mRNA_H-akashiwo_Contig125.19.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A6S9K564_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K564_HETAK) HSP 1 Score: 220 bits (561), Expect = 8.590e-68 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1
Query: 97 MNAGRYDRRVALMASGGFLGGIFGSGKIGSAFGASNDAAGSKPFRPTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
MNAGRYDRRVALMASGGFLGGIFGSGKIGSAFGASNDAAGSKPFRPTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA
Sbjct: 1 MNAGRYDRRVALMASGGFLGGIFGSGKIGSAFGASNDAAGSKPFRPTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 111
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: B8C2G5_THAPS (Aldo_ket_red domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2G5_THAPS) HSP 1 Score: 120 bits (302), Expect = 2.190e-29 Identity = 79/158 (50.00%), Postives = 98/158 (62.03%), Query Frame = 1
Query: 10 LAIFALVSRAFHVTTPISV----SVPKKNAHCK-----MNAGRYDRRVALMASGGFLGGIFGSGKIG---------SAFGASNDAAGSKPFRPTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
LAI S AFH TP SVP+ ++ M + R V++MA GGFLGG+FG G G S G+ N +G P TNEVVK V+G+R +RLGG DI+VSE+GLGTQRWVS DFN+P+++ F FMDTAIL +GVNLIDTA
Sbjct: 7 LAITGTYSTAFHSHTPYHSPSCSSVPRMTSNDPNITPIMFSPRRRHSVSMMA-GGFLGGLFGGGDDGVNSFVPNASSTAGSGNVNSGKGP---TNEVVKTVNGMRQRRLGGSDIVVSELGLGTQRWVSADFNAPNKDQVFDFMDTAILKNGVNLIDTA 160
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S2UB59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB59_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.730e-28 Identity = 61/107 (57.01%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 109 RYDRRVALMASGGFLGGIFGSGKIGSAFGASNDAAGSKPFRPTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
R R +++ S G GGIFG S+ + SK P+NE+VK+VDG+ HKRLGG DIIVS++GLGTQRW S+DFN+P+QEDCF FMD AIL GVNLID A
Sbjct: 62 RSPTRRSVLLSAGMFGGIFGGDNKASSAPLGGGSYKSKG--PSNELVKIVDGMGHKRLGGSDIIVSDLGLGTQRWCSDDFNAPTQEDCFGFMDHAILKKGVNLIDVA 166
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S1ZMM6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZMM6_9STRA) HSP 1 Score: 114 bits (286), Expect = 6.730e-28 Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 181 GSAFGASNDAAGSKPFR---PTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
G G +N AG KPF+ PTNE++KVV+G++ +RLGG DIIVSE+GLGTQRWVS DFN+P++EDCF FMD AIL +GVNL+DTA
Sbjct: 84 GGMIGRAN--AGDKPFKRSGPTNEIIKVVNGMKRRRLGGSDIIVSELGLGTQRWVSSDFNAPNEEDCFAFMDEAILKNGVNLLDTA 167
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S4SBG1_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBG1_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.510e-27 Identity = 53/76 (69.74%), Postives = 66/76 (86.84%), Query Frame = 1
Query: 211 AGSKPFR---PTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
AG KPF+ PTNE++KVV+G++ +RLGG DIIVSE+GLGTQRWVS DFN+P++EDCF FMD AIL +GVNL+DTA
Sbjct: 92 AGDKPFKRSGPTNEIIKVVNGMKRRRLGGSDIIVSELGLGTQRWVSSDFNAPNEEDCFAFMDEAILKNGVNLLDTA 167
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S3DPA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPA9_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.570e-26 Identity = 46/66 (69.70%), Postives = 62/66 (93.94%), Query Frame = 1
Query: 232 PTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
PTN+VV+ V+G++H+RLGG DI+VSE+GLGTQRWVS DFN+P+++DCF+FMD AIL++GVNL+DTA
Sbjct: 28 PTNQVVRKVNGMKHRRLGGTDIMVSELGLGTQRWVSSDFNAPNEDDCFRFMDYAILENGVNLLDTA 93
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S4J614_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J614_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.040e-26 Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 211 AGSKPFRP---TNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
AG + ++ TNEVVKVV+G++ +RLGG DI+VSE+GLGTQRWVS DFN+PS+EDCF FMD AIL GVNLIDTA
Sbjct: 1 AGDREYKSRGATNEVVKVVEGMKRRRLGGSDIVVSELGLGTQRWVSADFNAPSEEDCFAFMDAAILKGGVNLIDTA 76
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S4MY32_9STRA (Hypothetical protein n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MY32_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.590e-25 Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 211 AGSKPFRP---TNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
AG + ++ TNEVVKVV+G++ +RLGG DI+VSE+GLGTQRWVS DFN+PS+EDCF FMD AIL GVNLIDTA
Sbjct: 1 AGDREYKSRGATNEVVKVVEGMKRRRLGGSDIVVSELGLGTQRWVSADFNAPSEEDCFAFMDAAILKGGVNLIDTA 76
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A7S4GI51_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GI51_9EUGL) HSP 1 Score: 108 bits (269), Expect = 1.400e-24 Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 1
Query: 232 PTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
PTNEVV VVDGIR KRLGGGDIIVSE+GLGTQRW S DFN+P + C KFMD AIL+SGVNLIDTA
Sbjct: 291 PTNEVVGVVDGIRQKRLGGGDIIVSEMGLGTQRWASADFNAPDEALCHKFMDRAILESGVNLIDTA 356
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Match: A0A1Z5JMB4_FISSO (Aldo_ket_red domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMB4_FISSO) HSP 1 Score: 107 bits (267), Expect = 1.420e-24 Identity = 57/104 (54.81%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 118 RRVALMASGGFLGGIFGSGKIGSAFGASNDAAGSKPFRPTNEVVKVVDGIRHKRLGGGDIIVSEVGLGTQRWVSEDFNSPSQEDCFKFMDTAILDSGVNLIDTA 429
RR L +S LGG FG G+ A+GAS+ TNE ++ V+G++H+RLGG DI+VSE+GLGTQRWVS DFN+P++ CF FMD AIL++GVNL+DTA
Sbjct: 39 RRTVLASS--LLGGFFG-GRKDPAYGASSKGK-------TNEFIRTVNGMKHRRLGGSDIVVSELGLGTQRWVSSDFNAPNEAACFAFMDKAILENGVNLLDTA 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig125.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig125.19.1 >prot_H-akashiwo_Contig125.19.1 ID=prot_H-akashiwo_Contig125.19.1|Name=mRNA_H-akashiwo_Contig125.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=143bp GLFLAIFALVSRAFHVTTPISVSVPKKNAHCKMNAGRYDRRVALMASGGFback to top mRNA from alignment at H-akashiwo_Contig125:400216..409036+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig125.19.1 ID=mRNA_H-akashiwo_Contig125.19.1|Name=mRNA_H-akashiwo_Contig125.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8821bp|location=Sequence derived from alignment at H-akashiwo_Contig125:400216..409036+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig125:400216..409036+ >mRNA_H-akashiwo_Contig125.19.1 ID=mRNA_H-akashiwo_Contig125.19.1|Name=mRNA_H-akashiwo_Contig125.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=429bp|location=Sequence derived from alignment at H-akashiwo_Contig125:400216..409036+ (Heterosigma akashiwo CCMP452)back to top |