mRNA_H-akashiwo_Contig124.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A6U3TXN2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TXN2_9STRA) HSP 1 Score: 268 bits (686), Expect = 3.170e-86 Identity = 159/328 (48.48%), Postives = 198/328 (60.37%), Query Frame = 1
Query: 1 MKIRSSLLPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQASGGVD----------------YFFCSSWTVPPLLGIAYVVLGGILPRVFQSFLPS-------------------------KDTEK----------QAP---------KMEKSPSE---------LRNTALVAVTTTALIIKLSEILETNP-------GLLDSSEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLGSIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFDCLEE 756
MK+ +LP A T++KLF TG+ VGPVVDSLHNQCLL Y +API + WP + D Y FCSSW VPPLLG+AYVVLGG+LPR+ Q + + KDT K +P K+E++ ++ +RN ALVAV +TALIIKLSE LET LD +N+++M+ AA+ QWA LDGT+AALLAAT+TS+GGPLSELPFVA+G W YLPEA DYLPLS G+ + +F+ G G +Y+DLALSSITGPCYFAVTMDAIALGRWFD ++
Sbjct: 1 MKVLPQILPRATTSSKLFITGATVGPVVDSLHNQCLLTYGIAPISIPWPSFTMPTDAAAAXXXXSDATVTSSYLFCSSWLVPPLLGVAYVVLGGVLPRLMQILIDNVSNVNDDASTISNNNDINTFTGNKTKDTRKGFFLRWKDKLSSPLQKLSKINIKIEENNNDGENRQYQTGMRNRALVAVLSTALIIKLSEFLETQQLDAFVTNTNLDIGMSNLIIMLFAALAQWATLDGTIAALLAATVTSIGGPLSELPFVASGCWSYLPEAADYLPLSQ-GTALGDIVGIFASGGGGDYRDLALSSITGPCYFAVTMDAIALGRWFDADDD 327
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A7R9ZTI6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZTI6_9STRA) HSP 1 Score: 265 bits (677), Expect = 3.200e-85 Identity = 152/293 (51.88%), Postives = 183/293 (62.46%), Query Frame = 1
Query: 28 NAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWP-------------------------QASG--GVDYFFCSSWTVPPLLGIAYVVLGGILPRVFQSFLPSKDTEKQ----APKMEK--SPSELRNTALVAVTTTALIIKLSEILETNPGLLDSS----------EANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLGSIPSQL-----------DALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFD 744
+ +TTAKLF TG VGP+VDSLHNQCLL YD PI L WP ++SG Y+FCSSW VPPLLG AYVVLGG+LPR+ +S L S +KQ P K S +LR AL+AVTTTA+IIKLSE LET+PG+LD S ++LVMIMA++ QWA+LD ++ AL+ AT+T++GGPL+ELPFV +G W Y+ +A DY PL NL SI ALF NY+DLALSSITGPCYFAV MDAIALGRWFD
Sbjct: 5 STSTTAKLFATGFTVGPIVDSLHNQCLLRYDFLPISLQWPIVLQQNQNAFGDIAVRSSTIAADAIESSGIHAYPYYFCSSWIVPPLLGFAYVVLGGLLPRILESILESLQIQKQEANATPSSSKVLSSQKLRTRALLAVTTTAMIIKLSEFLETHPGVLDGSGILHSPIETVSLSLLVMIMASLSQWALLDQSIVALVVATVTAIGGPLAELPFVGHGAWTYIDQAADYFPLQNLPSIAPTFASSDNLLLEMSQALFGT---SNYQDLALSSITGPCYFAVAMDAIALGRWFD 294
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A7S4K710_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K710_9STRA) HSP 1 Score: 263 bits (673), Expect = 8.780e-85 Identity = 146/255 (57.25%), Postives = 171/255 (67.06%), Query Frame = 1
Query: 10 RSSLLPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQA-----SGGVDYFFCSSWTVPPLLGIAYVVLGGILPRVFQSFL----PSKDTEKQAPKMEKSP---------SELRNTALVAVTTTALIIKLSEILETNPGLLDSS-EANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLGSIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMD 717
