mRNA_H-akashiwo_Contig125.20.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A6S9K564_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K564_HETAK) HSP 1 Score: 174 bits (441), Expect = 5.260e-51 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA
Sbjct: 141 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 221
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A7S2U4C1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U4C1_9EUKA) HSP 1 Score: 132 bits (331), Expect = 3.730e-35 Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K I++KITGG+NV NIR+DCEGSLRRLGTD++D+YLLHWPARYTPQ+NWGQSL Y Y+AE+YP+YK+H +FE+IA
Sbjct: 94 RREKLCISTKITGGSNVNRENIRRDCEGSLRRLGTDYIDVYLLHWPARYTPQSNWGQSLMYDYDAENYPYYKNHATFEEIA 174
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: C1MX10_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MX10_MICPC) HSP 1 Score: 128 bits (322), Expect = 2.400e-33 Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K VIA+KITGG NVT +NI+KD EGSLRRLGTD++D+Y LHWPARYTPQ+NWGQSL Y E E PWY++H SFE+IA
Sbjct: 179 RREKLVIATKITGGGNVTKKNIKKDLEGSLRRLGTDYVDVYTLHWPARYTPQSNWGQSLQYHQETEAAPWYRNHASFEEIA 259
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A7R9THE7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9THE7_9VIRI) HSP 1 Score: 127 bits (318), Expect = 3.510e-33 Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K IA+KITGG NVT NIR+DCEGSLRRLGTDH+D+Y LHWPARYTPQ+NWGQSL Y +E E P+Y D TSFE+IA
Sbjct: 104 RRDKLCIATKITGGRNVTASNIRRDCEGSLRRLGTDHIDVYTLHWPARYTPQSNWGQSLEYHHERERDPYYADATSFEEIA 184
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A7S3F9S1_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F9S1_9VIRI) HSP 1 Score: 124 bits (310), Expect = 2.820e-32 Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K VIA+KITGGANVT NI +DCEGSL+RLGTD+LD+Y+LHWPARYTPQ+NWGQSL+Y + E+ +Y++H SFE+IA
Sbjct: 94 RREKLVIATKITGGANVTAGNIVRDCEGSLQRLGTDYLDVYMLHWPARYTPQSNWGQSLDYNHSVENELYYREHASFEEIA 174
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: C1EG41_MICCC (Aldo_ket_red domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EG41_MICCC) HSP 1 Score: 122 bits (306), Expect = 1.480e-31 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K VIA+KITG +NVT +NIRKD EGSL RLGTD++D+Y LHWPARYTPQ+NWGQSL Y E E PWYK+ SFE+IA
Sbjct: 85 RREKLVIATKITGSSNVTKKNIRKDLEGSLTRLGTDYVDVYTLHWPARYTPQSNWGQSLMYHVEQEQAPWYKNAASFEEIA 165
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A7S0T323_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T323_9CHLO) HSP 1 Score: 122 bits (307), Expect = 2.560e-31 Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K VIA+KITGG+NVT RNI+K EGSL+RLGTD++DLY LHWPARYTPQ+NWGQSL Y E E PWYK+ SFE++A
Sbjct: 153 RRDKLVIATKITGGSNVTKRNIKKALEGSLKRLGTDYVDLYTLHWPARYTPQSNWGQSLMYHVEQEQPPWYKNAASFEEVA 233
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A835Z1T9_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1T9_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.800e-31 Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K VIASKITGG+NV NI DCEGSLRRLGTD++DLYLLHWPARYTPQANWGQSL Y EAE + Y+ H SFE+IA
Sbjct: 136 RREKVVIASKITGGSNVNAANIAADCEGSLRRLGTDYMDLYLLHWPARYTPQANWGQSLAYHQEAERF--YRGHASFEEIA 214
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A7S0PJA9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PJA9_MICPS) HSP 1 Score: 122 bits (306), Expect = 5.530e-31 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 1 RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDHTSFEDIA 243
RR K VIA+KITG +NVT +NIRKD EGSL RLGTD++D+Y LHWPARYTPQ+NWGQSL Y E E PWYK+ SFE+IA
Sbjct: 199 RREKLVIATKITGSSNVTKKNIRKDLEGSLTRLGTDYVDVYTLHWPARYTPQSNWGQSLMYHVEQEQAPWYKNAASFEEIA 279
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Match: A0A7S2UB59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB59_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.500e-30 Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 4 RAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTPQANWGQSLNYRYEAEDYPWYKDH---TSFEDIA 243
R K VIASKITGG NVTPRNI++DCEGSL+RLGTD+LD+Y LHWP RY+PQANWGQSL Y E+++ P+++ TSFED+
Sbjct: 197 RDKVVIASKITGGRNVTPRNIKEDCEGSLKRLGTDYLDVYQLHWPQRYSPQANWGQSLKYNIESDESPYWRGQGGPTSFEDLC 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig125.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig125.20.1 >prot_H-akashiwo_Contig125.20.1 ID=prot_H-akashiwo_Contig125.20.1|Name=mRNA_H-akashiwo_Contig125.20.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=81bp RRAKTVIASKITGGANVTPRNIRKDCEGSLRRLGTDHLDLYLLHWPARYTback to top mRNA from alignment at H-akashiwo_Contig125:427366..432152+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig125.20.1 ID=mRNA_H-akashiwo_Contig125.20.1|Name=mRNA_H-akashiwo_Contig125.20.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4787bp|location=Sequence derived from alignment at H-akashiwo_Contig125:427366..432152+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig125:427366..432152+ >mRNA_H-akashiwo_Contig125.20.1 ID=mRNA_H-akashiwo_Contig125.20.1|Name=mRNA_H-akashiwo_Contig125.20.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=243bp|location=Sequence derived from alignment at H-akashiwo_Contig125:427366..432152+ (Heterosigma akashiwo CCMP452)back to top |