mRNA_H-akashiwo_Contig1248.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 217 bits (552), Expect = 1.380e-61 Identity = 111/226 (49.12%), Postives = 148/226 (65.49%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPICRDYKGNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREYNEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSI-FMSPYEKLFKKKPSV 675
H R H+SE RIR M K G+IP + I DKL+FC CA AK T+ HS + A RPL +H DVAG D K K+ ++ DE+TRF R FFMK K+++LPH ++ + I+R + L V+ +RLDNG E++E + CD+ GI++E+TG+D+P SNGIAER+NR V+DMTR V+ AS L YWSEA YS HT+NR T S +PY+ LFKKK S+
Sbjct: 48 HHRCVHISERRIRMMAKAGIIPASSIKATDKLSFCEDCAMAKATRQPHSKKPRFDVATRPLQCLHCDVAGKFPSDSKSRKWMLIVCDEYTRFRRCFFMKHKNEVLPHMQSFISMIQRVTQNNSLLVENIRLDNGTEFSE-LAAFCDRSGILLEQTGKDNPASNGIAERSNRIVLDMTRVVLRASGLSNYYWSEAAKYSVHTINRTTTSSSRSTTPYQSLFKKKASI 272
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A6H5HW13_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5HW13_9HYME) HSP 1 Score: 147 bits (372), Expect = 4.010e-37 Identity = 85/230 (36.96%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPICRDYKGN-KFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREYNEKMTNHCDKL----GIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
H R+GH++ ++ M ++ + TD + + CSTC AK+T+ SRS +Y A PL +HTDV GP+ G ++FV F DEHTRFC V+ MK+KS ++ F+ Y N + ++ ++ D G+EY+ N DKL GI T P+ NGIAER NR++++ R +++ S LPR +W+EAV+ + + NR YT ++ +PYEK KP++
Sbjct: 959 HVRLGHLNYKDLKTMFQKRYVEGTDTVQIEDIGNCSTCVAAKMTREPFQSRS-QY-AKNPLEVIHTDVCGPMRTTSNGGARWFVTFIDEHTRFCHVYPMKEKSQVVEKFLEYKNLVENQTGH---FIKELQSDGGKEYD---NNRLDKLLKDAGIKRRFTVPHTPQQNGIAERKNRTLVETARCLLIQSGLPRCFWAEAVVTANYIRNRCYTETVGCTPYEKWTGHKPNI 1180
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A6H5IZ89_9HYME (Integrase catalytic domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IZ89_9HYME) HSP 1 Score: 146 bits (368), Expect = 1.270e-36 Identity = 84/231 (36.36%), Postives = 134/231 (58.01%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVK----EGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPICRDYKGN-KFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREY-NEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
H R+GH++ + ++ M++ EG+ ++ ++D + CSTCA AK+T+ SR Y A +PL +HTDV P+ KG ++F F DEHTRFC V+ MK+KS + FV + N + + ++ ++ D G EY N K+ N C GI T P+ N +AER NR++++ R ++ S LP+ +W+EA++ + +T NR YT +I +PYEK +KP V
Sbjct: 292 HARLGHLNSNDLKTMIQKQHAEGM---GNVKVED-IGCCSTCAIAKMTREPFESRV-RYAA-KPLEVIHTDVCSPMRTISKGGARWFATFIDEHTRFCHVYLMKEKSQVTEKFVEFKNMVEKQTG---YSIKELQSDGGGEYDNRKLDNLCKDAGIKRRFTVPHTPQQNCLAERKNRTLVETARCLLTQSGLPKSFWAEAIMTANYTRNRCYTNTIGCTPYEKWTGRKPDV 513
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A6H5IEN4_9HYME (Integrase catalytic domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IEN4_9HYME) HSP 1 Score: 144 bits (362), Expect = 7.840e-36 Identity = 80/227 (35.24%), Postives = 129/227 (56.83%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPI-CRDYKGNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREY-NEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
H R+GH++ ++ M ++ + TD + + CSTC AK+T+ SRS +Y A PL +HTDV GP+ G ++FV F DEHTRFC V+ MK+KS ++ F+ Y N + ++ ++ D G+EY N ++ GI P+ NGIAER NR++++ R +++ S LPR +W+EA++ + + NR YT ++ +PYEK KP++