++ L P TTAKLF G+ VGPVVDS+HNQCLL YD+API + WP A S Y FCSSW +PPLLGIAYVVLGGILPR+FQ+ + P+ + P E S LR L+AV +T IIKLS+ L+T+P L S EAN++ M AA+ QW ILDGT AALLAA IT+VGGPLSELPFV+ G WHY+P A DYLPLS S LDA W LG+ Y+DLALSSITGPCYFAVTMD
Sbjct: 38 KNMLFPKPQTTAKLFAVGATVGPVVDSIHNQCLLRYDIAPISIPWPGAAADATSAAASYAFCSSWLIPPLLGIAYVVLGGILPRLFQAAIDAASPALSGGSKVPVNESGAGSIPNLDGASVLRTKGLLAVVSTTAIIKLSDYLQTHPDALGGSPEANLVAMSAAALAQWTILDGTPAALLAAAITAVGGPLSELPFVSAGCWHYIPSAADYLPLSG-SSFGGGLDAATRWLLGDGYRDLALSSITGPCYFAVTMD 291
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A448ZGB0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGB0_9STRA) HSP 1 Score: 255 bits (651), Expect = 3.770e-81 Identity = 148/289 (51.21%), Postives = 183/289 (63.32%), Query Frame = 1
Query: 34 ATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWP------------------QASGGVD----YFFCSSWTVPPLLGIAYVVLGGILPRVFQSF---LPSKDTEKQAPKME---------KSPSELRNTALVAVTTTALIIKLSEILETNPGLLDS--------SEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNL---------GSIPSQLDALFSWGLG-ENYKDLALSSITGPCYFAVTMDAIALGRWFD 744
+T AKLF TG+ VGP+VDSLHNQCLL Y + PI L WP ASG + +FFCSSWTVPPLLG AYVVLGG+LPR+ ++F L +++ ++ P +E S ELR A++AVT+TALIIKLSE+LET+PG+ D+ A++ VMI AAV QW +LDG++ ALL AT+T+VGGP+SELPFV +G W YL A DYLPL N S L L G +Y++LALSSITGPCYFAV MDAIALGRWFD
Sbjct: 7 STAAKLFATGATVGPIVDSLHNQCLLRYQVLPICLEWPPAFLQKQTEMVGFAAIASDASGAISDQYPFFFCSSWTVPPLLGFAYVVLGGVLPRIAETFAELLSNQNPNQRPPLLETTAKASIPYSSSRELRTRAILAVTSTALIIKLSEVLETHPGIFDNLNVAHGHPEAASLCVMIAAAVLQWVLLDGSITALLVATVTAVGGPISELPFVGHGVWTYLEGAADYLPLQNFLVDSVATTASDDSSLLLQLLRVVFGTSSYRELALSSITGPCYFAVAMDAIALGRWFD 295
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: B7FZ91_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ91_PHATC) HSP 1 Score: 245 bits (626), Expect = 9.150e-78 Identity = 142/270 (52.59%), Postives = 179/270 (66.30%), Query Frame = 1
Query: 22 LPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQASGGVD----------YFFCSSWTVPPLLGIAYVVLGGILPRVFQSFL----------PSKDTEKQAPKMEKSPSELRNTALVAVTTTALIIKLSEILETNP-------GLL--DSSEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLGSIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFD 744
LP+A+T+AKLF G+ +GPVVDSLHNQ LL Y++API + WP + G +FFCSSWTVPPLLG+AY+VLGGILPR+FQ + PS D + +E++ LR A++AV +TA II+LS+ T+P G L +E +IL +++ A+ QWA+LDGTLAALL A+ITS+GGPLSELP VA W YLP A DY PL N+ P L + LG++Y LALSSITGPCYFAVTMDAIAL RWFD
Sbjct: 13 LPSASTSAKLFGVGATIGPVVDSLHNQVLLRYNIAPITIDWPSSWAGTSDSTLIATTASHFFCSSWTVPPLLGVAYIVLGGILPRLFQKGINAVSPSLTDQPSVDDSQNESTLERT---LRWKAILAVLSTAAIIQLSDFWTTHPDATRAVLGTLIEQPAEQHILALLLLALLQWAVLDGTLAALLVASITSIGGPLSELPLVAANVWTYLPSAADYTPLLNI-EWP-----LLASLLGDDYATLALSSITGPCYFAVTMDAIALARWFD 273
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A1E7EW93_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW93_9STRA) HSP 1 Score: 246 bits (629), Expect = 2.250e-77 Identity = 144/320 (45.00%), Postives = 188/320 (58.75%), Query Frame = 1
