mRNA_H-akashiwo_Contig1245.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1245.1.1
Unique NamemRNA_H-akashiwo_Contig1245.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: A0A0M0KCG1_9EUKA (Ubiquitin conjugating enzyme 2 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KCG1_9EUKA)

HSP 1 Score: 225 bits (574), Expect = 1.710e-65
Identity = 143/348 (41.09%), Postives = 193/348 (55.46%), Query Frame = 1
Query:    1 HVIIGGALGKGIVWRLLG-QRYGFKPLANYRRGFKCICRKG---AFLKTLRAYCAA-YETRLP---------------EFVPVSYLFYP------KNMLQSELEGFANDYYSRGEEEDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRL--ASGPV-ADCWVVQKYIERPLLLPGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQEHHPAYGTWDHEPTNELFYAGFD----RFLRESGAAARGVTLRRYILPQVEYIAVHTLLT--PASRAAGRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            H+++G A GKGI W     +  G  PL NY  GF+ + RK    A L+   A C   + T +P               E +P S+ FYP      +    S    FA    + G    NVWI+KP+ G KG  I   + +N+I+ FL E+ +  A G V A  WVVQ+YI  PLLL G RKFD+RCWVLL+ +Y++++Y +GV RT +VP+ + DL++ FAHL+NHCI E H A+G +  EP NELFYA  D      L +  AAA G  L   ILPQV  I V TLL   P  ++A    + AF L G+DF++D   +VWL EVN+SPAVA+ L   L   L+   +
Sbjct:   64 HLLLGTAQGKGIPWEYHQCKSTGGPPLVNYYYGFETLTRKADLVAMLQNSEATCGGNWPTHMPVRLMAPVCVPGHLVWELLPKSFAFYPDRGITHQRFRSSFFAAFAAAERAHGSLH-NVWIVKPSNGCKGERIFLSSSYNEIVQFLMEEAMHAAYGEVIASAWVVQRYIHNPLLLRGGRKFDLRCWVLLDADYNVWLYQQGVARTAAVPYDIHDLANYFAHLTNHCIAETHAAFGAY--EPNNELFYASLDAELSHALPQCAAAAGGSVLYGRILPQVRRIVVQTLLAARPTLQSADD-DYYAFQLLGYDFVIDCDLRVWLCEVNASPAVASALLPGLVHALIRRAI 407          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: A0A8J1ULI0_OWEFU (Ofus.G15480 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1ULI0_OWEFU)

HSP 1 Score: 214 bits (545), Expect = 1.660e-63
Identity = 119/317 (37.54%), Postives = 177/317 (55.84%), Query Frame = 1
Query:   49 LGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYP-------------KNMLQS-----ELEGFANDYYSRGEEEDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLLPGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQEHHPA-YGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASR-AAGRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            LG   G   + NY RG   +CRK   + TL+ YC+     LPE+VP S++ YP             K  ++S     E E F   +     +  N+WI+K + G+KG  I+      ++LS+++    A        V+QKYI+ PLLL G+RKFD+RCWVL++ N++IY+Y EGV RT S P++L DL+D   HL+NHC+QE   + YG++  EP NE+FY  FDR+L++         +   ILPQ++ I          + +     + +F LFGFDFMLD+  KVWL+E+N SPA A+ L + L   L++  +
Sbjct:   56 LGHSAGLTQVVNYYRGSGSLCRKTTLVSTLKKYCSTDGNELPEWVPPSFIIYPPGDTPSDKEALTLKEHVKSAKRKDEREDFLKKFQEYNGDVQNIWIVKSSSGAKGEGILISKQAEELLSYVDRHSQAH-------VIQKYIDEPLLLEGNRKFDIRCWVLVDTNFEIYLYKEGVLRTSSDPYNLGDLNDVTCHLTNHCLQEQLSSHYGSY--EPGNEMFYKEFDRYLQDK----YNTRMSDSILPQIKAIVRQCFQAVEQQISTSDLNYKSFQLFGFDFMLDSNLKVWLLEINGSPASASALLSDLAEGLIQTAI 359          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: A0A091D917_FUKDA (Tubulin--tyrosine ligase n=1 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091D917_FUKDA)

