mRNA_H-akashiwo_Contig125.18.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A7R9YCC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCC1_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.390e-43 Identity = 86/153 (56.21%), Postives = 108/153 (70.59%), Query Frame = 3
Query: 201 YMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALVCGGVF 659
YM L KLV+FS +HQ+ FS+ S LPFAIGQVQDAGLIFL+HMA +A A Q P+T VAT V L+TA LG+ALVV GRL+ R+VS LP+PVIGGYLAFIG+FC+EAG+ +C +++ P WL +L KNL L P + G +F
Sbjct: 72 YMPALCKLVLFSCAMHQLVFSVGSGLPFAIGQVQDAGLIFLAHMARNIAHRTADQS--PETTVATAVVCTALSTALLGLALVVFGRLRWARFVSYLPVPVIGGYLAFIGFFCIEAGLGLCVGQSLSKPEAWLSLLEPKNLILTIPCVATGLLF 222
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A7S1BZH2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZH2_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.640e-42 Identity = 85/154 (55.19%), Postives = 115/154 (74.68%), Query Frame = 3
Query: 213 LSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAA---QGEGPK-TIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALVCGGVFS 662
L+KL + SSM+HQ+SFS S+LPFAIGQVQDAGL+FLS MAS +A +++ +G P I++T V+LGLATAALG AL+ GRL+L VS LP+PV+GGYLAFIGYFCL+AGV +CA+ + T SDW +++ +++ LV P L+ G V +
Sbjct: 197 LTKLALLSSMVHQLSFSFCSTLPFAIGQVQDAGLLFLSAMASDIADHVSSMTLEGTDPTPAIISTAVVLLGLATAALGAALMAAGRLRLADAVSYLPLPVVGGYLAFIGYFCLQAGVGLCASEDMVTVSDWGKVVNVRDVGLVLPGLIGGVVMT 350
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A7S2P0D7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P0D7_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.110e-41 Identity = 83/148 (56.08%), Postives = 112/148 (75.68%), Query Frame = 3
Query: 201 YMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALV 644
+MA L+KLV+FSS +HQ++F++FSSL FAIG VQDAGLIFLS MA+ +A ++ G + +++TT VVL L TAALG+ L+++G+ +L VS LPMPVIGGYLAFIGYFCLEAGV +C ++TT SDW +L ++L L P L+
Sbjct: 78 HMAELAKLVIFSSFVHQLTFTLFSSLSFAIGTVQDAGLIFLSAMANTIANEIINDGGTIEEVISTTLVVLPLGTAALGLVLMLLGKFRLLDIVSYLPMPVIGGYLAFIGYFCLEAGVALCIGKSMTTISDWAYLLEPRSLLLATPGLL 225
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: B7FRQ0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRQ0_PHATC) HSP 1 Score: 160 bits (405), Expect = 1.150e-41 Identity = 82/151 (54.30%), Postives = 114/151 (75.50%), Query Frame = 3
Query: 198 EYMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALVCG 650
++M LSKLV+FSS++HQ+ F +FSSLPFAIG VQDAGLIFLS M++ VA+++ A G + +V+TT V+L ++TA LG+ALV +G+ +L VS LPMPV+GGYLAFIGYFCL+AGV +C + + +DW +L ++N+ L AP L G
Sbjct: 162 DHMNALSKLVIFSSLMHQLGFCLFSSLPFAIGTVQDAGLIFLSAMSNIVAKEILANGGTVEEVVSTTLVILAMSTACLGLALVAMGKFRLADIVSYLPMPVVGGYLAFIGYFCLQAGVALCISEPMVGLADWRYLLESQNVLLAAPGLGAG 312
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A835ZH57_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH57_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.690e-40 Identity = 85/154 (55.19%), Postives = 110/154 (71.43%), Query Frame = 3
Query: 201 YMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALVCGGVFS 662
YM LSKLV+FSS +HQ+ FS+ S+LPFAIGQVQDAGLIFLS + +A L Q E + +V+T V + TA+LGV LVVIG+L+L R+VS LPMPV+GGYLA+IG+FCL+AG+++ A A T DW Q K L L P ++ GG+FS
Sbjct: 95 YMPALSKLVLFSSAVHQLCFSLLSTLPFAIGQVQDAGLIFLSKITYIIALRL--QDEPAEVVVSTAVAVTAVCTASLGVCLVVIGKLRLARFVSYLPMPVVGGYLAYIGFFCLQAGLSLSAGKAFETLQDWAQFADPKLLLLCLPGVLAGGLFS 246
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A7S4IFX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IFX6_9STRA) HSP 1 Score: 152 bits (383), Expect = 9.940e-40 Identity = 81/151 (53.64%), Postives = 106/151 (70.20%), Query Frame = 3
Query: 198 EYMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALVCG 650
+ M L KLV+FSS +HQ+ F++FSSLPFAIG VQDAGLIFLS M++ +A+D+ G + +V+TT V+L L TAALG+ LVV+G+ +L VS LPMPV+GGYLAFIGYFCL AGV +C + ++ DW + NL L P L G
