mRNA_H-akashiwo_Contig1255.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 349 bits (896), Expect = 1.720e-112 Identity = 175/231 (75.76%), Postives = 195/231 (84.42%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEHIPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLMMEI 693
LD +KSVGPDGVSPRVLK CA +L PL RLFQK+ +AA FP SWKVARVTPV+KK DA PKNYRP+SVLPTLATTFERVLM QL+S L EHIP QFGFL GT DVGVI ADQI+R+LE KDVRLVALDF+GAFDKVWWRGLL HLWAVGV+ +A +LF+SYLS R+LFVVANG+ S+RV I SGVPQGAIWSPLLF+LFVRNVP V+EA CLFYADDLTL+ I
Sbjct: 323 LDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVI 553
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 281 bits (718), Expect = 7.710e-88 Identity = 150/235 (63.83%), Postives = 175/235 (74.47%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEHIPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASD----RVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLMMEI 693
LD +KSVGPDGVSPRVLK CA +L PL RLFQK+ +AA FP SWKVARVTPVYKK DA PKNYRP+SVLPTLATTFERVLM QL+S L EHIP QFGFL GT DVGVI ADQI+R+LE KDVRLVALDF+GAFDKVWWRGLL HLWAVGV+ +A +LF+SYL + + GE +D + QI + PL FVRNV V++A CLFY +DLTL++++
Sbjct: 323 LDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPL----FVRNVRQRVRKALCLFYVNDLTLLLKV 551
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL) HSP 1 Score: 179 bits (454), Expect = 5.120e-48 Identity = 94/229 (41.05%), Postives = 136/229 (59.39%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEH--IPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTL 681
+D K+ GPD VSPR+LKHCA+EL PL +F R +P WK ARV PV+KK P NYRP+S+L + E+++ + L E+ + QFGF G T D+ +I + +LE D +VALD GAFD+VW GL++ L A G+QG L L + YL R+L VV NG+AS + I + VPQG++ P+L+N+++ ++ ++ L YADD +L
Sbjct: 377 VDVGKATGPDDVSPRLLKHCARELSAPLTTVFTSCLREKKWPSVWKEARVVPVHKKNSRSEPNNYRPISLLSVMGKLLEKIVAAAIYQHLSENHLLSDRQFGFRPGRSTADLLLIISKDWQDALEEGLDTLVVALDIAGAFDRVWHAGLVKKLCAKGIQGNLLALLEDYLQGRTLRVVINGQASQPLPIQASVPQGSVLGPILWNIYIDDLLRQIPTL--LAYADDCSL 603
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 167 bits (424), Expect = 6.290e-48 Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 1
Query: 376 KDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLMMEI 693
KDVRLV LDFKGA DKVWWRGLL HLWAVGV+ +A KL +SYLS R+LFVVANG++S + I SGVPQGAIWSPLLF+LF+RNVP V+EA CLFYADDLTL ++
Sbjct: 3 KDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDV 108
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A1X7SUM2_AMPQE (Reverse transcriptase domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SUM2_AMPQE) HSP 1 Score: 168 bits (426), Expect = 5.830e-45 Identity = 89/224 (39.73%), Postives = 131/224 (58.48%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEHIPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADD 672
LD +K+VG DG+SPR+L+ CA L PL LF A P WKV ++TP+YK GD NYRP+S+L T++ E+++ +S L E QFGFL G T ++ + +++E ++ LDF+ AFD V + LL+ LW++G+QG F SYL+ R V NG S + + SGVPQG++ PLLF +F+ ++P+ V A+ L +ADD
Sbjct: 418 LDPTKAVGIDGISPRLLRACATPLCVPLHHLFNLSLIQASLPSEWKVHKITPIYKSGDRSSVCNYRPISLLCTISKVLEKLIYNAVSEFLVEAFSSSQFGFLAGRSTLQQLLVFLADLHQNMENKVMTDVIYLDFQKAFDTVPHKVLLDKLWSIGIQGNLWNWFYSYLNSRLQTVSINGHLSSFLPVLSGVPQGSLLGPLLFLIFINDLPSYVHTAKLLLFADD 641
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 163 bits (413), Expect = 6.180e-45 Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 1
Query: 391 VALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLMMEI 693
VALDFKGAFDKVWWRGLL HLWAVGV+ +A KL +SYLS R+LFVVANG++S + I SGVPQGAIWSPLLF+LF+RNVP V+EA CLFYADDLTL ++
Sbjct: 1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDV 101
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA) HSP 1 Score: 169 bits (427), Expect = 1.460e-44 Identity = 94/234 (40.17%), Postives = 134/234 (57.26%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEHIPP------EQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLM 684
