mRNA_H-akashiwo_Contig1249.15.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A0M0K8V5_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8V5_9EUKA) HSP 1 Score: 240 bits (612), Expect = 6.500e-72 Identity = 165/436 (37.84%), Postives = 211/436 (48.39%), Query Frame = 1
Query: 31 PKLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKK------VHGELPE-VWLDGSPID------GEHPPPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDGHHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTFRLHQQGGE-------------------SIDNENDLVE----------------------------------------------LLHAPQKNINCVACTDDYEWWKRHGYAPSAGKPVW--LDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCE 1098
P+LVLHFD+NETI+ DPA GDS+E+ L+K+I K AFV+ G E VW DGSP+D G PPPL W PEG +Y A + AK F GSPG Y E+L++ALRWP P PD RL DG++ +PAFF T+ ELA R FSIV+RTFGTD+ VAAA+ AF++G H P + L D +W+G Y +TG F L + + + D + VE + AP+ +I V TD YEWW+ YAPSAGKP + LD V +FFDDNIHND +DSIVAV + ++ S + PLSG T HG+ L KVPTI+PIL WF+EQ+ E
Sbjct: 8 PRLVLHFDINETIMLGDPAGGDSYEDTLHKVIAKVAFVRPNPAAGTAEGRWTEYVWHDGSPLDPLCREVGAPPPPLFFDWHLPEGVTAFYKVH-ALKQFAKCFATPGSPGEIYAAELERLRDALRWPEGTP--------PDPRLSADGYYTFLPAFFHTLSELAAGDRDFSIVLRTFGTDLPHVAAAVSAFADGEHPLWKGQKFPSLRLRARD----------LWSGRYGAETGAFTLRRPHTDERHDERVSSARAAALAALAAADEDGTPVEPRTLATDLEVAAELSGARHDAXXXXXXXXXXXXXXPAPSDRSAVSGVPRAPRGSICGV--TDHYEWWREREYAPSAGKPFFWTLDDVTTHT----LFFDDNIHNDPDDSIVAVRARRDAS-SPYHPLSGDATRKLHGLMLRKVPTIKPILERGWFLEQLAASE 417
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A5J4YVR0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVR0_PORPP) HSP 1 Score: 236 bits (601), Expect = 2.780e-71 Identity = 149/362 (41.16%), Postives = 218/362 (60.22%), Query Frame = 1
Query: 31 PKLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHGEL-PEVWLDGSPIDGEHPPPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDG-HHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTFRLHQQG-GESIDNENDLVELL---HAPQ-KNINCVACTDDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLE--HGIHLVKVPTIEPILNPMWFIEQID 1089
P+LVLHFD+NETIL DPA GD E+CLNK + K FV++ P +W +P G P + T+WVWP+G V +Y D R AKTFTE G+ GA+ R ++ ++ +ALR P +GE D RL +DG H+F++PAFF T+ EL R IV+RTFG D++DV AA+ AF+E +E P S + H ++++ +W+G YDR +G F L Q G + +E + V ++ H P + ++ +A +DDYEWW+ +G+AP GKP+WL + R + + IFFDDNIHN + +SIVAV +S + F L GA L + HG + + PT+ PIL+ WF+++I+
Sbjct: 15 PRLVLHFDLNETILVTDPAGGDGLEDCLNKALAKQVFVRRESDPSGPPIW--ENPESG---PEINTSWVWPDGCVLFY---DVYRAHAKTFTEPGNYGASLRGLYLEMLDALRIP------EGETI--DPRLSQDGKHYFVLPAFFHTLRELRKRSGHTRIVLRTFGHDLSDVCAAINAFAE----TEPSPAGAPASA-SGWHEMKCDESH-MWDGRYDRQSGQFVLSQPSTGRACKSEEEAVAVIEGRHVPHAEGMSIMAISDDYEWWRGNGFAPECGKPLWLT-LTRGHAVH-IFFDDNIHNKARNSIVAVRLR-TSPENPFCALPGALVLEKQLHGKCMWRCPTVRPILDHNWFLQKIE 351