Query: 28 NAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQASG-----------GVD------------YFFCSSWTVPPLLGIAYVVLGGILPRVFQSFLPS---KDTEKQAPKMEKSPSE--------------------------LRNTALVAVTTTALIIKLSEILETNPGLL---------------------DSSEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLG------SIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFDCL 750
+ +T KLF+TG +VGP+VDSLHNQCLL YD+ PI + WP +G GVD +FFCSSWTVPPLLGIAY++LGG+LPR+ +S L K+ ++ + +P + L+ A++AVTTTA+IIKLSE LET+ +L SEA++LVM+MAA QWA+LDG++ ALL AT+T++GGP+SELPFV +G W YL EA +Y PL N+ +P QL + +G NY DLA+S+ITGPCYFAV MDAIALGRWFD L
Sbjct: 9 STSTATKLFSTGFIVGPIVDSLHNQCLLRYDILPISVQWPTITGPASPVAPLLSFGVDNNPSIIDYHYYPFFFCSSWTVPPLLGIAYLILGGVLPRIVESILLQVKLKNEQRNSKSRATTPDDTIDTIDTSSXXXXSYSSTWQQQKQKQLQTRAILAVTTTAIIIKLSEYLETHHDILFVDNDTTTATTSMLLSYLNIHTHSEASLLVMLMAATIQWAVLDGSIIALLVATLTAIGGPISELPFVGHGVWTYLDEAANYFPLQNININNILQQLPEQLPQII-FGT-SNYHDLAISTITGPCYFAVAMDAIALGRWFDSL 326
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A1Z5JY77_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JY77_FISSO) HSP 1 Score: 224 bits (572), Expect = 3.560e-70 Identity = 134/260 (51.54%), Postives = 169/260 (65.00%), Query Frame = 1
Query: 7 IRSSLLPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQASGGVDYFFCSSWTVPPLLGIAYVVLGGILPRVFQSFLPSKDTEK----QAPKMEKSPSE----LRNTALVAVTTTALIIKLSEILETNPGLLDSSEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLGSIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFDCLEEED 762
++ S LP+ T+++LF TG+LVGP+VD LHNQCLLEY API L+W + D FC+S VPPLLGIAYVVLGG+LPR +P++ ++ Q+P + E LRN AL AV TTALIIKLSEILET +++ N+++++ AV QWA LDGTL A L A+ITS+GGP SELPFVA W YL A D PL + +P L + L L+ ITGPCYFAVTMDAIALGRW+D L E +
Sbjct: 1 MKVSNLPSFYTSSRLFGTGALVGPLVDGLHNQCLLEYHKAPITLAWNE-----DPIFCTSLWVPPLLGIAYVVLGGVLPRFLSRNVPTRVNDRFLTTQSPNQILTLPERTILLRNKALWAVFTTALIIKLSEILETQS--FFATDRNVILLLGCAVLQWACLDGTLVAFLLASITSIGGPQSELPFVAADVWQYL--APDQFPLLSFQFLPDDL------------QQLGLNRITGPCYFAVTMDAIALGRWYDALRENE 239
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A1Z5K4P6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4P6_FISSO) HSP 1 Score: 221 bits (562), Expect = 1.590e-68 Identity = 132/260 (50.77%), Postives = 165/260 (63.46%), Query Frame = 1
Query: 1 MKIRSSLLPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQASGGVDYFFCSSWTVPPLLGIAYVVLGGILPRVFQSFLPSKDTEK----QAPKMEKSPSE----LRNTALVAVTTTALIIKLSEILETNPGLLDSSEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNLGSIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFDCLEE 756
MK+ + LP+ T+++LF TG+L+GP+VD LHNQCLLEY API ++W D FC+S VPPLLGIAYVVLGG+LPR +P+ T++ Q P + E LRN AL AV TTALIIKLSE+LET ++ N+++++ AV QW LDGTL ALL A+ITS+GGPLSELPFVA W Y + D PL +P L + L L+ ITGPCYFAVTMDAIALGRW+D L E