HSP 1 Score: 212 bits (540), Expect = 1.710e-62
Identity = 129/331 (38.97%), Postives = 186/331 (56.19%), Query Frame = 1
Query:   13 GGALGKGIVWRLLGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYPKNMLQ------------------SELEGFANDYYSRGEE-EDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLL-PGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQ-EHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASRAAGR-APHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            G  LGK  +W+ LG   G   L NY RG   +CRK + +K ++      E+    + P SY+ YP N+                     E E F   Y  + E+ E N+WI K + G+KG  I+  ++ +++L F++ Q    G V    V+QKY+E PLLL PG RKFD+R WVL++H Y+IY+Y EGV RT S P+ +D+  D+  HL+NHCIQ E+   YG +  E  NE+F+  F+++L     +A  +TL   IL Q+++I    LL+     + R  P+ +F LFGFDFM+D   KVWLIEVN +PA A  L A LC  +V+L +
Sbjct:   68 GSLLGK--LWKTLGHEPGLLQLVNYYRGADKLCRKASLVKLIKTSPELAESYT--WFPESYVIYPTNLKTPVAPAQNGIQPPVSNSRTDEREFFLASYNKKKEDGEGNIWIAKSSAGAKGEGILISSESSELLDFIDNQ----GQVH---VIQKYLEHPLLLEPGHRKFDIRSWVLVDHQYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGKY--EEGNEMFFEEFNQYLM----SALNITLEASILQQIKHIIRSCLLSVEPAISTRYLPYQSFQLFGFDFMVDEELKVWLIEVNGAPACAQKLYAELCQGIVDLAI 381          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: A0A7S1CPQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPQ2_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.590e-62
Identity = 119/276 (43.12%), Postives = 161/276 (58.33%), Query Frame = 1
Query:   43 RLLGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYPKNMLQSELEGFANDYYSRGEEED-NVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLLPGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQEHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASRAAGRAP---HTAFNLFGFDFMLDARHKVW 858
            R  G   G  PL N+ + FK +  K   ++ LRA+       L + +P S+LFY  +M  SE   F + +    E  D NVWI+KP+ G KG  I  M++   I   L E+    G   + WVVQKY+ERP+LL G RKFDMRCWVL+  +Y +Y+Y +GV RT SV +SLD L D F HLSNHCIQ  HP YG +  EPTNE++Y  F+ +LR+S      V   R I+PQ+  + V   L  A +   +AP   + +F+LFG+DFM+D   KVW
Sbjct:   13 RAAGGGRGAGPLCNFTKRFKQLTWKVDMVECLRAHARREGLDLWKMIPESFLFYGGDMEASERRQFLDAFVRHAEAGDRNVWIVKPSGGGKGGRIQVMDNLRDIGYLLSEEL---GTPGNDWVVQKYLERPMLLRGGRKFDMRCWVLVTPDYKVYLYRQGVLRTGSVRYSLDRLDDTFVHLSNHCIQVKHPEYGKY--EPTNEMWYPEFEAWLRDSAFPDGAVQFERDIVPQLRAL-VMVSLQAARKFLQQAPGCGYRSFHLFGYDFMVDDAGKVW 282          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: UPI001B88D456 (tubulin--tyrosine ligase-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D456)

HSP 1 Score: 210 bits (535), Expect = 4.770e-62
Identity = 127/316 (40.19%), Postives = 172/316 (54.43%), Query Frame = 1
