mRNA_H-akashiwo_Contig1246.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A6S9GRK8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GRK8_HETAK) HSP 1 Score: 442 bits (1138), Expect = 9.090e-156 Identity = 230/236 (97.46%), Postives = 231/236 (97.88%), Query Frame = 1
Query: 31 MLGSLQRIAGKGILLRAGLV-PGSALAVQYCRYFSQDKLVDESREILRQIVKPDGEVDLSRLSSEDSEEMYDDEYALFGVSPKTVERVRRPPSILKPQEITKEPKIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
MLG LQR AGKG LLRAGL+ PGSALAVQYCRYFSQDKLVDESREILRQIVKPDGEVDLSRLSSEDSEEMYDDEYALFGVSPKTVERVRRPPSILKPQEITKEPKIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLC VQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR
Sbjct: 1 MLGLLQRSAGKGTLLRAGLLLPGSALAVQYCRYFSQDKLVDESREILRQIVKPDGEVDLSRLSSEDSEEMYDDEYALFGVSPKTVERVRRPPSILKPQEITKEPKIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCTVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 236
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A7S3ZJV0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJV0_9STRA) HSP 1 Score: 173 bits (439), Expect = 4.410e-50 Identity = 88/140 (62.86%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 316 PQEITKEPKIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
PQ + +E D+ GR+Y TGRRK++ ARVW+ PG+G VN + M EYF RA H +V KPFLA+ TA FDV V GGGL+GQAGA+RLG++RAL+ Y+P +RP+LK GLLTRDARVVERKKPG+KKARK FQWVKR
Sbjct: 71 PQPLAREAVRDELGRAYATGRRKSSSARVWVFPGDGRVRVNGRNMVEYFKRATHVDEVIKPFLATKTACAFDVRATVAGGGLSGQAGAIRLGVARALQVYDPNHRPALKAAGLLTRDARVVERKKPGRKKARKAFQWVKR 210
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: F0YP22_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP22_AURAN) HSP 1 Score: 164 bits (414), Expect = 4.760e-47 Identity = 79/130 (60.77%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 346 DDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
DD GR+YGTGRRK + ARVW+ PG+G T+N K + +YF R H +V PF + TA FDV V+GGGL+GQAGAVR G++RAL+NY+P RP+LK G +TRD R+VERKKPG+KKARK FQWVKR
Sbjct: 27 DDLGRAYGTGRRKTSSARVWVLPGDGTVTINGKNLLDYFARRTHVDEVVAPFAVTRTACNFDVKATVKGGGLSGQAGAVRHGIARALQNYDPAYRPALKSAGFITRDPRMVERKKPGRKKARKAFQWVKR 156
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A2D9XQ14_9PROT (30S ribosomal protein S9 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D9XQ14_9PROT) HSP 1 Score: 164 bits (415), Expect = 7.310e-47 Identity = 85/135 (62.96%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 331 KEPKIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
KE DD GRSY TGRRK A+ARVWIKPG+G VN K YFGR H + +PFL +G +FDV+C V+GGGL+GQAGA+R G+SRALENY P RPSLK G+LTRDARVVERKK G KAR+ QW KR
Sbjct: 47 KESVKDDLGRSYATGRRKDAVARVWIKPGKGKVVVNGKEQENYFGRKTHLLIINQPFLITGRVGQFDVMCTVKGGGLSGQAGALRHGISRALENYEPDLRPSLKAAGMLTRDARVVERKKVGLHKARRSKQWAKR 181
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A7S2V4S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S8_9STRA) HSP 1 Score: 167 bits (422), Expect = 8.200e-47 Identity = 93/183 (50.82%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 232 EMYDDEYALFGVSPKTVERVRRPPSILKPQEITKEPKIDDQGRSYGTGRRKAAIARVWIKP-------GEG--------NFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
E Y EYALFG+SPKT+ V + P KP IT++PK GR YGTGRRK ++ARV++ P G+G VN KP+ + Q ++ KPF A+G+ +F++ C V+GGG +GQ GA+RLG++RAL+N+NP P L+ EGLLTRDAR+VERKKPGQKKARK+ QWVKR
Sbjct: 85 EEYPPEYALFGLSPKTMAEVDKVPPAPKPHVITRQPKQTPCGRYYGTGRRKTSVARVFLDPIPEDQEGGQGAAGEEPWAKMIVNRKPIWDRITNPVRQDELFKPFKATGSMGKFNLWCTVKGGGHSGQIGAIRLGIARALQNFNPQWTPLLRAEGLLTRDARMVERKKPGQKKARKKKQWVKR 267
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A651F7H2_9PROT (30S ribosomal protein S9 n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A651F7H2_9PROT) HSP 1 Score: 164 bits (414), Expect = 8.330e-47 Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 313 KPQEITKEPKIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