Sbjct: 1 MKVNN--LPSLFTSSRLFGTGALLGPLVDGLHNQCLLEYHRAPITVAWND-----DPIFCTSLWVPPLLGIAYVVLGGVLPRALSQIVPTNVTDRFLTTQYPNQSITVQERTMFLRNKALWAVFTTALIIKLSELLETQS--FFAANFNVILLLCCAVLQWVCLDGTLVALLLASITSIGGPLSELPFVAANVWQYT--SPDQFPLLPFQFVPDDL------------QQLGLNRITGPCYFAVTMDAIALGRWYDALWE 237
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A7S2EFV6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EFV6_TRICV) HSP 1 Score: 214 bits (545), Expect = 2.210e-66 Identity = 117/199 (58.79%), Postives = 148/199 (74.37%), Query Frame = 1
Query: 19 LLPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQASGGVDYFFCSSWTVPPLLGIAYVVLGGILPRVFQSFL---PSKDTEKQAPKMEKSPSE-LRNTALVAVTTTALIIKLSEILETNPGLL--DSSEANILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLS 597
++P +T+ KLF TG+ VGP+VDS+HNQCLL+YDLAPI + P S Y C+SW +PPLLGIAYVVLGG+LPR+FQS L P D K+ ++ +E LR LVAV+TTALIIKLS+ L+T+PG +EAN+ VM +AA+ QWA+LD T AALLAA+IT+VGGPLSELPFVA+G WHY+ A DYLPL+
Sbjct: 13 IVPKRSTSLKLFATGATVGPLVDSIHNQCLLQYDLAPISIPSPIESHA-PYLLCTSWLIPPLLGIAYVVLGGVLPRLFQSVLGAVPISDKRGSVGKVGEATAETLRMKGLVAVSTTALIIKLSDYLQTHPGEAFGGGAEANVAVMALAALSQWALLDRTPAALLAASITAVGGPLSELPFVAHGCWHYISAAADYLPLA 210
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Match: A0A7S1GJQ6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJQ6_CYCTE) HSP 1 Score: 174 bits (442), Expect = 1.630e-51 Identity = 98/176 (55.68%), Postives = 125/176 (71.02%), Query Frame = 1
Query: 286 QAPKMEKSPSE--LRNT------ALVAVTTTALIIKLSEILETNPGLLDSSEA----NILVMIMAAVGQWAILDGTLAALLAATITSVGGPLSELPFVANGFWHYLPEAGDYLPLSNL----GSIPSQLDALFSWGLGENYKDLALSSITGPCYFAVTMDAIALGRWFDCLEEEDK 765
Q P SPS + NT A+ AV TTA+II+LS+ LET+ D + N+ +M+MAA+ QWA+LDGTLAALL+A++ S+GGPLSELPFVA+GFWHYLP+AGDYLPL+ + G++ + L LG NY DLALSSITGPCYFAVTMDAIALGRWFD +++ +
Sbjct: 2 QLPTSSSSPSSSFMSNTLVARFKAVAAVLTTAMIIELSQYLETSQSFHDDTSTFLFGNVGIMLMAALSQWALLDGTLAALLSASLVSIGGPLSELPFVAHGFWHYLPQAGDYLPLAGVEWGNGNLVAGL-------LGTNYHDLALSSITGPCYFAVTMDAIALGRWFDTNDDKPR 170 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig124.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig124.4.1 >prot_H-akashiwo_Contig124.4.1 ID=prot_H-akashiwo_Contig124.4.1|Name=mRNA_H-akashiwo_Contig124.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=256bp MKIRSSLLPNAATTAKLFTTGSLVGPVVDSLHNQCLLEYDLAPIGLSWPQback to top mRNA from alignment at H-akashiwo_Contig124:609560..610327- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig124.4.1 ID=mRNA_H-akashiwo_Contig124.4.1|Name=mRNA_H-akashiwo_Contig124.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=768bp|location=Sequence derived from alignment at H-akashiwo_Contig124:609560..610327- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig124:609560..610327- >mRNA_H-akashiwo_Contig124.4.1 ID=mRNA_H-akashiwo_Contig124.4.1|Name=mRNA_H-akashiwo_Contig124.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=768bp|location=Sequence derived from alignment at H-akashiwo_Contig124:609560..610327- (Heterosigma akashiwo CCMP452)back to top |