mRNA_H-akashiwo_Contig1251.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S3XLC0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC0_HETAK) HSP 1 Score: 551 bits (1419), Expect = 1.000e-197 Identity = 277/283 (97.88%), Postives = 277/283 (97.88%), Query Frame = 1
Query: 1 RSLVLDWHWQLRLEGFPIII-MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFPCM 846
RSLVLDWHWQLRLEGFPIII MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ P M
Sbjct: 9 RSLVLDWHWQLRLEGFPIIIIMSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMM 291
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S1ZBJ0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ0_TRICV) HSP 1 Score: 379 bits (972), Expect = 4.240e-130 Identity = 185/260 (71.15%), Postives = 211/260 (81.15%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFP 840
MSTKLNE ENATVG VG +EV+CLQ FNYAKNM+QQG P+S DPRK+YRGVGAN VNMGSCTMIQFAVGG+ KK + G D R+L +E+MG GI AGVVSALVGSPLELIMIQQQRKG S T+ +I+ P +RG+ GAAVREGLWTCGYLSIPPIVR +L N+P+TFDS KARVPA+LLGGLFACYLTHPFDTVKTCMQGDIER F F +++K + KE G AFYRGATFRYGRM AV +MD+LQ + P
Sbjct: 1 MSTKLNEFENATVGASVGTVEVLCLQSFNYAKNMIQQGQPISLDPRKMYRGVGANCVNMGSCTMIQFAVGGSLKKMVTGGDAKRQLKPHEEMGCGIVAGVVSALVGSPLELIMIQQQRKGGSTLETLKNISTPGTFMRGFVGAAVREGLWTCGYLSIPPIVRRTLMENYPETFDSQQKARVPAALLGGLFACYLTHPFDTVKTCMQGDIERKTFGSFTETSKALYKESGFPAFYRGATFRYGRMVCAVALMDYLQAMIGP 260
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S3QJ82_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ82_9STRA) HSP 1 Score: 377 bits (967), Expect = 2.360e-129 Identity = 185/255 (72.55%), Postives = 207/255 (81.18%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ 825
MS LNE ENATVGM VGCIEV+CLQP NYAKNMVQQG P+S +P+ +YRGVGAN VNMGSCTM+QFA GG KK++ G D RKL +E+MG GI AGV+SA + +PLELIMIQQQ KG +T+ SIANP+NI RG+ GAAVREGLWTCGYLSIPPIVR +L NFP+TFDS AKAR+PA+LLGGLFACYLT PFDT+KTCMQGDIER KF F SA V E G T FYRGATFRYGRM IAVGMMDFLQ
Sbjct: 1 MSANLNEFENATVGMTVGCIEVLCLQPLNYAKNMVQQGNPISTNPKVMYRGVGANCVNMGSCTMLQFAAGGFLKKSITGGDSTRKLKAHEEMGCGIIAGVLSATLATPLELIMIQQQMKGGGTLSTLKSIANPTNIGRGFIGAAVREGLWTCGYLSIPPIVRSNLMENFPETFDSQAKARIPAALLGGLFACYLTQPFDTIKTCMQGDIEREKFKGFRHSASVVYGESGFTGFYRGATFRYGRMVIAVGMMDFLQ 255
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S4T3Z5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T3Z5_9STRA) HSP 1 Score: 375 bits (962), Expect = 1.360e-128 Identity = 186/256 (72.66%), Postives = 208/256 (81.25%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQV 828
MSTKLNE +NATVGMV G IEV CLQP NYAKNMVQQG PL+ DP+KLYRGVGAN+VNMGSCTMIQF+ GGA KK + GD R+L +E+M GI AG +SA VGSPLELIMIQQQRKG + TI +IA+PS RG+ GAAVRE LWTCGYLSIPPIVR +L +P+TFDSD KARVPA+LLGGLFACYLTHPFDT+KTCMQGDIER F D+AK + KEG AFYRGATFRYGRM IAVGM+DFLQV
Sbjct: 1 MSTKLNEFQNATVGMVCGVIEVFCLQPLNYAKNMVQQGQPLTLDPKKLYRGVGANMVNMGSCTMIQFSTGGALKKLVIGDGEARRLKAWEEMACGIGAGTISATVGSPLELIMIQQQRKGGNTIQTIKNIASPSIATRGFVGAAVREALWTCGYLSIPPIVRTTLREQYPETFDSDQKARVPAALLGGLFACYLTHPFDTIKTCMQGDIERKTFGTLTDTAKILFKEGSIPAFYRGATFRYGRMVIAVGMLDFLQV 256
