LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha A n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885C0A6) HSP 1 Score: 52.8 bits (125), Expect = 2.210e-6 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 2
Query: 59 NVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
NVSALR FR+LR LKT++ IPGL+TI+ AL+ SV MGN++ L F
Sbjct: 237 NVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKMGNVMVLTVF 282
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A1A6HIU8_NEOLE (Ion_trans domain-containing protein n=1 Tax=Neotoma lepida TaxID=56216 RepID=A0A1A6HIU8_NEOLE) HSP 1 Score: 50.8 bits (120), Expect = 2.770e-6 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 2
Query: 14 YTSNLRLVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
+T N+ V + NVSALR FR+LR LKT+S IPGL+TI+ AL+ SV + +++ L F
Sbjct: 22 WTKNVEYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVF 82
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A2C9MAI3_BIOGL (Sodium channel protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9MAI3_BIOGL) HSP 1 Score: 52.4 bits (124), Expect = 3.020e-6 Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 2
Query: 47 LPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
LP+VNV LR FR+LR LKT+S +PGL+T++SALL + M+ ++ L FF
Sbjct: 230 LPSVNVQGLRTFRVLRALKTVSIVPGLKTMVSALLRAFKMLFEVILLTFF 279
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A662YLW2_ACIRT (Sodium channel protein type 3 subunit alpha n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A662YLW2_ACIRT) HSP 1 Score: 52.0 bits (123), Expect = 4.100e-6 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 2
Query: 14 YTSNLRLVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
Y SN R V + NVSALR FR+LR LKT+S IPGL+TI+ AL+ SV + +++ L F
Sbjct: 115 YFSNPRYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVF 175
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A8C4BIM8_9TELE (Sodium channel protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4BIM8_9TELE) HSP 1 Score: 52.0 bits (123), Expect = 4.130e-6 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 2
Query: 32 LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
L EFV P NVSALR FR+LR LKT+S IPGL+TI++AL+ SV + +++ L F
Sbjct: 208 LTEFV-PMGNVSALRTFRVLRTLKTISVIPGLKTIVAALIQSVKKLADVMILTVF 261
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A8C4BIH6_9TELE (Sodium channel protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4BIH6_9TELE) HSP 1 Score: 52.0 bits (123), Expect = 4.130e-6 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 2
Query: 32 LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
L EFV P NVSALR FR+LR LKT+S IPGL+TI++AL+ SV + +++ L F
Sbjct: 208 LTEFV-PMGNVSALRTFRVLRTLKTISVIPGLKTIVAALIQSVKKLADVMILTVF 261
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A8C4BEU6_9TELE (Sodium channel protein n=3 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4BEU6_9TELE) HSP 1 Score: 52.0 bits (123), Expect = 4.130e-6 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 2
Query: 32 LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
L EFV P NVSALR FR+LR LKT+S IPGL+TI++AL+ SV + +++ L F
Sbjct: 208 LTEFV-PMGNVSALRTFRVLRTLKTISVIPGLKTIVAALIQSVKKLADVMILTVF 261
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Match: A0A8C4G1H1_9TELE (Sodium channel protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4G1H1_9TELE) HSP 1 Score: 52.0 bits (123), Expect = 4.130e-6 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 2
Query: 32 LVEFVLPAVNVSALRLFRILRPLKTLSKIPGLRTIISALLNSVAMMGNIVFLLFF 196
L EFV P NVSALR FR+LR LKT+S IPGL+TI++AL+ SV + +++ L F
Sbjct: 205 LTEFV-PMGNVSALRTFRVLRTLKTISVIPGLKTIVAALIQSVKKLADVMILTVF 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1259.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1259.15.1 >prot_H-akashiwo_Contig1259.15.1 ID=prot_H-akashiwo_Contig1259.15.1|Name=mRNA_H-akashiwo_Contig1259.15.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=66bp MYIYIHIKPQVGRVCLASCQCVCSPIVPYIEASQDPFQDSWPADHHQCASback to top mRNA from alignment at H-akashiwo_Contig1259:173591..174102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1259.15.1 ID=mRNA_H-akashiwo_Contig1259.15.1|Name=mRNA_H-akashiwo_Contig1259.15.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=512bp|location=Sequence derived from alignment at H-akashiwo_Contig1259:173591..174102- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1259:173591..174102- >mRNA_H-akashiwo_Contig1259.15.1 ID=mRNA_H-akashiwo_Contig1259.15.1|Name=mRNA_H-akashiwo_Contig1259.15.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=198bp|location=Sequence derived from alignment at H-akashiwo_Contig1259:173591..174102- (Heterosigma akashiwo CCMP452)back to top |