mRNA_H-akashiwo_Contig1244.7.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7R9WAW6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WAW6_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.080e-31 Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 37 PPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
PPGSAH AF +G L +LGG +GY +KGSKAS+ A L+I SG++I+ + EGH LA TS L+ALGMG R K+GKFMPAGLVA +GA S AY KKT EW
Sbjct: 3 PPGSAHPAFGLGALTILGGAVGYFRKGSKASLGAGLLFGSLLIGSGIMISGESQYEGHALASGTSGLMALGMGQRFAKTGKFMPAGLVAAMGAVSLAYHTKKTIEW 108
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7S2EKC3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKC3_TRICV) HSP 1 Score: 117 bits (294), Expect = 8.640e-31 Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 37 PPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
PPGSAH AF +GGL +LGG +GY +KGSKAS+ A ++I SG++I+ EGH LA S L+ALGMG R ++SGKFMP+GLVA +GAAS AY K EW
Sbjct: 3 PPGSAHPAFGLGGLTILGGAVGYFRKGSKASLGAGLAFGSILIGSGVMISGEKQFEGHSLAAGASGLMALGMGQRFVQSGKFMPSGLVAALGAASLAYHTGKALEW 108
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7S0FT96_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FT96_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.560e-29 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 37 PPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
PPGSAH +G L ++GG +G+ +KGSKAS+IA G L+I SG+LI+ + EGH LA TS ++ LGMG R +KSGKFMP+GL+AV+GA S A+ K EW
Sbjct: 3 PPGSAHPVLGLGLLTIIGGTVGFARKGSKASLIAGVGFGGLLIGSGVLISGEHQYEGHVLASVTSGVMGLGMGQRFLKSGKFMPSGLIAVLGAGSCAFNVMKAMEW 108
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7S2NSL1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSL1_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.240e-28 Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 28 MEKPPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
M PGSAH F +G +V GG+ G+V+KGSKAS+ A L+I+SG+LI + LEGH LA +TS+L++LGMG R +K+GKFMP GLVA +GA S AY KK W
Sbjct: 1 MSNIPGSAHPCFGLGVVVASGGIAGFVRKGSKASLGAGVLFGGLLISSGMLIVQDKHLEGHALAASTSALMSLGMGQRYIKTGKFMPGGLVAALGAVSVAYHMKKVLIW 109
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A1Z5JIY8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIY8_FISSO) HSP 1 Score: 111 bits (277), Expect = 4.340e-28 Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 28 MEKPPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDL-EGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
M K PGSAH ++GGLV+ GG++GYVKKGS+ S+I+ L++ SG LI K + + EGH LA TSS+LAL MG R M +GKFMPAGLVA +G + AY K+ EW
Sbjct: 1 MSKIPGSAHVNLSLGGLVLAGGIVGYVKKGSRMSLISGITVGSLLLGSGYLIAKTDQVYEGHVLATTTSSILALAMGQRFMATGKFMPAGLVAALGVGACAYNYHKSKEW 110
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7S2GSC4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSC4_9STRA) HSP 1 Score: 110 bits (276), Expect = 9.170e-28 Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 28 MEKPPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
M+ PGSAH F++GGLV+LGGV G+ +KGSKAS+IA L++ G +I+ + EGH LA S L+ALGMG R + + KFMPAG+VAV+GAA AY K EW
Sbjct: 21 MKNIPGSAHMNFSLGGLVILGGVAGFARKGSKASLIAGLTFGSLLLGGGYMISNDKEYEGHALATGASGLMALGMGQRFVSTQKFMPAGMVAVLGAACCAYNFNKAQEW 129
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7S2VBD1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VBD1_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.500e-27 Identity = 57/110 (51.82%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 28 MEKPPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGN-DLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
M K PGSAH ++GGL+M+GG +GY+KK S AS++A G L+I S LI K + E H LA AT+ +LAL MG R + KFMPAG+VA++GAA AY A K EW
Sbjct: 1 MSKIPGSAHLNLSLGGLIMVGGAMGYIKKRSTASLVAGFGVGSLLIGSSYLIAKTDKQFEAHALATATTGVLALAMGQRYLGGAKFMPAGMVAILGAAGCAYNASKALEW 110
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: K0RGB1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RGB1_THAOC) HSP 1 Score: 106 bits (265), Expect = 2.130e-26 Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 40 PGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEWMD 360
PGSAHAA + G L + GG++GYVKKGSK S+ A L++ SG++I+ EGH LA TS +AL +G+R +K+ KFMPAGL++ I S AY KK EW D
Sbjct: 6 PGSAHAALSFGALTIGGGILGYVKKGSKPSLGAGVVCGSLLVASGMMISGEKQFEGHSLAAGTSGAMALALGSRFIKTEKFMPAGLISAISVTSLAYHTKKALEWKD 112
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A6U3W9Y0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3W9Y0_9STRA) HSP 1 Score: 107 bits (267), Expect = 4.600e-26 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 28 MEKPPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
M K PGSAH F++GGL++LGG +GY KKGSKAS++A LI + EGH LA T+ L+ALGMG R + + KFMPAG+VAV+GAA AY K EW
Sbjct: 50 MSKIPGSAHMNFSLGGLIILGGAMGYAKKGSKASLLAGLTFGXXXXXXXYLIANDKEYEGHALATGTAGLMALGMGQRFVSTQKFMPAGMVAVLGAACCAYNFNKAREW 158
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Match: A0A7S0QC17_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QC17_9CRYP) HSP 1 Score: 105 bits (261), Expect = 8.760e-26 Identity = 56/104 (53.85%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 43 GSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLLITKGNDLEGHGLALATSSLLALGMGARVMKSGKFMPAGLVAVIGAASAAYQAKKTFEW 354
GS H +F + L++ GG +V+KGSK S++A G L SGLLI G EGHGLAL +S LL GM R +K+GKFMPAGLVA +GA SA YQ KK EW
Sbjct: 9 GSEHMSFTMAALLVSGGTYAFVRKGSKMSLVAGCGVGALFAGSGLLIKAGQHKEGHGLALVSSLLLLGGMAPRAVKTGKFMPAGLVASLGALSALYQGKKVQEW 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1244.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1244.7.1 >prot_H-akashiwo_Contig1244.7.1 ID=prot_H-akashiwo_Contig1244.7.1|Name=mRNA_H-akashiwo_Contig1244.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=112bp MEKPPGSAHAAFAVGGLVMLGGVIGYVKKGSKASVIASGGTAMLMITSGLback to top mRNA from alignment at H-akashiwo_Contig1244:203039..205341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1244.7.1 ID=mRNA_H-akashiwo_Contig1244.7.1|Name=mRNA_H-akashiwo_Contig1244.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2303bp|location=Sequence derived from alignment at H-akashiwo_Contig1244:203039..205341+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1244:203039..205341+ >mRNA_H-akashiwo_Contig1244.7.1 ID=mRNA_H-akashiwo_Contig1244.7.1|Name=mRNA_H-akashiwo_Contig1244.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=336bp|location=Sequence derived from alignment at H-akashiwo_Contig1244:203039..205341+ (Heterosigma akashiwo CCMP452)back to top |