mRNA_H-akashiwo_Contig1253.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A8K1FQJ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQJ6_PYTOL) HSP 1 Score: 127 bits (319), Expect = 2.960e-34 Identity = 74/150 (49.33%), Postives = 98/150 (65.33%), Query Frame = 1
Query: 13 YQSFLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEH--FLGRIH---HNFARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
Y+S+LI + V K NIK ++ +AS FG VFV K + L EH FL ++ A L++ AY +E+ Q I G+EIM+ A N+ PF +AFIMG+EG GM+ Q ++CD F+YI QYGGGTASLNV VA+SIIMQ FA+WA
Sbjct: 15 YKSYLIVNNVQKNKNIKNMLISASSFGISEVFVVGQKKFD-LDEHRVFLDKLRCPITRIASLKECRAYCQER-QIRIIGVEIMEGAQNILDAPFQGDTAFIMGNEGSGMNAAQVAICDGFVYIPQYGGGTASLNVTVAASIIMQSFALWA 162
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A1Y1HUT9_KLENI (SpoU_methylase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUT9_KLENI) HSP 1 Score: 128 bits (321), Expect = 8.060e-34 Identity = 71/152 (46.71%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 1 GLPSYQSFLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFLGR---IHHNFARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
G S +S+L+ H V+K NI TL + + FG V + Y+ H I H F +LEDA YLKE Q I G+EI++ A V PF ++AFI+G+EG G+S+KQ +CD F+YISQYG GTASLNV VA+SI++ FAVWA
Sbjct: 24 GTSSPKSYLLVHNVSKKHNIGTLSRSCTAFGVTQVCIVGQNAYNTFGSHGAAEYVDIRH-FWKLEDAAKYLKEDCQCDIVGVEIVEGALAVHKRPFKRNTAFILGNEGTGLSQKQIEICDYFVYISQYGPGTASLNVTVAASIVLHAFAVWA 174
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A0K9PY49_ZOSMR (RNA methyltransferase, TrmH family protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PY49_ZOSMR) HSP 1 Score: 125 bits (313), Expect = 8.050e-33 Identity = 66/148 (44.59%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 16 QSFLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFLGRIHH----NFARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
+S +I H V K N+ TL +A+ FG + + + ++ H G H +F L DA YLKE+ I G+EI D A ++E PF +AF++G+EG G+SEK+ +MCD F+YISQYGGGTASLNV VA+SI++ +F VWA
Sbjct: 9 ESLVIVHNVAKRHNVGTLARSATAFGVTEMILIGKRDFNSFGSH--GSTSHLRFRHFHSLSDARHYLKEERDCDICGVEIADGAVSIEKHPFRKSTAFLLGNEGSGLSEKEYAMCDFFVYISQYGGGTASLNVTVAASIVLHQFGVWA 154
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A7S1C439_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C439_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.380e-32 Identity = 70/146 (47.95%), Postives = 98/146 (67.12%), Query Frame = 1
Query: 22 FLITHGVTKAANIKTLIETASIFGCQ-VVFVGAPKIYSKLPEHFLGRIHHNF---ARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
+++ V+K NI L+ +AS FG ++ VG+PK +S H GR H NF A+LEDA A L+E+ ++ G+EIM A V PFT AF++G+EG G+S +QKS+CD F+YI+QYGGGTASLNV VA+SI++ F +WA
Sbjct: 58 YVLLSNVSKKQNIGNLVRSASAFGASGILVVGSPK-FSLFGSHGSGR-HINFEKHAKLEDAAASLRERG-VSVVGVEIMPGARPVHEHPFTGSCAFMLGNEGTGLSARQKSVCDAFVYIAQYGGGTASLNVTVAASIVLHHFGLWA 200
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A4RR86_OSTLU (SpoU_methylase domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RR86_OSTLU) HSP 1 Score: 121 bits (304), Expect = 1.190e-31 Identity = 66/153 (43.14%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 22 FLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFL-GRIH-HNFARLEDAVAYLKEQWQAT-IYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWAQQQKKKEE 471
+ + H V K NI T+ + FG + + + + ++ H G +H +F LE+A LK + T I G+EI+D+A +E PFT ++AFIMG+EGHGM+E QK++CD F+YI QYG GTASLNV+VA+SI+M FA WA +++ E
Sbjct: 2 YFLAHNVAKKHNIGTMARCCTAFGVKSLVLIGSRQFNTFGSHGADGHVHFEHFDSLEEAREKLKGERGCTQILGVEIVDDARAIESHPFTGNTAFIMGNEGHGMTEAQKAICDGFVYIPQYGPGTASLNVSVAASIVMHHFASWAGYEERSRE 154
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: G5A0Y2_PHYSP (SpoU_methylase domain-containing protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=G5A0Y2_PHYSP) HSP 1 Score: 119 bits (297), Expect = 2.960e-31 Identity = 70/146 (47.95%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 22 FLITHGVTKAANIKTLIETASIFGCQVVFV-GAPKIYSKLPEHFLGRIHHNFARL---EDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
FLI + V K NIK ++ +AS FG + VFV G K + E FL + RL +D A+ E+ I G+EIM +A ++ PF+ +AFIMG+EG GMS Q ++CD F+YI QYGGGTASLNV VA+SII+Q FA+WA