Sbjct: 402 HVRLGHLNYKDLKTMFQKRYVEGTDTVQIEDIGNCSTCVAAKMTREPFQSRS-QY-AKNPLEVIHTDVCGPMRTTSNDGARWFVTFIDEHTRFCHVYPMKEKSQVVEKFLEYKNLVENQTGH---FIKELQSDGGKEYDNNRLDELLKDAGIKRRFMVPHTPQQNGIAERKNRTLVETARCLLIQSGLPRCFWAEAIVTANYIRNRCYTETVGCTPYEKWTGHKPNI 623
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: W8C110_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8C110_CERCA) HSP 1 Score: 141 bits (356), Expect = 5.270e-35 Identity = 76/227 (33.48%), Postives = 122/227 (53.74%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPI-CRDYKGNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREY-NEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
HCRMGH++E +R M K + N ++KL+ C CA K+ ++ + + L VHTDV GP+ C G K+F+ F D+ +R+C ++F+KQKSD F + A + +++ ++ DNGREY + + + K GI T P NG+AER NR++++M R +M S +P +W+EA+ + + NR T+S PY+ K P+V
Sbjct: 198 HCRMGHLNERDLRKMNKNSYVYGLKFNNEEKLSECEVCASEKLVRAAFPKNITDKRSSELLEIVHTDVCGPMRCESNGGKKYFITFIDDMSRWCEIYFLKQKSDAFDAFKKFKAAAEKFTGH---KIKSLQSDNGREYCSHEFDAYLQKEGIKRRLTAPHTPEQNGVAERKNRTLVEMARCLMKQSGVPSSFWAEAINTACYIRNRCITKSTGEVPYKIWANKTPTV 421
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A6H5I9H0_9HYME (Integrase catalytic domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I9H0_9HYME) HSP 1 Score: 141 bits (355), Expect = 7.010e-35 Identity = 79/228 (34.65%), Postives = 128/228 (56.14%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDM-VKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPICRDYKGN-KFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREYNEKMTNHCDK-LGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
H R+GH++ ++ M K+ D+ ++D ++ CSTCA AK+T+ R+ T +PL VHTDV GP+ KG ++FV F DEHTRFC V+FMK K+ + F+ + N + ++ ++ D G+EYN N K GI T P+ NG+AER NR++++ R +++ S LP +W+EA+ + + NR Y+ ++ +P+EK KP +
Sbjct: 423 HARLGHLNSKDLKTMFAKKHAEGIDDVQIED-IDQCSTCAAAKMTREPFQPRTKYAT--KPLEVVHTDVCGPMRTTSKGGARWFVTFIDEHTRFCAVYFMKDKAQVTDRFIEFKNLVENQTGHT---IKELQSDGGKEYNNNRQNKLLKDAGIKRRFTVPHTPQQNGLAERKNRTLVETARCLLLQSGLPASFWAEAIHTANYIRNRCYSETVGCTPFEKWTGSKPCI 644
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: UPI00178C26DE (DDE-type integrase/transposase/recombinase n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00178C26DE) HSP 1 Score: 135 bits (340), Expect = 2.750e-34 Identity = 78/230 (33.91%), Postives = 131/230 (56.96%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPICRDYK------GNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREYNEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPS 672
H R+GH++ + IR ++ IP+ I++K K C C +AK+TK+ S +S E + PL +H+DV D+K GNK+F+ F D+ TR+ V+ +K K + + F+ Y N + ++ +++ VR D G EY + + C +GI+ E+T P+SNG+AER NR++ DM ++++S LP+ W EA+L S + LN+ + +PYE ++PS
Sbjct: 23 HGRLGHVNFNSIRRLINMEHIPKFTIDVKHK---CEVCVEAKLTKT--SFKSVERKTE-PLELIHSDVC-----DFKSIQTRGGNKYFITFIDDSTRYSYVYLLKNKHEAIDKFILYKNEVENQLNR---RIKTVRSDRGGEYEAPIGDFCASVGIVHERTAPYSPQSNGVAERKNRTLKDMMNAMLVSSGLPQNMWGEAILTSNYLLNKVPRKKYDKTPYELWKGRRPS 238
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A5N6PU40_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PU40_9ASTR) HSP 1 Score: 136 bits (342), Expect = 7.810e-34 Identity = 79/229 (34.50%), Postives = 133/229 (58.08%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGP---ICRDYKGNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREY-NEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