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: R1BE92_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BE92_EMIHU) HSP 1 Score: 234 bits (598), Expect = 9.010e-71 Identity = 147/371 (39.62%), Postives = 195/371 (52.56%), Query Frame = 1
Query: 37 LVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHGEL---------PEVWLDGSPI--DGEHPPPLCTTWVW--PEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLC-RDGHHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTFRL--HQQGG--ESIDNENDLVELLHAPQKNINCVACTDDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKC 1095
LVLHFDVNETI+ DPA GD++++ LNKI+ KSAF + G L P W DG+P+ PPPL W + P G +Y R AK F + GSPGA Y E+ + ALRW A P L DG L+PAF++T+ L GRSFS+V+RTFG+D+ V AA+ AF+ G H ++ P + L +W G YD + G F L H +G +I +E + V L +P D Y WW HG P+AGKP+WL E L FFDDNIHND +DSIV+V + + F PLSGA+ HG L +VPT++P+L P WF+ +I+ C
Sbjct: 9 LVLHFDVNETIMIGDPAGGDTYDDSLNKILAKSAFCRAT-GPLGKNGACDITPTAWHDGTPMAESPPAPPPLQPGWTFDTPPGAAAFYKQPALKRAHAKKFADAGSPGAVYAAQRERCRAALRW----------AHAPHPALSSEDGAGTLLPAFYRTLDCLHRSGRSFSVVLRTFGSDLPRVQAAINAFARGEH-PDYPEGAPGLELPAE----------RMWRGRYD-EGGRFSLQPHDEGSGAPTITDEAEAVRALSSP----GVSGVMDHYGWWDSHGNDPAAGKPLWLTLEEATTRHL--FFDDNIHNDPQDSIVSVRARRDGEAAAFSPLSGAQICSLHGAVLRRVPTMQPVLEPDWFLAEIEAC 350
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A7S2MS45_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MS45_9EUKA) HSP 1 Score: 223 bits (567), Expect = 3.350e-66 Identity = 144/366 (39.34%), Postives = 191/366 (52.19%), Query Frame = 1
Query: 181 DGSPI------DGEHPPPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDG-HHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTF--------------------------RLHQQG-GESIDNE------------------NDLVE-----LLHAP-QKNINCVACTDDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCEQA 1104
DGSPI PPPL + WPEG VP+Y+ + + AK+FTE G G AYR ++E+L++ALR P GQ+G L D RL DG H FL+PAFF T+ EL GR F++V+RTFGTD V AL A++EG H P VP + +T D + +W G YD +G F RL +G G++ E N L E L+ A + + + CTD Y+WWK HGY+PSAGKP+WL + + IFFDDNIHND++DSIVAV + G + S F PLSG T G+ LV+ PT +P+L+ WF+ +I CE A
Sbjct: 2 DGSPICITDTGPSSTPPPLQYNFEWPEGCVPFYNVKELKKAHAKSFTEPGKAGRAYRLMYEELEQALRLP---VGQEG---LVDKRLSHDGVHWFLLPAFFFTLYELHRTGRDFALVVRTFGTDGPAVGEALNAWAEGLH-----PTVPGVPSLTID------PSRDLWQGQYDA-SGAFTLQRAVLSKVVAAPPTSTTPGGRRDARLRPEGVGDTSQKEETPDRSHRSPASKRRSAANSLSEQAALALMEAKGEAEPHGIVCTDHYDWWKHHGYSPSAGKPLWLTISDSK--VHHIFFDDNIHNDAKDSIVAVRARGDPSESAFTPLSGEATCKLQGVLLVRTPTPQPVLDQRWFLNRIAACEAA 347
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A812XBB2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XBB2_9DINO) HSP 1 Score: 228 bits (580), Expect = 6.240e-63 Identity = 144/370 (38.92%), Postives = 196/370 (52.97%), Query Frame = 1
