mRNA_H-akashiwo_Contig1251.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1251.5.1
Unique NamemRNA_H-akashiwo_Contig1251.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S3XLC0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC0_HETAK)

HSP 1 Score: 551 bits (1419), Expect = 1.000e-197
Identity = 277/283 (97.88%), Postives = 277/283 (97.88%), Query Frame = 1
Query:    1 RSLVLDWHWQLRLEGFPIII-MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFPCM 846
            RSLVLDWHWQLRLEGFPIII MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ    P M
Sbjct:    9 RSLVLDWHWQLRLEGFPIIIIMSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMM 291          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S1ZBJ0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ0_TRICV)

HSP 1 Score: 379 bits (972), Expect = 4.240e-130
Identity = 185/260 (71.15%), Postives = 211/260 (81.15%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFP 840
            MSTKLNE ENATVG  VG +EV+CLQ FNYAKNM+QQG P+S DPRK+YRGVGAN VNMGSCTMIQFAVGG+ KK + G D  R+L  +E+MG GI AGVVSALVGSPLELIMIQQQRKG S   T+ +I+ P   +RG+ GAAVREGLWTCGYLSIPPIVR +L  N+P+TFDS  KARVPA+LLGGLFACYLTHPFDTVKTCMQGDIER  F  F +++K + KE G  AFYRGATFRYGRM  AV +MD+LQ +  P
Sbjct:    1 MSTKLNEFENATVGASVGTVEVLCLQSFNYAKNMIQQGQPISLDPRKMYRGVGANCVNMGSCTMIQFAVGGSLKKMVTGGDAKRQLKPHEEMGCGIVAGVVSALVGSPLELIMIQQQRKGGSTLETLKNISTPGTFMRGFVGAAVREGLWTCGYLSIPPIVRRTLMENYPETFDSQQKARVPAALLGGLFACYLTHPFDTVKTCMQGDIERKTFGSFTETSKALYKESGFPAFYRGATFRYGRMVCAVALMDYLQAMIGP 260          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S3QJ82_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ82_9STRA)

HSP 1 Score: 377 bits (967), Expect = 2.360e-129
Identity = 185/255 (72.55%), Postives = 207/255 (81.18%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ 825
            MS  LNE ENATVGM VGCIEV+CLQP NYAKNMVQQG P+S +P+ +YRGVGAN VNMGSCTM+QFA GG  KK++ G D  RKL  +E+MG GI AGV+SA + +PLELIMIQQQ KG    +T+ SIANP+NI RG+ GAAVREGLWTCGYLSIPPIVR +L  NFP+TFDS AKAR+PA+LLGGLFACYLT PFDT+KTCMQGDIER KF  F  SA  V  E G T FYRGATFRYGRM IAVGMMDFLQ
Sbjct:    1 MSANLNEFENATVGMTVGCIEVLCLQPLNYAKNMVQQGNPISTNPKVMYRGVGANCVNMGSCTMLQFAAGGFLKKSITGGDSTRKLKAHEEMGCGIIAGVLSATLATPLELIMIQQQMKGGGTLSTLKSIANPTNIGRGFIGAAVREGLWTCGYLSIPPIVRSNLMENFPETFDSQAKARIPAALLGGLFACYLTQPFDTIKTCMQGDIEREKFKGFRHSASVVYGESGFTGFYRGATFRYGRMVIAVGMMDFLQ 255          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S4T3Z5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T3Z5_9STRA)

HSP 1 Score: 375 bits (962), Expect = 1.360e-128
Identity = 186/256 (72.66%), Postives = 208/256 (81.25%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQV 828
            MSTKLNE +NATVGMV G IEV CLQP NYAKNMVQQG PL+ DP+KLYRGVGAN+VNMGSCTMIQF+ GGA KK + GD   R+L  +E+M  GI AG +SA VGSPLELIMIQQQRKG +   TI +IA+PS   RG+ GAAVRE LWTCGYLSIPPIVR +L   +P+TFDSD KARVPA+LLGGLFACYLTHPFDT+KTCMQGDIER  F    D+AK + KEG   AFYRGATFRYGRM IAVGM+DFLQV
Sbjct:    1 MSTKLNEFQNATVGMVCGVIEVFCLQPLNYAKNMVQQGQPLTLDPKKLYRGVGANMVNMGSCTMIQFSTGGALKKLVIGDGEARRLKAWEEMACGIGAGTISATVGSPLELIMIQQQRKGGNTIQTIKNIASPSIATRGFVGAAVREALWTCGYLSIPPIVRTTLREQYPETFDSDQKARVPAALLGGLFACYLTHPFDTIKTCMQGDIERKTFGTLTDTAKILFKEGSIPAFYRGATFRYGRMVIAVGMLDFLQV 256          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: K3W4I5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K3W4I5_THAOC)