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: K3W4I5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K3W4I5_THAOC) HSP 1 Score: 366 bits (940), Expect = 3.990e-125 Identity = 182/247 (73.68%), Postives = 205/247 (83.00%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIA 801
MSTKLNE +NATVGM+VG IEV+CLQPFNYAKNM QQG P+S DPRK+YRGVGAN VNMGSCTMIQF+VGG KKA+ + NR+L ++E+MG GI AGV+SAL +PLELIMIQQQRKG TI +IA P NI+RG+TGAAVREGLWTCGYLSIPPIVR SL NFPD FDSD KARVPA+LLGGLFACYLT PFDT+KTCMQGDIER + F+D+AK + E G TAFYRGATFRYGRM A
Sbjct: 1 MSTKLNETQNATVGMMVGVIEVLCLQPFNYAKNMTQQGQPISLDPRKMYRGVGANCVNMGSCTMIQFSVGGTFKKAVLAGE-NRQLKMHEEMGTGIGAGVISALAATPLELIMIQQQRKGGGTLGTIKNIATPDNIMRGFTGAAVREGLWTCGYLSIPPIVRRSLRENFPDKFDSDTKARVPAALLGGLFACYLTQPFDTIKTCMQGDIERKTYGSFLDTAKKLHAESGLTAFYRGATFRYGRMVCA 246
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: B8CG34_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG34_THAPS) HSP 1 Score: 364 bits (934), Expect = 1.680e-124 Identity = 186/257 (72.37%), Postives = 209/257 (81.32%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKK-ALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQV 828
MSTKLNEL+NATVGM VG IEV+CLQPFNY KN +QQG PL+ADPRKLYRGV AN VNMG CTMIQFAVGG+ KK L G+D R L +YE+MG GI AGV+SA VGSPLELIMIQQQRKG T +IA P+N LRG+ GAAVREGLWTCGYLSIPPIVR +L +PD FD+D KAR+PA+LLGGLFACYLT PFDTVKTCMQGDIER F F ++A+ + ++G TAFYRGATFRYGRM AV MMDFLQV
Sbjct: 1 MSTKLNELQNATVGMTVGVIEVLCLQPFNYCKNALQQGQPLTADPRKLYRGVSANAVNMGCCTMIQFAVGGSFKKLVLAGED--RTLKMYEEMGTGIAAGVISAFVGSPLELIMIQQQRKGGGAVETFKTIATPNNFLRGWVGAAVREGLWTCGYLSIPPIVRRNLREMYPDKFDTDNKARIPAALLGGLFACYLTQPFDTVKTCMQGDIERKTFGTFTETARRIGQDGF-TAFYRGATFRYGRMVCAVFMMDFLQV 254
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S4HPD5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPD5_9STRA) HSP 1 Score: 364 bits (934), Expect = 2.550e-124 Identity = 180/260 (69.23%), Postives = 209/260 (80.38%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFP 840
MSTKLNE+ENA+VG VG IEV+CLQ NY KNM+QQG P+S DPRK+YRGVGAN VNMGSCTMIQFAVGG+ K + G+ P R+L +E+M GI AGV+SALVGSPLELIMIQQQRKG + T+ SIA+P+ ++RG+ GAAVREGLWTCGYLSIPPIVR +L +P+TFD++AKARVPASLLGGLFACYLT P DTVKTCMQGDIER F F ++AK + KE G FYRGATFRYGRM AV MMD LQ + P
Sbjct: 1 MSTKLNEVENASVGAAVGTIEVLCLQSLNYCKNMMQQGQPISLDPRKMYRGVGANCVNMGSCTMIQFAVGGSLKNMVLGEQPTRQLKAHEEMLCGISAGVISALVGSPLELIMIQQQRKGGNTLETMKSIASPNTVMRGFAGAAVREGLWTCGYLSIPPIVRRNLMEMYPETFDTEAKARVPASLLGGLFACYLTQPADTVKTCMQGDIERKTFGSFTETAKVLYKESGIPGFYRGATFRYGRMVCAVFMMDTLQAMIGP 260
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S2LBN4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBN4_9STRA) HSP 1 Score: 363 bits (931), Expect = 6.810e-124 Identity = 186/260 (71.54%), Postives = 205/260 (78.85%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQVLYFP 840
MS LNEL+NATVGM VG IEV+CLQPFNY KNM+QQG PLSADPR LYRGV AN VNMGSCTMIQFAVGG+ KK + G++ R L ++E+MG GI AGV SALVGSPLELIMIQQQR G T SIANP+N RG+ GAAVREGLWTCGYLSIPPIVR +L +PD FD+D KARVPA+LLGGLFACYLT PFDTVKTCMQGDIER F F +AK + E G TAFYRGATFRYGRM AV MMD+LQ P