Query: 34 KLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHGELPEVWLDGSPIDGEH-----PPPLCTTWVWPEGTVP-YYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDGHHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAH-----LSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGT--FRLHQQGGESIDNENDLVELLHAPQKNINCVACT-DDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCEQ 1101
KLVLHFDVNETI+ DPAAG F LN II K+AF+ K + W DGSP+D PPPL T + PE ++ D + TE +PGA YRP++E+L EALRW ++ P+ GHHFL+PAFF + EL +GR FS+VIRTFGTDI +VA ++ AF+EG H + + V + S D + + + Y+ G+ F E + ++VE AC DDY +WK + Y P +GKP WL E ++ IFFDDNIHND +DSIV + S++ S FR LSG T G+ LVK ++ IL+P +F+ I +CE+
Sbjct: 11 KLVLHFDVNETIMVGDPAAGIDFGASLNNIIAKAAFISKTG----KTWHDGSPLDPSQRSDSSPPPLVTGFEVPEDCDRCFFRLRDDPSWPSSRLTEPQTPGAVYRPLYEQLVEALRWKHE----------PNEIFAAGGHHFLLPAFFHMLSELEKQGRDFSVVIRTFGTDIPEVAKSVAAFAEGLHPDFPMQTARLRSVVQHSGWAVRRKDRSDPSSPILLRRYEEPIGSSGFGKDLTTPEKLKYTEEIVENSIPDFLTTGPAACVRDDYFYWKGNHYRPESGKPAWLTLDEE--NVQHIFFDDNIHNDPDDSIVGIRIRQSASDS-FRNLSGEVTRRLEGVFLVKAQPVDAILDPDYFLRNIHRCEE 363
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A812GJI8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812GJI8_9DINO) HSP 1 Score: 221 bits (563), Expect = 1.350e-61 Identity = 144/372 (38.71%), Postives = 190/372 (51.08%), Query Frame = 1
Query: 34 KLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHGELPEVWLDGSPID-----GEHPPPLCTTWVWPEGTVP-YYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDGHHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAH-----LSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTFRLHQQ--GGESIDNENDLVELLHAPQKNINCVACT-DDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCEQAW 1107
KLVLHFDVNETI+ DPAA F LN II K+ FV E E W DGSP+D G PPL T + P G +Y A TE G+PGA YRP++E+L E+L W + PD GHHFL+PAFF+T+ EL +GR FS+VIRTFGTDI +VA ++ F+EGAH E PE S + + Y+ TG L E++ ++ E V C DDY +WK + Y P GKP+WL + + IFFDDNIHND DSIV + + S+ S FR +SG T G+ LVK ++ I +P +F+ I +CE+++
Sbjct: 40 KLVLHFDVNETIMVGDPAAAVDFGSSLNNIIAKATFVS----ETGETWHDGSPLDPTLRSGGSVPPLVTGFDTPPGCDRCFYRCRRDPSWPANRLTEPGTPGAIYRPLYEELGESLSWKYE----------PDEVFAPGGHHFLLPAFFRTLVELGKQGRDFSVVIRTFGTDIPEVARSIGKFAEGAHPGFPFKEERWRSAPEQSHWALRPLERSSPSSPFVLRRYEEYTGIEGLGADLTAPETLKYTEEIEESRIPDFLEAGPVVCVRDDYFYWKGNRYRPQTGKPLWLTLHDDS--VQHIFFDDNIHNDPNDSIVGIRARESTADS-FRAISGEATRKLEGVFLVKAQPVDAIRDPEYFLRCIRRCEESF 394
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A7S4C4U5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C4U5_CHRCT) HSP 1 Score: 205 bits (522), Expect = 4.300e-60 Identity = 127/317 (40.06%), Postives = 170/317 (53.63%), Query Frame = 1