HSP 1 Score: 366 bits (940), Expect = 3.990e-125
Identity = 182/247 (73.68%), Postives = 205/247 (83.00%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIA 801
            MSTKLNE +NATVGM+VG IEV+CLQPFNYAKNM QQG P+S DPRK+YRGVGAN VNMGSCTMIQF+VGG  KKA+   + NR+L ++E+MG GI AGV+SAL  +PLELIMIQQQRKG     TI +IA P NI+RG+TGAAVREGLWTCGYLSIPPIVR SL  NFPD FDSD KARVPA+LLGGLFACYLT PFDT+KTCMQGDIER  +  F+D+AK +  E G TAFYRGATFRYGRM  A
Sbjct:    1 MSTKLNETQNATVGMMVGVIEVLCLQPFNYAKNMTQQGQPISLDPRKMYRGVGANCVNMGSCTMIQFSVGGTFKKAVLAGE-NRQLKMHEEMGTGIGAGVISALAATPLELIMIQQQRKGGGTLGTIKNIATPDNIMRGFTGAAVREGLWTCGYLSIPPIVRRSLRENFPDKFDSDTKARVPAALLGGLFACYLTQPFDTIKTCMQGDIERKTYGSFLDTAKKLHAESGLTAFYRGATFRYGRMVCA 246          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: B8CG34_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG34_THAPS)

HSP 1 Score: 364 bits (934), Expect = 1.680e-124
Identity = 186/257 (72.37%), Postives = 209/257 (81.32%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKK-ALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQV 828
            MSTKLNEL+NATVGM VG IEV+CLQPFNY KN +QQG PL+ADPRKLYRGV AN VNMG CTMIQFAVGG+ KK  L G+D  R L +YE+MG GI AGV+SA VGSPLELIMIQQQRKG     T  +IA P+N LRG+ GAAVREGLWTCGYLSIPPIVR +L   +PD FD+D KAR+PA+LLGGLFACYLT PFDTVKTCMQGDIER  F  F ++A+ + ++G  TAFYRGATFRYGRM  AV MMDFLQV
Sbjct:    1 MSTKLNELQNATVGMTVGVIEVLCLQPFNYCKNALQQGQPLTADPRKLYRGVSANAVNMGCCTMIQFAVGGSFKKLVLAGED--RTLKMYEEMGTGIAAGVISAFVGSPLELIMIQQQRKGGGAVETFKTIATPNNFLRGWVGAAVREGLWTCGYLSIPPIVRRNLREMYPDKFDTDNKARIPAALLGGLFACYLTQPFDTVKTCMQGDIERKTFGTFTETARRIGQDGF-TAFYRGATFRYGRMVCAVFMMDFLQV 254          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S4HPD5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPD5_9STRA)

HSP 1 Score: 364 bits (934), Expect = 2.550e-124
Identity = 180/260 (69.23%), Postives = 209/260 (80.38%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFP 840
            MSTKLNE+ENA+VG  VG IEV+CLQ  NY KNM+QQG P+S DPRK+YRGVGAN VNMGSCTMIQFAVGG+ K  + G+ P R+L  +E+M  GI AGV+SALVGSPLELIMIQQQRKG +   T+ SIA+P+ ++RG+ GAAVREGLWTCGYLSIPPIVR +L   +P+TFD++AKARVPASLLGGLFACYLT P DTVKTCMQGDIER  F  F ++AK + KE G   FYRGATFRYGRM  AV MMD LQ +  P
Sbjct:    1 MSTKLNEVENASVGAAVGTIEVLCLQSLNYCKNMMQQGQPISLDPRKMYRGVGANCVNMGSCTMIQFAVGGSLKNMVLGEQPTRQLKAHEEMLCGISAGVISALVGSPLELIMIQQQRKGGNTLETMKSIASPNTVMRGFAGAAVREGLWTCGYLSIPPIVRRNLMEMYPETFDTEAKARVPASLLGGLFACYLTQPADTVKTCMQGDIERKTFGSFTETAKVLYKESGIPGFYRGATFRYGRMVCAVFMMDTLQAMIGP 260          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S2LBN4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBN4_9STRA)

