mRNA_H-akashiwo_Contig1249.19.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A7S3USA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USA8_HETAK) HSP 1 Score: 293 bits (749), Expect = 2.400e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEMQFPSPSFAVQKIDVCQQHDGSADDENRFLSSIGGGSSSSPQQVKNDMDLFY 420
VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEMQFPSPSFAVQKIDVCQQHDGSADDENRFLSSIGGGSSSSPQQVKNDMDLFY
Sbjct: 218 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEMQFPSPSFAVQKIDVCQQHDGSADDENRFLSSIGGGSSSSPQQVKNDMDLFY 357
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A5J4YS39_PORPP (Protein YnbB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS39_PORPP) HSP 1 Score: 155 bits (393), Expect = 2.010e-43 Identity = 72/89 (80.90%), Postives = 77/89 (86.52%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEM 267
V+LG R LIAFC VQR SPVGAYI P PG+TPGYGDEVIFADGTF+DGSTLELSADGPLR PY +AQGGTHWTHWA+VLE ALQEM
Sbjct: 293 VRLGERDKLIAFCRAVQRQSPVGAYILPEPGQTPGYGDEVIFADGTFVDGSTLELSADGPLREPYVVYAQGGTHWTHWALVLEDALQEM 381
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A5J4YQ84_PORPP (Protein YnbB n=4 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ84_PORPP) HSP 1 Score: 155 bits (393), Expect = 1.260e-42 Identity = 72/89 (80.90%), Postives = 77/89 (86.52%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEM 267
V+LG R LIAFC VQR SPVGAYI P PG+TPGYGDEVIFADGTF+DGSTLELSADGPLR PY +AQGGTHWTHWA+VLE ALQEM
Sbjct: 391 VRLGERDKLIAFCRAVQRQSPVGAYILPEPGQTPGYGDEVIFADGTFVDGSTLELSADGPLREPYVVYAQGGTHWTHWALVLEDALQEM 479
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A5J4YIB6_PORPP (Protein YnbB n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIB6_PORPP) HSP 1 Score: 155 bits (393), Expect = 1.320e-42 Identity = 72/89 (80.90%), Postives = 77/89 (86.52%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEM 267
V+LG R LIAFC VQR SPVGAYI P PG+TPGYGDEVIFADGTF+DGSTLELSADGPLR PY +AQGGTHWTHWA+VLE ALQEM
Sbjct: 394 VRLGERDKLIAFCRAVQRQSPVGAYILPEPGQTPGYGDEVIFADGTFVDGSTLELSADGPLREPYVVYAQGGTHWTHWALVLEDALQEM 482
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A5J4YGH5_PORPP (Protein YnbB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YGH5_PORPP) HSP 1 Score: 155 bits (393), Expect = 5.010e-42 Identity = 72/89 (80.90%), Postives = 77/89 (86.52%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEM 267
V+LG R LIAFC VQR SPVGAYI P PG+TPGYGDEVIFADGTF+DGSTLELSADGPLR PY +AQGGTHWTHWA+VLE ALQEM
Sbjct: 403 VRLGERDKLIAFCRAVQRQSPVGAYILPEPGQTPGYGDEVIFADGTFVDGSTLELSADGPLREPYVVYAQGGTHWTHWALVLEDALQEM 491
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A0D2MKH1_9CHLO (Uncharacterized protein ynbB n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MKH1_9CHLO) HSP 1 Score: 138 bits (348), Expect = 5.150e-39 Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEMQ 270
V+LG+R + AFC +QR PVG+YI P PG T GYGDEVIFADGTF+DGST ELSADGPLR PY + QGGTHWTHWAI LE+A++E++
Sbjct: 72 VELGSRERMEAFCRGIQRRCPVGSYIRPVPGVTAGYGDEVIFADGTFVDGSTAELSADGPLRPPYVVYCQGGTHWTHWAIALESAVEELR 161
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: L1I8U7_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I8U7_GUITC) HSP 1 Score: 144 bits (362), Expect = 1.930e-38 Identity = 66/87 (75.86%), Postives = 74/87 (85.06%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQ 261
++L R NL+AFC VQR+SPVG+YI P PG T GYGDEV+FADGTF+DGSTLELSADGPLR PY A+ QGGTHWTHWAIVLE ALQ
Sbjct: 336 LKLLNRENLLAFCRAVQRNSPVGSYIVPEPGTTVGYGDEVVFADGTFIDGSTLELSADGPLRDPYVAYCQGGTHWTHWAIVLEEALQ 422
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A7S0J2I6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J2I6_9EUKA) HSP 1 Score: 134 bits (338), Expect = 5.950e-38 Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQ 261
V+LG +IA C VQR SPVG+ I P PG +PGYGDEVIFADGTF+DGSTLELS DGPLRAPY A+ QGGTHWTHW IVLE A++
Sbjct: 39 VRLGDPDKVIALCRAVQRFSPVGSSILPVPGISPGYGDEVIFADGTFIDGSTLELSGDGPLRAPYAAYLQGGTHWTHWKIVLEEAVK 125
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: A0A835ZAS5_9STRA (Aluminum resistance protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS5_9STRA) HSP 1 Score: 143 bits (361), Expect = 6.750e-38 Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEM 267
VQLGTR +AFC VQ+ SPV AY P PG+TPGYGDEVIFADGTF DGSTLELSADGPLR PY +AQG THWTHWAI+LE AL +M
Sbjct: 401 VQLGTRERTVAFCKVVQKLSPVNAYYRPEPGKTPGYGDEVIFADGTFTDGSTLELSADGPLREPYAVYAQGCTHWTHWAIILEEALVQM 489
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Match: R1CKM0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CKM0_EMIHU) HSP 1 Score: 142 bits (358), Expect = 1.410e-37 Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 1
Query: 1 VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGSTLELSADGPLRAPYTAFAQGGTHWTHWAIVLEAALQEM 267
V+LG+R ++AFC VQR SPVGA+I P G TPGYGDEV+FADGTF+DGSTLELSADGPLRAPY + QGGTHWTHWAIVL AL +
Sbjct: 358 VKLGSRAKVLAFCAAVQRCSPVGAHIVPVAGVTPGYGDEVVFADGTFIDGSTLELSADGPLRAPYAVYVQGGTHWTHWAIVLREALSAL 446 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1249.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1249.19.1 >prot_H-akashiwo_Contig1249.19.1 ID=prot_H-akashiwo_Contig1249.19.1|Name=mRNA_H-akashiwo_Contig1249.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=141bp VQLGTRGNLIAFCGCVQRHSPVGAYISPTPGRTPGYGDEVIFADGTFMDGback to top mRNA from alignment at H-akashiwo_Contig1249:245120..253958+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1249.19.1 ID=mRNA_H-akashiwo_Contig1249.19.1|Name=mRNA_H-akashiwo_Contig1249.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8839bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:245120..253958+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1249:245120..253958+ >mRNA_H-akashiwo_Contig1249.19.1 ID=mRNA_H-akashiwo_Contig1249.19.1|Name=mRNA_H-akashiwo_Contig1249.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=423bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:245120..253958+ (Heterosigma akashiwo CCMP452)back to top |