Query: 184 GSPIDGEHPPPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDG-HHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTFRLHQQGGES-------IDNENDLVELLHA---PQKNINCVACTDDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCEQ 1101
GS I G P L T+W WP+G VP+Y + AK+FTE GSPG YR V+ L++ALR P D RL DG HHFL+PAFF+T+ L R+FS+VIR++G+D V+ AL+A++EGAH P V ++ + + W Y D G+F L Q + + +E+ V ++ A P C DDY WWK+H PS+GKP+WL + L FFDDNIHND+ DSIVAV S+ F +G T HGI LV+ PT+EPIL WF+E+ID E+
Sbjct: 3 GSVILGGSVPALITSWEWPDGCVPFYKIKPLGKKFAKSFTEAGSPGHIYRLVYNALEQALRLPET-------TGAVDPRLTLDGAHHFLLPAFFETLDSLHRTKRNFSLVIRSYGSDGAAVSDALRAWAEGAH-----PTVRGVTSLAPCAS-------ASWRAEY-ADDGSFTLRPQASDGGVVEAGRVLSESAAVTMMEAIGDPPSRPRATLCRDDYSWWKKHACMPSSGKPLWLTLGDSSAHHL--FFDDNIHNDANDSIVAVRVRESAEAP-FAAATGEATRRLHGICLVRCPTLEPILRTSWFLERIDAAER 296
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: B7G4B5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4B5_PHATC) HSP 1 Score: 204 bits (519), Expect = 7.390e-59 Identity = 134/377 (35.54%), Postives = 192/377 (50.93%), Query Frame = 1
Query: 34 KLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHGEL-----------PEVWLDGSPIDGEHP--------PPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDGHHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYDRDTGTFRLHQQGGESIDNENDLVELLHAPQKNINCVACTDDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCEQAW 1107
+LV+HFD+NETIL D A GD+ E+C++KII KSA+VK G P W +G I E+ PPL T W WP G PYY A + +A+TF G+ Y+ + +++E L P+ KPG ++PAFF+T+ +L++R + +++V RT G+D+ +A A AF+ G H + P L+ S H + W+ D D + GE I + + ++L C DDYE+WK H + P AGKPVW + R ++ I DDNIHN S DSI + +GS FR LS E + GIHLV+VPT+ PIL P WF+EQID ++ +
Sbjct: 31 RLVVHFDINETILVGDDAGGDTREDCIHKIIAKSAYVKIPFGYAGGSYEDNSNLEPTEWWNGLLIREEYDEKLALNRVPPLYTGWQWPPGCCPYYRT--AFKNRARTFVNHH--GSLYKSTYLRVEELLPIPDSKPGNAFSVFA-----------HMLPAFFETVVKLSSRPQPYTLVFRTMGSDLEKIATAFNAFASGKHPN--YPNFQREDLIISRH----DLVEGRWSKEVDLDGNHVFQFWRAGEMIASGD--AQVLDFLDSRSVC-GIQDDYEFWKVHRHQPWAGKPVW---IPRSKEVQHILLDDNIHNLSHDSIASTRVE-REDGS-FRTLSDEEIRDQQGIHLVRVPTVAPILQPTWFLEQIDSAQRRF 378
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A7S0LRH7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRH7_9EUKA) HSP 1 Score: 197 bits (500), Expect = 1.170e-56 Identity = 117/282 (41.49%), Postives = 156/282 (55.32%), Query Frame = 1
Query: 34 KLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHGELPEV----------WLDGSPI------DGEHPPPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDGHHFLI-PAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYD---RDTGTFRLH--QQGGESIDNENDLVELLHAPQKNINCVACTDDYEW 813
KL+LHFDVNETI+ DPA GDSFE+CLNKIICKSAF++ G + W DGSP+ + P L + WPEG VP+Y + AK FT SPGA YRP+FE+L+ ALR P G+ DSR RDG H+L+ PA F+T+ L GR F +V+RTFG+D DVAAA+ A++EG H P V +S + HA G +W G Y+ G +R+ + GG + +E + +E+ A + + CTDDY W