HSP 1 Score: 363 bits (931), Expect = 6.810e-124
Identity = 186/260 (71.54%), Postives = 205/260 (78.85%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFP 840
            MS  LNEL+NATVGM VG IEV+CLQPFNY KNM+QQG PLSADPR LYRGV AN VNMGSCTMIQFAVGG+ KK + G++  R L ++E+MG GI AGV SALVGSPLELIMIQQQR G     T  SIANP+N  RG+ GAAVREGLWTCGYLSIPPIVR +L   +PD FD+D KARVPA+LLGGLFACYLT PFDTVKTCMQGDIER  F  F  +AK +  E G TAFYRGATFRYGRM  AV MMD+LQ    P
Sbjct:    1 MSANLNELQNATVGMTVGVIEVLCLQPFNYCKNMMQQGQPLSADPRVLYRGVMANAVNMGSCTMIQFAVGGSLKKLVSGEE-QRTLKMHEEMGTGIVAGVTSALVGSPLELIMIQQQRTGKGSLETFKSIANPNNFFRGFLGAAVREGLWTCGYLSIPPIVRRNLREMYPDKFDTDNKARVPAALLGGLFACYLTQPFDTVKTCMQGDIERKTFGTFTQTAKKI-SEDGFTAFYRGATFRYGRMVCAVFMMDYLQAAVGP 258          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A6U5F8K7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F8K7_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.290e-120
Identity = 173/255 (67.84%), Postives = 197/255 (77.25%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ 825
            MS+KLNE +NATVGM VGC+EV+CLQP NY KNM+QQG PLSADPRKLYRGVGAN +NMGSCTMIQFA GG+ KK++ G D  R L   E++  G+  G++SA VGSPLELIMIQQQRKG +   T+  +A PS I RG  G AVREGLWT GYLSIPPI+R  L T +P+ FDS  KARVPA+LLGGLF CYLTHPFDTVKTCMQGDIERT +  F D+AK +  E     FYRGATFRYGRM  AV MMD LQ
Sbjct:    1 MSSKLNEFQNATVGMAVGCVEVLCLQPLNYCKNMIQQGQPLSADPRKLYRGVGANCINMGSCTMIQFAAGGSLKKSVLGSDQTRNLTPSEEVACGLGGGILSASVGSPLELIMIQQQRKGKNTINTLKDVAVPSVITRGLLGTAVREGLWTVGYLSIPPIIRRELMTRYPERFDSVNKARVPAALLGGLFGCYLTHPFDTVKTCMQGDIERTTYGTFTDTAKKIYTESSIAGFYRGATFRYGRMVCAVFMMDVLQ 255          
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S3L885_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L885_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.760e-114
Identity = 168/256 (65.62%), Postives = 199/256 (77.73%), Query Frame = 1
Query:   61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIA-NPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ 825
            MS++LNE +NATVGM VG IEV+ LQPFNYAKNM QQ  P+S +P  +YRGV AN VNMGSCTMIQFAVGG  K+ +   + +R L++YE+M AGI AG VS LVGSPLELIMIQQQRKGL L TTIG I  NP+NI+RG+ G AVRE LWTCGYLSIPP+VR +L  ++P+TF  + +AR+PA+LLGGLFACY+THPFDTVKTCMQGDIER  +  F  +A  +  E     FYRGATFRYGRM  AV MMD L+
Sbjct:    1 MSSQLNEFQNATVGMTVGVIEVLTLQPFNYAKNMTQQKQPISLNPLIMYRGVHANAVNMGSCTMIQFAVGGRLKQTILNGE-SRHLSLYEEMAAGICAGTVSGLVGSPLELIMIQQQRKGLPLGTTIGDITKNPANIMRGFVGCAVREALWTCGYLSIPPVVRRTLMESYPETFPDNNRARIPAALLGGLFACYMTHPFDTVKTCMQGDIERNTYGTFTQTASKIFAESNIPGFYRGATFRYGRMVCAVFMMDLLK 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XLC0_HETAK1.000e-19797.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1ZBJ0_TRICV4.240e-13071.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3QJ82_9STRA2.360e-12972.55Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4T3Z5_9STRA1.360e-12872.66Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
K3W4I5_THAOC3.990e-12573.68Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8CG34_THAPS1.680e-12472.37Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4HPD5_9STRA2.550e-12469.23Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2LBN4_9STRA6.810e-12471.54Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6U5F8K7_9STRA2.290e-12067.84Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3L885_9STRA2.760e-11465.63Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1251contigH-akashiwo_Contig1251:68260..69105 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K3W4I5
PFAMsMito_carr
Model size846
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.54e-126
EggNOG OGsKOG0758@1|root,KOG0758@2759|Eukaryota,2XAVA@2836|Bacillariophyta
DescriptionBelongs to the mitochondrial carrier (TC 2.A.29) family
Cds size846
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387133.7556388-CDS-H-akashiwo_Contig1251:68259..691051681387133.7556388-CDS-H-akashiwo_Contig1251:68259..69105Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1251 68260..69105 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1251.5.1prot_H-akashiwo_Contig1251.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1251 68260..69105 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1251.5.1