Query:   49 LGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYPKNML-----------------QSELEGFANDYYSRGEEEDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLLPGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQEHH-PAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTL-LTPASRAAGRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            LGQ  G   L NY RG   ICRK   +KTL+ YC      L E++PVSY+ YPK+                   ++EL G    + S G  +D +WI K T GSKG  I    D +++L+ ++ Q+ A       +V+Q+YI+ PLLL G RKFD+RCWVLL+  Y IY+Y EGV RT S  +SLD L D  AHL+NH +QE   P +G +  E  NE+FY  FDR+L++       +T+   +LPQ++ +    L +           +  F LFGFDFM+D   KVWL+E+N  PA A     RL  DLV   V
Sbjct:   56 LGQVRGLSQLVNYYRGSSVICRKVLMIKTLKQYCTTSNVPLFEWLPVSYIIYPKSRECQVSTSIPVTRPPQLDERNELLGIDKSFKSSG--KDVIWISKITAGSKGEGINISRDVDELLNEIDSQKSA-------YVIQQYIDPPLLLEGGRKFDIRCWVLLDAEYSIYLYREGVLRTASELYSLDHLGDVTAHLTNHNLQEERSPNFGKY--EDGNEMFYDQFDRYLQDK----YNITMETTLLPQIKQVIKSCLGIIKEQINTDGLDYKCFQLFGFDFMVDENFKVWLLEINGGPACAQ----RLLPDLVRCLV 352          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: A0A340WC01_LIPVE (tubulin--tyrosine ligase n=24 Tax=Boreoeutheria TaxID=1437010 RepID=A0A340WC01_LIPVE)

HSP 1 Score: 210 bits (535), Expect = 4.900e-62
Identity = 129/319 (40.44%), Postives = 183/319 (57.37%), Query Frame = 1
Query:   49 LGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYPKNM--------------LQS----ELEGFANDYYSRGEE-EDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLL-PGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQ-EHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASRAAGR-APHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            LG   G   L NY RG   +CRK + +K ++      E+    + P SY+ YP N+              +QS    E E F   Y  + E+ E NVWI K + G+KG  I+  +D  ++L F++ Q    G V    V+QKY+ERPLLL PG RKFD+R WVL++H Y+IY+Y EGV RT S P+ +D+L D+  HL+NHCIQ E+   YG +  E  NE+F+  F+R+L     +A  +TL   IL Q+++I    L++     + R  P+ +F LFGFDFM+D   KVWLIEVN +PA A  L A LC  +V++ +
Sbjct:   52 LGHEPGLMQLVNYYRGADKLCRKASLVKLVKTSPELAESCA--WFPESYVIYPNNLKTPVAPAQNGIHPPIQSSRTDEREFFLASYNRKKEDGEGNVWIAKSSAGAKGEGILISSDAAELLDFIDNQ----GQVH---VIQKYLERPLLLEPGHRKFDIRSWVLVDHQYNIYLYREGVLRTASEPYHVDNLQDKTCHLTNHCIQKEYSKNYGKY--EEGNEMFFEEFNRYL----TSALNITLESSILLQIKHIIRSCLMSVEPAISTRHLPYQSFQLFGFDFMVDEEMKVWLIEVNGAPACAQKLYAELCQGIVDIAI 355          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: UPI001CFB2D89 (tubulin--tyrosine ligase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB2D89)

HSP 1 Score: 210 bits (535), Expect = 4.900e-62
Identity = 131/319 (41.07%), Postives = 179/319 (56.11%), Query Frame = 1
Query:   49 LGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYP----------KNMLQ--------SELEGFANDYYSRGE-EEDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLL-PGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQ-EHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLT-PASRAAGRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            LG   G   L NY RG   +CRK + +K ++      E+    + P SY+ YP          +N LQ         E E F   Y  R E ++DNVWI K + G+KG  I+  +D  ++L F++ Q    G V    V+QKY+E+PLLL PG RKFD+R WVLL+H Y+IY+Y EGV RT S P++  +L D+  HL+NHCIQ EH   YG +  E  NE+F+  F+++L  S      VTL   ILPQ++ I    LL    S +    P+ +F LFGFDFM+D   KVWLIEVN +PA A  L A LC  ++ + +