Sbjct: 1 MSANLNELQNATVGMTVGVIEVLCLQPFNYCKNMMQQGQPLSADPRVLYRGVMANAVNMGSCTMIQFAVGGSLKKLVSGEE-QRTLKMHEEMGTGIVAGVTSALVGSPLELIMIQQQRTGKGSLETFKSIANPNNFFRGFLGAAVREGLWTCGYLSIPPIVRRNLREMYPDKFDTDNKARVPAALLGGLFACYLTQPFDTVKTCMQGDIERKTFGTFTQTAKKI-SEDGFTAFYRGATFRYGRMVCAVFMMDYLQAAVGP 258
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A6U5F8K7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F8K7_9STRA) HSP 1 Score: 354 bits (908), Expect = 2.290e-120 Identity = 173/255 (67.84%), Postives = 197/255 (77.25%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIANPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ 825
MS+KLNE +NATVGM VGC+EV+CLQP NY KNM+QQG PLSADPRKLYRGVGAN +NMGSCTMIQFA GG+ KK++ G D R L E++ G+ G++SA VGSPLELIMIQQQRKG + T+ +A PS I RG G AVREGLWT GYLSIPPI+R L T +P+ FDS KARVPA+LLGGLF CYLTHPFDTVKTCMQGDIERT + F D+AK + E FYRGATFRYGRM AV MMD LQ
Sbjct: 1 MSSKLNEFQNATVGMAVGCVEVLCLQPLNYCKNMIQQGQPLSADPRKLYRGVGANCINMGSCTMIQFAAGGSLKKSVLGSDQTRNLTPSEEVACGLGGGILSASVGSPLELIMIQQQRKGKNTINTLKDVAVPSVITRGLLGTAVREGLWTVGYLSIPPIIRRELMTRYPERFDSVNKARVPAALLGGLFGCYLTHPFDTVKTCMQGDIERTTYGTFTDTAKKIYTESSIAGFYRGATFRYGRMVCAVFMMDVLQ 255
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Match: A0A7S3L885_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L885_9STRA) HSP 1 Score: 338 bits (868), Expect = 2.760e-114 Identity = 168/256 (65.62%), Postives = 199/256 (77.73%), Query Frame = 1
Query: 61 MSTKLNELENATVGMVVGCIEVICLQPFNYAKNMVQQGLPLSADPRKLYRGVGANVVNMGSCTMIQFAVGGAAKKALQGDDPNRKLAIYEQMGAGIFAGVVSALVGSPLELIMIQQQRKGLSLATTIGSIA-NPSNILRGYTGAAVREGLWTCGYLSIPPIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQ 825
MS++LNE +NATVGM VG IEV+ LQPFNYAKNM QQ P+S +P +YRGV AN VNMGSCTMIQFAVGG K+ + + +R L++YE+M AGI AG VS LVGSPLELIMIQQQRKGL L TTIG I NP+NI+RG+ G AVRE LWTCGYLSIPP+VR +L ++P+TF + +AR+PA+LLGGLFACY+THPFDTVKTCMQGDIER + F +A + E FYRGATFRYGRM AV MMD L+
Sbjct: 1 MSSQLNEFQNATVGMTVGVIEVLTLQPFNYAKNMTQQKQPISLNPLIMYRGVHANAVNMGSCTMIQFAVGGRLKQTILNGE-SRHLSLYEEMAAGICAGTVSGLVGSPLELIMIQQQRKGLPLGTTIGDITKNPANIMRGFVGCAVREALWTCGYLSIPPVVRRTLMESYPETFPDNNRARIPAALLGGLFACYMTHPFDTVKTCMQGDIERNTYGTFTQTASKIFAESNIPGFYRGATFRYGRMVCAVFMMDLLK 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1251.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1251.5.1 >prot_H-akashiwo_Contig1251.5.1 ID=prot_H-akashiwo_Contig1251.5.1|Name=mRNA_H-akashiwo_Contig1251.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=282bp RSLVLDWHWQLRLEGFPIIIMSTKLNELENATVGMVVGCIEVICLQPFNYback to top mRNA from alignment at H-akashiwo_Contig1251:68260..69105+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1251.5.1 ID=mRNA_H-akashiwo_Contig1251.5.1|Name=mRNA_H-akashiwo_Contig1251.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=846bp|location=Sequence derived from alignment at H-akashiwo_Contig1251:68260..69105+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1251:68260..69105+ >mRNA_H-akashiwo_Contig1251.5.1 ID=mRNA_H-akashiwo_Contig1251.5.1|Name=mRNA_H-akashiwo_Contig1251.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=846bp|location=Sequence derived from alignment at H-akashiwo_Contig1251:68260..69105+ (Heterosigma akashiwo CCMP452)back to top |