Sbjct: 4 FLILNNVQKNKNIKNMLVSASAFGVEEVFVVGQKKFDLQEQEPFLRSLSCRVTRLATLKDCRAHCTERG-IRIVGVEIMHDAKSIADQPFSGDTAFIMGNEGSGMSSAQVAICDDFVYIPQYGGGTASLNVTVAASIILQSFALWA 148
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A8J4BLB6_9CHLO (SpoU_methylase domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BLB6_9CHLO) HSP 1 Score: 120 bits (300), Expect = 6.980e-31 Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 1 GLPSYQSFLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFLGRIHH----NFARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWAQQQKKKEE 471
G P F+ITH V+K NI T++ +A+ FG + V + + ++ H G H +F L+ V +LK + + GIEI + A V+ PFT +AF++G+EG G+SE+Q ++CD F+YI Q+G GTASLNVAVA+SI++ FAVWA +++ E
Sbjct: 15 GNPCPPCFIITHSVSKRHNIGTILRSATAFGVKEVCLVGSRQFNTFGSH--GSDAHVALKHFHTLQHCVQHLKNVERCRVLGIEICEGALPVQDHPFTGPTAFLLGNEGQGLSERQMALCDGFLYIPQHGAGTASLNVAVAASIVLHHFAVWAGYPERERE 173
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A6I9QSD9_ELAGV (uncharacterized protein LOC105039776 isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QSD9_ELAGV) HSP 1 Score: 119 bits (299), Expect = 1.150e-30 Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 16 QSFLITHGVTKAANIKTLIETASIFGC-QVVFVGAPKIYSKLPEHFLGRIHH----NFARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
+S ++ H V K N+ TL +A+ FG +++FVG + ++ H G H +F L A YLKE+ I G+EI + A +V H PF +AF++G+EG G+SEK+ +CD F+YI QYGGGTASLNV VA+SI++ F VWA
Sbjct: 10 ESLVVVHNVAKRHNVGTLARSATAFGVSEIIFVGR-RDFNAFGSH--GSTSHLRFRHFLSLSQAHLYLKEERDCDICGVEITEGAISVTHHPFKKSTAFLLGNEGTGLSEKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWA 155
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A0A8J4FB88_9CHLO (SpoU_methylase domain-containing protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FB88_9CHLO) HSP 1 Score: 119 bits (299), Expect = 1.400e-30 Identity = 64/154 (41.56%), Postives = 98/154 (63.64%), Query Frame = 1
Query: 22 FLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFLGRIHH----NFARLEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWAQQQKKKEE 471
F+ITH V+K NI T++ +A+ FG + V + + ++ H G H +F L+ V +LK+ + GIEI + A V+ PFT +AF++G+EG G+SE+Q ++CD F+YI Q+G GTASLNVAVA+SI++ FAVWA +++ E
Sbjct: 24 FIITHSVSKRHNIGTILRSATAFGVKEVCLVGSRQFNTFGSH--GSDAHVALKHFHTLQQCVQHLKDVEGCRVLGIEICEGALPVQEHPFTGATAFLLGNEGQGLSERQMALCDGFVYIPQHGAGTASLNVAVAASIVLHHFAVWAAYPERERE 175
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Match: A9NYY5_PICSI (SpoU_methylase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NYY5_PICSI) HSP 1 Score: 119 bits (299), Expect = 1.400e-30 Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 1
Query: 16 QSFLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFLGRIHHNFAR---LEDAVAYLKEQWQATIYGIEIMDEADNVEHLPFTSHSAFIMGSEGHGMSEKQKSMCDRFIYISQYGGGTASLNVAVASSIIMQRFAVWA 447
+SF+I H V K NI TL+ TA+ FG V + K ++ H +H NF L+ A YLK++ + I G+EI D A V PF +AF++G+EG G+S K+ +CD F+YISQYG GTASLNV VA+SI++ FAVWA
Sbjct: 2 ESFVIVHNVAKRHNIGTLVRTATAFGVSEVILVGRKDFNAFGSHG-STLHLNFRHFYTLQQAHQYLKDK-DSDICGVEIADGAIAVHEHPFKKSTAFLLGNEGTGLSSKEMEICDYFVYISQYGCGTASLNVTVAASIVLHHFAVWA 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1253.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1253.2.1 >prot_H-akashiwo_Contig1253.2.1 ID=prot_H-akashiwo_Contig1253.2.1|Name=mRNA_H-akashiwo_Contig1253.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=160bp GLPSYQSFLITHGVTKAANIKTLIETASIFGCQVVFVGAPKIYSKLPEHFback to top mRNA from alignment at H-akashiwo_Contig1253:97906..98385- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1253.2.1 ID=mRNA_H-akashiwo_Contig1253.2.1|Name=mRNA_H-akashiwo_Contig1253.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=480bp|location=Sequence derived from alignment at H-akashiwo_Contig1253:97906..98385- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1253:97906..98385- >mRNA_H-akashiwo_Contig1253.2.1 ID=mRNA_H-akashiwo_Contig1253.2.1|Name=mRNA_H-akashiwo_Contig1253.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=480bp|location=Sequence derived from alignment at H-akashiwo_Contig1253:97906..98385- (Heterosigma akashiwo CCMP452)back to top |