mRNA_H-akashiwo_Contig1244.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: Q07S70_RHOP5 (Globin n=1 Tax=Rhodopseudomonas palustris (strain BisA53) TaxID=316055 RepID=Q07S70_RHOP5) HSP 1 Score: 59.7 bits (143), Expect = 6.480e-9 Identity = 33/110 (30.00%), Postives = 51/110 (46.36%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTAVQQ 345
F+ F+ P R LF G + + KL+ +G ++S + LA H GV P+ YAP L T++K +GD WT + +WTA ++ M+ A Q
Sbjct: 27 FYGKLFDIAPEVRALFKGDIAEQGKKLMGTLGVVVSGLTDLDAILPAASRLARHHVSYGVKPSHYAPVGAALLWTLEKGLGDEWTPDLAEAWTAAYGTLSGYMIEQAYGQ 136
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: UPI001EDF804C (globin domain-containing protein n=1 Tax=Yoonia sp. I 8.24 TaxID=1537229 RepID=UPI001EDF804C) HSP 1 Score: 54.3 bits (129), Expect = 7.440e-7 Identity = 32/110 (29.09%), Postives = 52/110 (47.27%), Query Frame = 1
Query: 7 SDDFFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTA 336
+D F+ FE P R +F G + + KL+ M+G++++ + E LA H GV Y L T+ +GD +T E E +WTA +++ +MV A
Sbjct: 24 ADIFYTRLFEVAPQVRPMFKGDIAEQGSKLMAMMGTVVNGLRDLDKIIPVAEALAVKHIDYGVKAEHYDTVGASLLYTLNAGLGDDFTAEVEEAWTAAYTTLAGVMVNAA 133
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: A0A848RX62_9MICO (Hemin receptor n=1 Tax=Planctomonas sp. JC2975 TaxID=2729626 RepID=A0A848RX62_9MICO) HSP 1 Score: 54.3 bits (129), Expect = 7.570e-7 Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTAVQQ 345
F+ F+ P+ R LF + + + KL+ M+G ++ ++ ++ + L A H GV P Y L T+ K +GD +T E E +WTA +++ M+ A +
Sbjct: 27 FYDELFQRDPSLRPLFTEDMTEQRKKLMTMLGMAVNGLKNWDSTQRVVANLGARHVGYGVKPEYYPTVGAALLATLSKGLGDDFTPEVEEAWTAAYTALSGTMIEAAADK 136
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: UPI0012E27B3D (globin domain-containing protein n=1 Tax=Oceanobacillus sp. HTM 045 TaxID=2676312 RepID=UPI0012E27B3D) HSP 1 Score: 53.1 bits (126), Expect = 2.050e-6 Identity = 31/105 (29.52%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLF-NGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMV 327
F+ FE P R LF N ++ Q KL + + +++ S A L + A H GV + Y F+ + T+++R+G+ WT E ++WTA I+ + M+
Sbjct: 27 FYERLFEVDPDTRRLFENTEMPVQQTKLARALETIVRSAGDAEGMASRLRAMGARHTGYGVDGSHYYSFASAMLWTLEQRLGEAWTPEMRDAWTAAIAGAVGAMM 131
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: A0A1C4XVE3_MICVI (Flavohemoprotein n=1 Tax=Micromonospora viridifaciens TaxID=1881 RepID=A0A1C4XVE3_MICVI) HSP 1 Score: 54.7 bits (130), Expect = 2.760e-6 Identity = 30/107 (28.04%), Postives = 50/107 (46.73%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTA 336
F+++ F A P R +F + + +LV +G ++S + L++L A H K V Y L T++ +G+ WTEE E WTA + +M+ A
Sbjct: 24 FYSTLFLAYPEVRQMFPANMAGQRDRLVSALGHIVSHVDQVDGLVGFLQDLGADHRKFAVRAEHYPAVGEALLATLRHFLGEAWTEELEQDWTAAYGLVSQVMIDAA 130
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: A0A3N2P555_9ACTN (Flavohemoprotein n=2 Tax=Micromonospora sp. HM5-17 TaxID=2487710 RepID=A0A3N2P555_9ACTN) HSP 1 Score: 54.7 bits (130), Expect = 2.770e-6 Identity = 31/107 (28.97%), Postives = 51/107 (47.66%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTA 336
F+++ F A P R +F + + +L+ +G ++S + A Q L+ L A H K V P Y L T++ +G+ WTEE W+A I +M+ A
Sbjct: 24 FYSTLFLAYPETRQMFPTNMAGQRDRLLTALGHIVSHVDQAEQLVGFLQSLGADHRKFAVRPEHYPAVGEALLATLRHFLGEQWTEELAQDWSAAYGLIAKVMMDGA 130