Sbjct:   52 LGHEPGLVQLVNYYRGADKLCRKASLVKLIKTSPDLSESCT--WFPESYVIYPNDLKTPMAPTQNGLQLPVSSTRTDEREVFLTSYNKRKEPDQDNVWIAKSSAGAKGEGILISSDAAELLDFIDNQ----GQVH---VIQKYLEKPLLLEPGHRKFDIRSWVLLDHQYNIYLYKEGVLRTSSEPYNSTNLQDKICHLTNHCIQKEHSKNYGRY--EEGNEMFFDDFNQYLINS----HNVTLESSILPQIKQIIRSCLLCIEPSISTKSLPYQSFQLFGFDFMVDEEMKVWLIEVNGAPACAQKLYAELCQGIISIAI 355          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: A0A1S3IKC1_LINUN (tubulin--tyrosine ligase isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IKC1_LINUN)

HSP 1 Score: 209 bits (533), Expect = 1.880e-61
Identity = 126/326 (38.65%), Postives = 176/326 (53.99%), Query Frame = 1
Query:   31 GIVWRLLGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYP----KNMLQSELEGFA---------------NDYYSRGEEEDN--VWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLLPGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQEHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASR--AAGRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            G+ +  LG   GF  + NY RG  C+CRK + + TL            E++P S++ YP    +   QS+L+ F                  Y+ R   E    +WI+K   G+KG+ ++  +D  +IL F + +  A        +VQKY+E+PLLL GDRKFD+R WVL++  +DIY+Y EGV RT S P++  DL+D  +HL+NHC+QEH   YG +  E  NELF+  F+R+L+        VTL   ILPQ+E I +            AG A + +F LFGFDFM+D   KVWLIEVN SPA A  L   L   L++  V
Sbjct:   61 GLPYGRLGHEPGFVQIVNYYRGSGCLCRKTSMVSTLCKQWKETGQEPFEWLPPSFILYPNITPEQEEQSDLKSFIAQKKRSIKTDEREEFKQYFERVRSEGKGCIWIVKSAAGAKGQGVLISSDVEEILHFTDSKSQAH-------IVQKYLEKPLLLSGDRKFDIRSWVLVDTQFDIYLYKEGVLRTSSEPYNATDLTDLTSHLTNHCLQEHSQNYGKY--EEGNELFFDEFNRYLQSQ----HSVTLSASILPQIENIILECFKACKEHLSTAGFA-YKSFQLFGFDFMIDEAFKVWLIEVNGSPACAKKLLPSLAESLIQTAV 372          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: UPI0018F563E5 (tubulin--tyrosine ligase n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F563E5)

HSP 1 Score: 207 bits (526), Expect = 5.950e-61
Identity = 125/323 (38.70%), Postives = 177/323 (54.80%), Query Frame = 1
Query:   40 WRLLGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYP------------------KNMLQSELEGFANDYYSRGEE-EDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLL-PGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQ-EHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASRAAGRA--PHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            W   G   G   L NY RG   +CRK + +K ++      E+    + P SY+ YP                   N+   + E F   Y+ R E  E NVWI K + G+KG  I   +D N+++ +++ Q    G V    V+QKY+ERPLLL PG RKFD+R WVLL+H Y+IY+Y EGV RT S P++  D  D+ +HL+NHCIQ E+   YG +  E  NE+F+  F+++L  +      V L   +LPQ++ I + + L     A G    P+ +F LFGFDFM+D   KVWLIEVN +PA A  L A LC  +V++ +