Sbjct: 65 KLILHFDVNETIMVGDPAGGDSFEDCLNKIICKSAFIRAKSGPASDALSEDDLGKLEWWDGSPLAEVGATEDREAPALLPLFDWPEGCVPFYKNPKLKKAYAKIFTNANSPGAVYRPLFEQLERALRLPT------GDEI--DSRFSRDGEHYLVLPALFETLHTLHTAGRDFCLVLRTFGSDAADVAAAISAWAEGKH-----PTVAGVSSLAI-HAAG------LWQGRYEAAGEARGEYRVRGAEAGGREL-HETEALEMFEARGAAPSALICTDDYGW 325
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Match: A0A7S3ZPK2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPK2_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.540e-55 Identity = 139/377 (36.87%), Postives = 190/377 (50.40%), Query Frame = 1
Query: 31 PKLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKVHG-ELPEVWLDGSPID---------------GEHPPPLCTTWVWPEGTVPYYHASDAARGQAKTFTEDGSPGAAYRPVFEKLKEALRWPNQKPGQDGEAALPDSRLCRDG-HHFLIPAFFKTICELANRGRSFSIVIRTFGTDINDVAAALQAFSEGAHLSEFVPVVPEMSLMTSDHADGGEQTYTVWNGSYD---RDTGTFRLHQQGGESIDNENDLVELLHAPQKNINCVACTDDYEWWKRHGYAPSAGKPVWLDYVERPYDILPIFFDDNIHNDSEDSIVAVPSSGSSNGSRFRPLSGAETLLEHGIHLVKVPTIEPILNPMWFIEQIDKCEQ 1101
P+LVLHFDVNETI+ DPA GDSFE+ LNK++ K+AFV++ G L + W DG+ G+ L W P+ + + R KTFTE + + ++L LR P PG D +A DG HH +PAFF+T+ L + GR S+VIRTFG+D VA AL+A+ G H + P A Q ++ G YD R T T L+ G + +E V L+ P+ + DDY WW +H AP+AGKP W + R D IFFDD+I N SIVA S+ G F+PL G T HG +LV+VPT+ P+ + WF+++I +CEQ
Sbjct: 10 PRLVLHFDVNETIMVADPAGGDSFEDVLNKMLAKTAFVRRKDGASLHDEWKDGAAAPDELEWRXXXSLHDDRGDPEQALWLRWEKPDDGSRAFRWDEVHR---KTFTETFK---RFSGIKQELAAQLRLP---PG-DWDACFKTD----DGQHHRFLPAFFETLRVLLDSGRDVSLVIRTFGSDGPTVALALRAWIAGRHPTVKAP----------QQAPDWVQRDRIFAGKYDAEGRYTLTPPLNDDGRGACLDEAAAVALMEEPR---SATVIRDDYAWWAKHDEAPAAGKPFW---ITRGSDCHHIFFDDHIRNSDRKSIVAARCR-SAPGEAFQPLDGPATRALHGAYLVRVPTLLPVRDQRWFLDRIRECEQ 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1249.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1249.15.1 >prot_H-akashiwo_Contig1249.15.1 ID=prot_H-akashiwo_Contig1249.15.1|Name=mRNA_H-akashiwo_Contig1249.15.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=369bp MEFESQQYHHPKLVLHFDVNETILCDDPAAGDSFEECLNKIICKSAFVKKback to top mRNA from alignment at H-akashiwo_Contig1249:124106..125410+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1249.15.1 ID=mRNA_H-akashiwo_Contig1249.15.1|Name=mRNA_H-akashiwo_Contig1249.15.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1305bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:124106..125410+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1249:124106..125410+ >mRNA_H-akashiwo_Contig1249.15.1 ID=mRNA_H-akashiwo_Contig1249.15.1|Name=mRNA_H-akashiwo_Contig1249.15.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1107bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:124106..125410+ (Heterosigma akashiwo CCMP452)back to top |