HCR+GH+S+SRI+ + EG++ T +D + C +C K+TK D + E D LA +HTDV GP + R+++ ++FV F D+++R+ V+ MK K + F + N + + ++ +R D G EY + + NH + GII + T P+ NG++ER NR+++DM R++M +NLP +WS A++ +A +N A T+ + +PYE F KP++
Sbjct: 111 HCRLGHISKSRIKRLQSEGILESTG---QDSFDDCESCLAGKLTK-DPFTHVGERAKDL-LALIHTDVCGPFRTMSRNHE--RYFVSFIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKT---IKALRSDRGGEYLSLEFINHLKERGIISQPTPPGTPQLNGVSERRNRTLLDMVRSMMCRTNLPHSFWSFALMTAARIVNLAPTKKVNKTPYEIWFGTKPNL 329
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A2Z6N9Q0_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N9Q0_TRISU) HSP 1 Score: 137 bits (346), Expect = 1.160e-33 Identity = 78/228 (34.21%), Postives = 130/228 (57.02%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGPI-CRDYKGNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREYNE-KMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIF-MSPYEKLFKKKPSV 675
H R+GH S S ++ M L+ I + D ++ C C K ++ S + A L +HTDV GP+ GNK+F++F D+ TR C VFF++Q+SD+ P F ++ + + VD Q++++R DNG EY + C+++GI + T P+ NG++ER NR+VM+M R ++ +P+ +W+EAV S + LN T+ + +P+E +++KPSV
Sbjct: 459 HRRLGHFSYSTLKQMSSHDLVENLPI-IDDVVDMCDVCQFGKQSRLPFPVEST-WRASEKLQLIHTDVCGPMPTTSLNGNKYFLLFIDDFTRMCWVFFLRQESDVFPAFQSFKLMVEKEVD---CQIKKLRSDNGNEYTAGEFKVFCEQVGIQHQFTVPYTPQQNGVSERKNRTVMEMARCLLFEKGIPKTFWAEAVNTSVYLLNLLPTKVLKGKTPFEAWYERKPSV 681
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR) HSP 1 Score: 136 bits (342), Expect = 3.850e-33 Identity = 79/229 (34.50%), Postives = 133/229 (58.08%), Query Frame = 1
Query: 1 HCRMGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPEYTADRPLARVHTDVAGP---ICRDYKGNKFFVVFKDEHTRFCRVFFMKQKSDILPHFVTYCNAIRRAVDDPQLQVQRVRLDNGREY-NEKMTNHCDKLGIIMEKTGRDDPRSNGIAERTNRSVMDMTRTVMMASNLPRKYWSEAVLYSAHTLNRAYTRSIFMSPYEKLFKKKPSV 675
HCR+GH+S+SRI+ + EG++ T +D + C +C K+TK D + E D LA +HTDV GP + R+++ ++FV F D+++R+ V+ MK K + F + N + + ++ +R D G EY + + NH + GII + T P+ NG++ER NR+++DM R++M +NLP +WS A++ +A +N A T+ + +PYE F KP++
Sbjct: 111 HCRLGHISKSRIKRLQSEGILESTG---QDSFDDCESCLAGKLTK-DPFTHVGERAKDL-LALIHTDVCGPFRTMSRNHE--RYFVSFIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKT---IKALRSDRGGEYLSLEFINHLKERGIISQPTPPGTPQLNGVSERRNRTLLDMVRSMMCRTNLPHSFWSFALMTAARIVNLAPTKKVNKTPYEIWFGTKPNL 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1248.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1248.4.1 >prot_H-akashiwo_Contig1248.4.1 ID=prot_H-akashiwo_Contig1248.4.1|Name=mRNA_H-akashiwo_Contig1248.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=222bp MGHMSESRIRDMVKEGLIPETDINLKDKLNFCSTCAKAKITKSDHSSRSPback to top mRNA from alignment at H-akashiwo_Contig1248:290119..290793- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1248.4.1 ID=mRNA_H-akashiwo_Contig1248.4.1|Name=mRNA_H-akashiwo_Contig1248.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=675bp|location=Sequence derived from alignment at H-akashiwo_Contig1248:290119..290793- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1248:290119..290793- >mRNA_H-akashiwo_Contig1248.4.1 ID=mRNA_H-akashiwo_Contig1248.4.1|Name=mRNA_H-akashiwo_Contig1248.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=666bp|location=Sequence derived from alignment at H-akashiwo_Contig1248:290119..290793- (Heterosigma akashiwo CCMP452)back to top |