Sbjct:   25 WLFTGHEPGLAQLVNYYRGADKLCRKASLVKLIKTIPELMESCT--WFPESYVIYPMGLQTTVIPVKNGIKAQRNNVRTDDREAFLASYHKRLENGESNVWIAKSSAGAKGTGIFISSDANELMDYIDNQ----GQVH---VIQKYLERPLLLEPGHRKFDIRSWVLLDHQYNIYLYKEGVLRTSSDPYNSTDFQDKTSHLTNHCIQKEYSKNYGKY--EEGNEMFFEEFNQYLMNT----HSVNLENSVLPQIKQI-IRSCLMCIEPAIGTKLLPYHSFQLFGFDFMVDEDLKVWLIEVNGAPACAQKLYAELCQGIVDVAI 331          
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Match: UPI0003F0C1F8 (tubulin--tyrosine ligase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0C1F8)

HSP 1 Score: 207 bits (528), Expect = 6.040e-61
Identity = 123/321 (38.32%), Postives = 181/321 (56.39%), Query Frame = 1
Query:   49 LGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYCAAYETRLPEFVPVSYLFYPK---------NMLQS-----------ELEGFANDYYSRGE-EEDNVWILKPTKGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLLPGDRKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQEH-HPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIAVHTLLTPASRAA--GRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADLNARLCADLVELTV 939
            LG   G  PL NY RG   +CRK A +KTL+ YC+       + +P +Y  YPK         N L++           E E F   Y+   E ++ +VWI K T G+KG  I+  ++  Q++ +++EQ+ +        V+QKY+E+PLLL GDRKFD+RCWVLL+H Y+IY+Y EGV RT S P+   D SD   HL+NHC+QE   P +G +  E  NE+F+  F+ +L++         +   ++PQ++ I   +L +     +  G + H+ F LFGFDFM+D+  KVWLIEVN SPA A  L   L + +V + +
Sbjct:   53 LGHGQGMNPLVNYYRGSGRLCRKTALVKTLQEYCSNCNKDPFQIIPPTYYLYPKIADVPMESGNSLKAVKMRSMQNKTDEREAFMKCYHKMKENKQGDVWIAKSTSGAKGEGILISDNPQQLIDYIDEQKQSH-------VIQKYLEKPLLLNGDRKFDIRCWVLLDHQYNIYLYKEGVLRTASDPYKPQDYSDTTGHLTNHCLQEALSPNFGKY--EIGNEMFFDEFNSYLQDRYQTE----MEESLIPQIKEIIKESLYSVQVHISTEGLSYHS-FQLFGFDFMVDSDFKVWLIEVNGSPASAEKLLPGLSSAIVTVAI 359          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1245.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M0KCG1_9EUKA1.710e-6541.09Ubiquitin conjugating enzyme 2 (Fragment) n=1 Tax=... [more]
A0A8J1ULI0_OWEFU1.660e-6337.54Ofus.G15480 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A091D917_FUKDA1.710e-6238.97Tubulin--tyrosine ligase n=1 Tax=Fukomys damarensi... [more]
A0A7S1CPQ2_9STRA2.590e-6243.12Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI001B88D4564.770e-6240.19tubulin--tyrosine ligase-like n=1 Tax=Gigantopelta... [more]
A0A340WC01_LIPVE4.900e-6240.44tubulin--tyrosine ligase n=24 Tax=Boreoeutheria Ta... [more]
UPI001CFB2D894.900e-6241.07tubulin--tyrosine ligase n=1 Tax=Protopterus annec... [more]
A0A1S3IKC1_LINUN1.880e-6138.65tubulin--tyrosine ligase isoform X1 n=2 Tax=Lingul... [more]
UPI0018F563E55.950e-6138.70tubulin--tyrosine ligase n=1 Tax=Scyliorhinus cani... [more]