LD SK+ GPD + RVLKH A EL PLA+LFQ + P WKVA V PV+KK P NYRP+S+L ++ E ++ + +L++HI +QFGF G T D + + + ++ RL+ LD AFD+VW RGL+ L A+GV G LK F++YL+ R L +G+ S IN+GVPQG+I PLLF L++ ++ ++ L YADD ++M
Sbjct: 346 LDISKATGPDSIPARVLKHAAPELSRPLAKLFQLLLNKHHMPKQWKVAHVIPVHKKNSKHDPNNYRPISLLCIISKVMEAII----NKALWQHIDKNSLISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADRELKATISGKTSTARLINAGVPQGSILGPLLFILYIDDLTEKLTNTAML-YADDSSIM 574
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A7D9HJ13_PARCT (Reverse transcriptase domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HJ13_PARCT) HSP 1 Score: 156 bits (395), Expect = 5.950e-43 Identity = 86/230 (37.39%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYE--HIPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLM 684
+D +K+ G DG+ R++K C++ + L R +P WK A VTPVYKK D Y KNYRP+S+LP+++ E+++ +L L E + Q GF G T + +I +LE K+VR+V LDF AFDKVW +GLL L ++GV+ L F SYLS R V+ G+ S + + +GVPQ ++ PLLF +++ ++ + + + C YADD +L+
Sbjct: 57 VDITKASGHDGIGNRIIKLCSRGIAKTFTCLINTSLRIGEYPTEWKKANVTPVYKKDDHQYKKNYRPISLLPSISKIPEKIVFTRLYEFLLEIRFLNDFQSGFRPGDSTVNQLTYIVHKIYEALEMGKEVRMVFLDFSKAFDKVWHKGLLYKLKSLGVKDPLLSWFCSYLSDRKQRVIIEGQCSSWLSVEAGVPQVSVLGPLLFLIYINDISSNIV-SDCFLYADDTSLL 285
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A6S7GLT2_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GLT2_PARCT) HSP 1 Score: 155 bits (393), Expect = 2.950e-42 Identity = 87/231 (37.66%), Postives = 120/231 (51.95%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEHIPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEARCLFYADDLTLMMEI 693
LD +K+ GPD V R+LK A + L LF K P+ WK+A + PVYKKG+ Y +NYRP+S+L ++ ER + + LY+ I Q GF RG + + I L+ V V LD AFDKV + LL L G G L+ F+SYL+ R V A G S + + SGVPQG+I P+LF+L+V ++P V + +ADD L I
Sbjct: 69 LDVTKATGPDNVPARLLKETAPVISTSLCTLFNKSLSQGALPEDWKIANIIPVYKKGEKEYAENYRPISLLSIVSKVLERCVFYNIREQLYQVIKTSQHGFTRGKSCVTNLLEVLNYIGSILDVGGQVDAVYLDMSKAFDKVNHKHLLHKLRMAGFGGSLLQWFQSYLTNRHQRVTAQGSTSTTLPVTSGVPQGSILGPVLFSLYVNDLPDTVTSSHVAMFADDTKLFKNI 299
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Match: A0A8B6DA78_MYTGA (Reverse transcriptase domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DA78_MYTGA) HSP 1 Score: 154 bits (390), Expect = 4.200e-42 Identity = 82/198 (41.41%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDAIYPKNYRPVSVLPTLATTFERVLMLQLSSSLYEH--IPPEQFGFLRGMGTTDVGVISADQIARSLEPSKDVRLVALDFKGAFDKVWWRGLLEHLWAVGVQGRALKLFKSYLSCRSLFVVANGEASDRVQINSGVPQGAI 588
LD +K+ GPD +S R+LK+ A+EL PLA+LF K R AV+P++WK+ V PV+K D NYRP+S+L + + ER + + L +H I GF+ G T + + D R+L+ K++R+V D AFD+VW GL+ L ++G++G LK F SYLS R VV +G++SD +N+GVPQG+I
Sbjct: 133 LDVTKATGPDEISGRLLKYAARELSRPLAQLFNKSIREAVYPETWKLESVIPVFKSCDRELVSNYRPISLLSIIGKSMERCVFKHFFNFLTKHNIITCATSGFMPGDSTINQLLHITDLFGRALDAGKEIRVVFFDISRAFDRVWHEGLIYKLKSIGIRGNLLKWFMSYLSNRKQKVVISGQSSDTFGVNAGVPQGSI 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1255.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1255.6.1 >prot_H-akashiwo_Contig1255.6.1 ID=prot_H-akashiwo_Contig1255.6.1|Name=mRNA_H-akashiwo_Contig1255.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=232bp LDESKSVGPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVback to top mRNA from alignment at H-akashiwo_Contig1255:216469..217164- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1255.6.1 ID=mRNA_H-akashiwo_Contig1255.6.1|Name=mRNA_H-akashiwo_Contig1255.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=696bp|location=Sequence derived from alignment at H-akashiwo_Contig1255:216469..217164- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1255:216469..217164- >mRNA_H-akashiwo_Contig1255.6.1 ID=mRNA_H-akashiwo_Contig1255.6.1|Name=mRNA_H-akashiwo_Contig1255.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=696bp|location=Sequence derived from alignment at H-akashiwo_Contig1255:216469..217164- (Heterosigma akashiwo CCMP452)back to top |