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: A0A848E9L8_9PROT (Hemin receptor n=2 Tax=Roseomonas TaxID=125216 RepID=A0A848E9L8_9PROT) HSP 1 Score: 52.0 bits (123), Expect = 5.280e-6 Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 1
Query: 7 SDDFFASFFEAVPTARMLFNGK-LRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIM 324
+D F+ F PT+R LF L + + KL+ M+ S+++ A + E LA H GV QY L T++K +G+ WT++ +WTA S + +M
Sbjct: 24 ADLFYDRLFAIDPTSRPLFKSDTLPEQKRKLMLMLNSVVAGLSRPADIVPAAEALARRHVNYGVTAEQYDSVGAALLWTLEKGLGEAWTKDASEAWTAAYSLLSGVM 130
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: A0A1M6M959_9BRAD (Nitric oxide dioxygenase n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6M959_9BRAD) HSP 1 Score: 52.0 bits (123), Expect = 5.870e-6 Identity = 28/107 (26.17%), Postives = 49/107 (45.79%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTA 336
F+ FE P + +F G + + KL+ M+G+++ + + LA H G Y L T++K +GD WT E ++WTA +++ M+ A
Sbjct: 27 FYDRLFEIAPAVKPMFTGDMAVQRGKLMTMLGAVVKGLSNIESILPAASALAIRHVSYGAKAEHYPVVGAALLWTLEKGLGDGWTPEVADAWTAAYTTLSGYMISEA 133
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: A0A2R4FCC9_9ACTN (Flavohemoprotein n=5 Tax=Plantactinospora TaxID=673534 RepID=A0A2R4FCC9_9ACTN) HSP 1 Score: 53.1 bits (126), Expect = 9.600e-6 Identity = 30/107 (28.04%), Postives = 50/107 (46.73%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTA 336
F+++ F A P R +F + + +LV +G ++S+ + Q L L A H K V P Y L T+ +G++WTE+ WTA + +M+ A
Sbjct: 24 FYSTLFLAHPDIRQMFPTNMAGQRDRLVTALGHVVSNVDQVDQLVGFLHSLGADHRKFAVRPEHYPAVGEALLATLAHFLGEHWTEDLAQDWTAAYGLVSKVMIDGA 130
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Match: UPI001CE3617D (globin domain-containing protein n=1 Tax=Bradyrhizobium sp. CNPSo 4026 TaxID=2821403 RepID=UPI001CE3617D) HSP 1 Score: 50.8 bits (120), Expect = 1.610e-5 Identity = 28/107 (26.17%), Postives = 47/107 (43.93%), Query Frame = 1
Query: 16 FFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKKSLEELAALHGKRGVHPNQYAPFSVCLFETIKKRMGDYWTEEQENSWTALISSILHIMVPTA 336
F+ FE P R +F + + + KL+ + +++ + A + LA H G P Y L T++K +GD WT E +WTA ++ M+ A
Sbjct: 27 FYDRLFEVAPAVRAMFPSDMTEQRRKLMATLAVVVNGLSNLASVLPAASALAKRHVSYGARPEHYPAVGGALLWTLEKGLGDAWTPEVAEAWTAAYGTLSGYMISEA 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1244.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1244.10.1 >prot_H-akashiwo_Contig1244.10.1 ID=prot_H-akashiwo_Contig1244.10.1|Name=mRNA_H-akashiwo_Contig1244.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=116bp KFSDDFFASFFEAVPTARMLFNGKLRQVQWKLVKMIGSMMSSKESAAQRKback to top mRNA from alignment at H-akashiwo_Contig1244:316158..316505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1244.10.1 ID=mRNA_H-akashiwo_Contig1244.10.1|Name=mRNA_H-akashiwo_Contig1244.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=348bp|location=Sequence derived from alignment at H-akashiwo_Contig1244:316158..316505+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1244:316158..316505+ >mRNA_H-akashiwo_Contig1244.10.1 ID=mRNA_H-akashiwo_Contig1244.10.1|Name=mRNA_H-akashiwo_Contig1244.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=348bp|location=Sequence derived from alignment at H-akashiwo_Contig1244:316158..316505+ (Heterosigma akashiwo CCMP452)back to top |