K + + EP ID GRSYGTGRRK A+ARVW+KPG G TVN + YF RA + + +PF G A +FDV+C V+GGGL+GQAGAVR G+SRAL N++P RP+LKK G+LTRD+RVVERKK G++KAR+ QW KR
Sbjct: 34 KTEVVKAEPVIDKYGRSYGTGRRKDAVARVWVKPGSGKVTVNGRDQEVYFARATQRLILNQPFGVIGNAGKFDVICTVKGGGLSGQAGAVRHGISRALINFDPEFRPALKKAGMLTRDSRVVERKKYGRRKARRGMQWAKR 174
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: K3XB57_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB57_GLOUD) HSP 1 Score: 167 bits (424), Expect = 1.710e-46 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 325 ITKEPKIDDQGRSYGTGRRKAAIARVWIK----PGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
+ + KID+QGR+YGTGRRK + ARVW+K P EG ++N K + +Y R H+ DV KPFL +FDV C V+GGGLTGQAGA+R G++RAL+N++P R LKKEGL+TRD R+VERKKPGQ KARK+FQWVKR
Sbjct: 180 VVRHRKIDEQGRAYGTGRRKTSTARVWVKKSEKPFEGRISINKKDLVDYLVRDTHREDVLKPFLVIDQMGQFDVYCTVKGGGLTGQAGAIRHGIARALQNFDPEYRAPLKKEGLITRDPRMVERKKPGQPKARKKFQWVKR 320
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A1W0A1D3_9STRA (30S ribosomal protein S9 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1D3_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.120e-46 Identity = 86/142 (60.56%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 322 EITKEPKIDDQGRSYGTGRRKAAIARVWIKP----GEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
+IT+ +ID+ GR+YGTGRRK + ARVWIKP G+G +N K M +YF R H+H++ PFL FDV+ V+GGGLTGQAGAVR G+SRALE +NP RP LKK G +TRD R+VERKKPGQKKARK+FQWVKR
Sbjct: 87 QITRVVEIDEFGRAYGTGRRKTSNARVWIKPAAEEGKGIIRINKKDMTDYFTRDTHRHELLLPFLEVKRLGDFDVMANVRGGGLTGQAGAVRHGISRALEKFNPDFRPPLKKAGFMTRDPRMVERKKPGQKKARKQFQWVKR 228
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A7S3NHT6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHT6_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.160e-46 Identity = 82/132 (62.12%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 340 KIDDQGRSYGTGRRKAAIARVWIKPGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
K+D+ GR+YGTG RK A+ARVWI PG G FTVNS + EYF R AH + +PF + T+ FDV +GGG +GQAGA+RLG++RAL+NYNP RP LK+ GLLTRD+R+VERKKPG KKARK QWVKR
Sbjct: 64 KVDELGRAYGTGGRKCAVARVWIYPGTGRFTVNSMSLIEYFPRIAHCEHIIEPFHCTETSCDFDVYSTTKGGGKSGQAGALRLGIARALQNYNPSFRPRLKQFGLLTRDSRIVERKKPGLKKARKAKQWVKR 195
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Match: A0A3R7JDC3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JDC3_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.900e-46 Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 325 ITKEPKIDDQGRSYGTGRRKAAIARVWIK----PGEGNFTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCAVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 735
I + K+D++GR+YGTGRRK + ARVW+K P G VN K + +YF R H+ +V KPF FDV C V+GGG+TGQAGAVR G++RAL+NY+P RP+LKK GL+TRD R+VERKKPGQKKARK+FQWVKR
Sbjct: 93 IVRVRKLDEKGRAYGTGRRKTSTARVWVKQSAEPFGGRIVVNKKDVVDYFVRDTHREEVLKPFSVIEKIGGFDVYCTVKGGGMTGQAGAVRHGIARALQNYDPEYRPALKKAGLMTRDPRMVERKKPGQKKARKKFQWVKR 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1246.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1246.4.1 >prot_H-akashiwo_Contig1246.4.1 ID=prot_H-akashiwo_Contig1246.4.1|Name=mRNA_H-akashiwo_Contig1246.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=236bp MLGSLQRIAGKGILLRAGLVPGSALAVQYCRYFSQDKLVDESREILRQIVback to top mRNA from alignment at H-akashiwo_Contig1246:212148..223167- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1246.4.1 ID=mRNA_H-akashiwo_Contig1246.4.1|Name=mRNA_H-akashiwo_Contig1246.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=11020bp|location=Sequence derived from alignment at H-akashiwo_Contig1246:212148..223167- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1246:212148..223167- >mRNA_H-akashiwo_Contig1246.4.1 ID=mRNA_H-akashiwo_Contig1246.4.1|Name=mRNA_H-akashiwo_Contig1246.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=708bp|location=Sequence derived from alignment at H-akashiwo_Contig1246:212148..223167- (Heterosigma akashiwo CCMP452)back to top |