Sbjct: 38 DRMNALPKLVIFSSCMHQLGFTLFSSLPFAIGTVQDAGLIFLSAMSNIIAEDILNSGGTAEEVVSTTLVLLPLGTAALGLVLVVMGKFRLADAVSYLPMPVVGGYLAFIGYFCLMAGVALCISESMMELKDWAYLFDPHNLLLAVPGLGAG 188
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A2D4C0B0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0B0_PYTIN) HSP 1 Score: 152 bits (383), Expect = 1.020e-38 Identity = 80/153 (52.29%), Postives = 109/153 (71.24%), Query Frame = 3
Query: 201 YMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAA---QGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALVCG 650
YM+ L KLV+ S+ +HQ+ F++ SSLPFA+GQVQDAGLIFLS MAS V Q L Q + ++ATT L +TA LGVAL++ G+L++ +V LPMPV+GGYLAFIG++CLEAG+++ AN I PSDW Q+ ++L LV P ++ G
Sbjct: 139 YMSDLIKLVLTSAAVHQLCFTVSSSLPFAVGQVQDAGLIFLSAMASSVVQGLREHPHQHFSMEEVIATTLFTLAASTALLGVALIITGKLRIASFVQYLPMPVVGGYLAFIGFYCLEAGLSMMANKTIKDPSDWAQLANAESLLLVTPGVIAG 291
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: B5YMS3_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMS3_THAPS) HSP 1 Score: 150 bits (380), Expect = 2.890e-38 Identity = 80/148 (54.05%), Postives = 108/148 (72.97%), Query Frame = 3
Query: 201 YMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALV 644
+MA LSKLV+FSS++HQ +F+MFSSL FAIG VQDAGLIFLS MA+++A + +G +V+T +L L TA+LG+ L+++G+ +L VS LPMPVIGGYLAFIGYFCLEAGV +C + ++T +DW +L L L P L+
Sbjct: 1038 HMAALSKLVIFSSLVHQFAFTMFSSLDFAIGTVQDAGLIFLSVMANRIANKILDEGGTVDEVVSTAVCILPLGTASLGLVLILLGKFRLLDIVSYLPMPVIGGYLAFIGYFCLEAGVALCISKSMTKLTDWGYLLDPHLLLLATPGLL 1185
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: K0TRH0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TRH0_THAOC) HSP 1 Score: 149 bits (376), Expect = 6.180e-38 Identity = 81/147 (55.10%), Postives = 105/147 (71.43%), Query Frame = 3
Query: 204 MAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALV 644
+A LSKLVVFSS++HQ+ F++FSSL FAIG VQDAGLIFLS M++++A + + G +V+TT VVL L TAALG+ L+ +G+ KL VS LPMPVIGGYLAFIGYFC EAGV +C +T W +L ++L L P L+
Sbjct: 116 IAKLSKLVVFSSLVHQLCFTIFSSLNFAIGTVQDAGLIFLSAMSNQIADSILSGGGTIDEVVSTTLVVLPLGTAALGIVLIFLGKFKLLDIVSYLPMPVIGGYLAFIGYFCFEAGVALCIGKPMTELKHWAYLLEPQSLLLATPGLL 262
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Match: A0A7S3LAJ8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAJ8_9STRA) HSP 1 Score: 149 bits (377), Expect = 6.540e-38 Identity = 80/148 (54.05%), Postives = 103/148 (69.59%), Query Frame = 3
Query: 201 YMAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDLAAQGEGPKTIVATTTVVLGLATAALGVALVVIGRLKLGRYVSLLPMPVIGGYLAFIGYFCLEAGVTICANTAITTPSDWLQILTTKNLSLVAPALV 644
+M L+KLV+FSSM+HQI F FSSL FAIG VQDAGLIFLS MA+ +A + +GE + IV+TT +L TA LGV LV++G KL VS LPMPV+GGYLAFIGYFC +AGV +C + ++ + SDW + + L L P L+
Sbjct: 124 HMNALAKLVLFSSMMHQIGFLFFSSLDFAIGTVQDAGLIFLSSMANTIAARMQDEGESEEAIVSTTLALLSSGTALLGVILVIMGHFKLANAVSYLPMPVVGGYLAFIGYFCCQAGVALCISKSLVSVSDWSYLAEPRYLLLATPGLL 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig125.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig125.18.1 >prot_H-akashiwo_Contig125.18.1 ID=prot_H-akashiwo_Contig125.18.1|Name=mRNA_H-akashiwo_Contig125.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=153bp MAPLSKLVVFSSMIHQISFSMFSSLPFAIGQVQDAGLIFLSHMASKVAQDback to top mRNA from alignment at H-akashiwo_Contig125:399017..399771- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig125.18.1 ID=mRNA_H-akashiwo_Contig125.18.1|Name=mRNA_H-akashiwo_Contig125.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=755bp|location=Sequence derived from alignment at H-akashiwo_Contig125:399017..399771- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig125:399017..399771- >mRNA_H-akashiwo_Contig125.18.1 ID=mRNA_H-akashiwo_Contig125.18.1|Name=mRNA_H-akashiwo_Contig125.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=459bp|location=Sequence derived from alignment at H-akashiwo_Contig125:399017..399771- (Heterosigma akashiwo CCMP452)back to top |