UPI0003F0C1F86.040e-6138.32tubulin--tyrosine ligase-like n=1 Tax=Saccoglossus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1245contigH-akashiwo_Contig1245:58764..60036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog29078.XP_008159010.1
Preferred nameTTL
PFAMsTTL
Model size939
Max annot lvl33208|Metazoa
KEGG koko:K06047
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001558,GO:0003674,GO:0003824,GO:0004835,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005874,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007275,GO:0007346,GO:0007399,GO:0008150,GO:0008152,GO:0008361,GO:0009987,GO:0010564,GO:0010769,GO:0010975,GO:0015630,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0018166,GO:0018193,GO:0018212,GO:0018322,GO:0018410,GO:0019538,GO:0022008,GO:0022603,GO:0022604,GO:0030154,GO:0030516,GO:0031344,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0036211,GO:0040008,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045664,GO:0045787,GO:0045931,GO:0048518,GO:0048522,GO:0048638,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050770,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051239,GO:0051726,GO:0051960,GO:0051983,GO:0060284,GO:0060341,GO:0061387,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0090066,GO:0090235,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120035,GO:0140096,GO:1901564,GO:2000026
Exons2
Evalue4.04e-63
EggNOG OGsKOG2157@1|root,KOG2157@2759|Eukaryota,39TBC@33154|Opisthokonta,3BGBF@33208|Metazoa,3CWBD@33213|Bilateria,47ZQV@7711|Chordata,496BZ@7742|Vertebrata,3J7JP@40674|Mammalia,4KVEN@9397|Chiroptera
EC6.3.2.25
DescriptionTubulin-tyrosine ligase family
Cds size939
COG categoryO
BRITEko00000,ko01000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387130.713529-CDS-H-akashiwo_Contig1245:58763..594981681387130.713529-CDS-H-akashiwo_Contig1245:58763..59498Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1245 58764..59498 +
1681387130.7236464-CDS-H-akashiwo_Contig1245:59832..600361681387130.7236464-CDS-H-akashiwo_Contig1245:59832..60036Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1245 59833..60036 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1245.1.1prot_H-akashiwo_Contig1245.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1245 58764..60036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1245.1.1

>prot_H-akashiwo_Contig1245.1.1 ID=prot_H-akashiwo_Contig1245.1.1|Name=mRNA_H-akashiwo_Contig1245.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=313bp
HVIIGGALGKGIVWRLLGQRYGFKPLANYRRGFKCICRKGAFLKTLRAYC
AAYETRLPEFVPVSYLFYPKNMLQSELEGFANDYYSRGEEEDNVWILKPT
KGSKGRDIVCMNDFNQILSFLEEQRLASGPVADCWVVQKYIERPLLLPGD
RKFDMRCWVLLNHNYDIYIYTEGVFRTCSVPFSLDDLSDQFAHLSNHCIQ
EHHPAYGTWDHEPTNELFYAGFDRFLRESGAAARGVTLRRYILPQVEYIA
VHTLLTPASRAAGRAPHTAFNLFGFDFMLDARHKVWLIEVNSSPAVAADL
NARLCADLVELTV