>prot_H-akashiwo_Contig1251.5.1 ID=prot_H-akashiwo_Contig1251.5.1|Name=mRNA_H-akashiwo_Contig1251.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=282bp
RSLVLDWHWQLRLEGFPIIIMSTKLNELENATVGMVVGCIEVICLQPFNY
AKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGD
DPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSI
ANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKAR
VPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGP
TAFYRGATFRYGRMCIAVGMMDFLQVLYFPCM
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mRNA from alignment at H-akashiwo_Contig1251:68260..69105+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1251.5.1 ID=mRNA_H-akashiwo_Contig1251.5.1|Name=mRNA_H-akashiwo_Contig1251.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=846bp|location=Sequence derived from alignment at H-akashiwo_Contig1251:68260..69105+ (Heterosigma akashiwo CCMP452)
CGATCATTGGTATTGGATTGGCATTGGCAGTTGAGGTTGGAAGGGTTTCC CATCATCATCATGTCGACCAAGTTGAATGAGTTGGAAAATGCCACGGTGG GGATGGTGGTTGGCTGCATTGAGGTCATATGCCTCCAGCCTTTCAACTAT GCCAAAAACATGGTGCAGCAGGGCCTTCCCCTTTCAGCTGATCCCAGAAA GCTCTACAGAGGTGTTGGGGCCAACGTTGTTAACATGGGTTCATGCACGA TGATTCAGTTCGCTGTTGGTGGTGCTGCTAAAAAAGCTCTTCAAGGAGAC GATCCCAACCGGAAGCTGGCAATCTATGAGCAAATGGGTGCAGGCATATT CGCTGGAGTAGTTTCTGCACTTGTCGGGAGCCCCCTCGAGCTCATCATGA TCCAGCAGCAGCGCAAGGGCCTTAGCCTTGCCACTACAATTGGAAGCATT GCAAATCCTTCCAATATCTTACGGGGCTACACCGGCGCTGCTGTTAGAGA GGGGCTGTGGACTTGTGGCTACCTCAGCATTCCCCCCATTGTTCGAGAAT CACTGACCACCAACTTCCCAGACACTTTTGACTCAGATGCCAAGGCCCGT GTTCCTGCTTCCCTCCTGGGCGGGCTTTTTGCTTGCTACTTGACACATCC TTTTGACACAGTCAAGACTTGCATGCAAGGTGATATTGAACGGACAAAGT TCACCAGATTTGTTGATTCAGCCAAAACTGTGCTCAAAGAAGGCGGCCCT ACAGCATTCTATCGCGGAGCTACCTTTCGGTACGGGAGAATGTGTATTGC TGTTGGTATGATGGACTTCCTCCAGGTATTATATTTTCCATGCATG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1251:68260..69105+

>mRNA_H-akashiwo_Contig1251.5.1 ID=mRNA_H-akashiwo_Contig1251.5.1|Name=mRNA_H-akashiwo_Contig1251.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=846bp|location=Sequence derived from alignment at H-akashiwo_Contig1251:68260..69105+ (Heterosigma akashiwo CCMP452)
CGATCATTGGTATTGGATTGGCATTGGCAGTTGAGGTTGGAAGGGTTTCC
CATCATCATCATGTCGACCAAGTTGAATGAGTTGGAAAATGCCACGGTGG
GGATGGTGGTTGGCTGCATTGAGGTCATATGCCTCCAGCCTTTCAACTAT
GCCAAAAACATGGTGCAGCAGGGCCTTCCCCTTTCAGCTGATCCCAGAAA
GCTCTACAGAGGTGTTGGGGCCAACGTTGTTAACATGGGTTCATGCACGA
TGATTCAGTTCGCTGTTGGTGGTGCTGCTAAAAAAGCTCTTCAAGGAGAC
GATCCCAACCGGAAGCTGGCAATCTATGAGCAAATGGGTGCAGGCATATT
CGCTGGAGTAGTTTCTGCACTTGTCGGGAGCCCCCTCGAGCTCATCATGA
TCCAGCAGCAGCGCAAGGGCCTTAGCCTTGCCACTACAATTGGAAGCATT
GCAAATCCTTCCAATATCTTACGGGGCTACACCGGCGCTGCTGTTAGAGA
GGGGCTGTGGACTTGTGGCTACCTCAGCATTCCCCCCATTGTTCGAGAAT
CACTGACCACCAACTTCCCAGACACTTTTGACTCAGATGCCAAGGCCCGT
GTTCCTGCTTCCCTCCTGGGCGGGCTTTTTGCTTGCTACTTGACACATCC
TTTTGACACAGTCAAGACTTGCATGCAAGGTGATATTGAACGGACAAAGT
TCACCAGATTTGTTGATTCAGCCAAAACTGTGCTCAAAGAAGGCGGCCCT
ACAGCATTCTATCGCGGAGCTACCTTTCGGTACGGGAGAATGTGTATTGC
TGTTGGTATGATGGACTTCCTCCAGGTATTATATTTTCCATGCATG
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