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mRNA from alignment at H-akashiwo_Contig1245:58764..60036+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1245.1.1 ID=mRNA_H-akashiwo_Contig1245.1.1|Name=mRNA_H-akashiwo_Contig1245.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1273bp|location=Sequence derived from alignment at H-akashiwo_Contig1245:58764..60036+ (Heterosigma akashiwo CCMP452)
CACGTGATCATCGGAGGTGCTCTTGGGAAAGGAATAGTGTGGCGCCTCCT CGGTCAGCGGTACGGCTTCAAACCTCTTGCAAATTATCGCCGTGGATTCA AGTGCATTTGCCGCAAGGGAGCCTTCTTGAAAACCCTACGGGCATACTGT GCGGCCTATGAAACGCGCCTACCTGAATTTGTCCCTGTGTCATATTTATT TTATCCAAAGAATATGCTGCAGAGCGAGCTGGAGGGTTTTGCGAATGACT ATTATTCGCGAGGGGAGGAGGAGGACAATGTGTGGATCCTGAAGCCGACC AAGGGCAGCAAAGGACGGGACATTGTCTGCATGAACGACTTCAACCAGAT CCTGAGCTTTCTCGAGGAACAGCGCTTGGCGAGCGGTCCCGTTGCGGACT GCTGGGTGGTCCAGAAATACATCGAGCGCCCGCTGCTGCTGCCCGGGGAC CGCAAGTTTGACATGCGCTGCTGGGTGCTGCTGAACCACAACTACGACAT TTACATCTACACGGAGGGCGTCTTCCGCACGTGCTCGGTGCCGTTCTCCC TGGACGACCTGAGCGACCAGTTTGCCCACCTGAGCAACCACTGCATCCAG GAGCACCACCCGGCCTATGGCACCTGGGACCACGAGCCCACGAACGAGCT CTTCTACGCGGGGTTCGACCGGTTCCTGCGCGAGAGCGGGGCGGCCGCCC GCGGGGTCACGCTGCGCCGGTACATCCTGCCCCAGGTGAGGGGGCCAGGG AGGGAGAGCTGAGAGAGAGGGCGGCGAGGTGGACGGGGGAGAGGGCCAGG GCGGGCGGGCGCCTCTTGCAAGGCTGGCTGGGCACGACCAAAAGGATGTT ACCGCCGGCCTAGCGGCTGCCGCCTGTGCTTCATAATTCCTAACAGCGTT GGCTGCTCTTGCCAAATGGACAACGTGCTGAGGAATTGGACCGGCAAAAC ATTTGCATGCGCGAAAAAATCGCCATCGCCCCTCGATAGTGACTTGTTCT CCAGCATTCGCCCTCTGATCGCACCCCCAAGCTCCACACACACCCTGCCA CCGCCGCCCTCCTTCCTAGGTGGAGTATATTGCGGTGCACACGCTGCTAA CGCCCGCGAGCCGAGCCGCCGGCCGGGCGCCGCACACGGCCTTCAACCTG TTCGGGTTCGACTTCATGCTGGACGCCCGGCACAAGGTGTGGCTCATCGA GGTGAACAGCAGCCCGGCCGTGGCCGCCGATCTCAACGCGCGGCTGTGCG CCGATCTGGTGGAGCTGACCGTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1245:58764..60036+

>mRNA_H-akashiwo_Contig1245.1.1 ID=mRNA_H-akashiwo_Contig1245.1.1|Name=mRNA_H-akashiwo_Contig1245.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1245:58764..60036+ (Heterosigma akashiwo CCMP452)
CACGTGATCATCGGAGGTGCTCTTGGGAAAGGAATAGTGTGGCGCCTCCT
CGGTCAGCGGTACGGCTTCAAACCTCTTGCAAATTATCGCCGTGGATTCA
AGTGCATTTGCCGCAAGGGAGCCTTCTTGAAAACCCTACGGGCATACTGT
GCGGCCTATGAAACGCGCCTACCTGAATTTGTCCCTGTGTCATATTTATT
TTATCCAAAGAATATGCTGCAGAGCGAGCTGGAGGGTTTTGCGAATGACT
ATTATTCGCGAGGGGAGGAGGAGGACAATGTGTGGATCCTGAAGCCGACC
AAGGGCAGCAAAGGACGGGACATTGTCTGCATGAACGACTTCAACCAGAT
CCTGAGCTTTCTCGAGGAACAGCGCTTGGCGAGCGGTCCCGTTGCGGACT
GCTGGGTGGTCCAGAAATACATCGAGCGCCCGCTGCTGCTGCCCGGGGAC
CGCAAGTTTGACATGCGCTGCTGGGTGCTGCTGAACCACAACTACGACAT
TTACATCTACACGGAGGGCGTCTTCCGCACGTGCTCGGTGCCGTTCTCCC
TGGACGACCTGAGCGACCAGTTTGCCCACCTGAGCAACCACTGCATCCAG
GAGCACCACCCGGCCTATGGCACCTGGGACCACGAGCCCACGAACGAGCT
CTTCTACGCGGGGTTCGACCGGTTCCTGCGCGAGAGCGGGGCGGCCGCCC
GCGGGGTCACGCTGCGCCGGTACATCCTGCCCCAGGTGGAGTATATTGCG
GTGCACACGCTGCTAACGCCCGCGAGCCGAGCCGCCGGCCGGGCGCCGCA
CACGGCCTTCAACCTGTTCGGGTTCGACTTCATGCTGGACGCCCGGCACA
AGGTGTGGCTCATCGAGGTGAACAGCAGCCCGGCCGTGGCCGCCGATCTC
AACGCGCGGCTGTGCGCCGATCTGGTGGAGCTGACCGTG
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