mRNA_H-akashiwo_Contig1238.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK) HSP 1 Score: 236 bits (603), Expect = 4.920e-75 Identity = 118/136 (86.76%), Postives = 125/136 (91.91%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
VLEA+GLGEV KYTPCAPGVHLSS+SSG++VDV+TYQSLVGA QFI FRPDISFAVGKLSKFLVSPNL HMDAALYLAGYLRRTASKGMVFGGARDY V V SDS+HGNCP TG+STSGL VFVGGSLIVHKSK
Sbjct: 154 VLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSK 289
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK) HSP 1 Score: 236 bits (603), Expect = 7.030e-73 Identity = 118/136 (86.76%), Postives = 125/136 (91.91%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
VLEA+GLGEV KYTPCAPGVHLSS+SSG++VDV+TYQSLVGA QFI FRPDISFAVGKLSKFLVSPNL HMDAALYLAGYLRRTASKGMVFGGARDY V V SDS+HGNCP TG+STSGL VFVGGSLIVHKSK
Sbjct: 351 VLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSK 486
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK) HSP 1 Score: 236 bits (603), Expect = 1.900e-71 Identity = 118/136 (86.76%), Postives = 125/136 (91.91%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
VLEA+GLGEV KYTPCAPGVHLSS+SSG++VDV+TYQSLVGA QFI FRPDISFAVGKLSKFLVSPNL HMDAALYLAGYLRRTASKGMVFGGARDY V V SDS+HGNCP TG+STSGL VFVGGSLIVHKSK
Sbjct: 527 VLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSK 662
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK) HSP 1 Score: 194 bits (493), Expect = 1.110e-55 Identity = 88/136 (64.71%), Postives = 111/136 (81.62%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
+L+ +GL +V K+TPCAPGVH+S++SS + D+ YQ+LVGA F+ FRPDI+F+VGKLS+FL PN HMDAALYLAGYLRRT KGMVFGG+RDY + + SDS+HGNCP +G+STSG+AVF G SLI+HKSK
Sbjct: 483 ILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSK 618
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK) HSP 1 Score: 160 bits (404), Expect = 8.100e-44 Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGG--ARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
+LE +GL K+TPCAPGV +S +S+ + D+D YQ LVG QFI FR D +FAVG+LS++L PN H +AA YLAGYLRRTA GMVFGG Y + + +DS+HG CP T +STSG++V++G SLI+HKSK
Sbjct: 306 LLERHGLENAHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSK 443
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: UPI00142E4CC0 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E4CC0) HSP 1 Score: 95.9 bits (237), Expect = 2.790e-21 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
+L+ GL + P P V LSS + G VD + Y+ LVG ++ RPDI+FAV KLS+F +P H+ A L + Y++ +G+ + + + F+D++ G+C T +STSG +F+G SLI KSK
Sbjct: 133 LLDETGLLGCKPSSIPMDPSVKLSSETGGDFVDAEAYRRLVGRLMYLQITRPDITFAVNKLSQFSCAPRDSHLKALLKVLHYIKGIVGQGLFYSSKAEMQIQTFADADWGSCQDTRRSTSGSCIFLGTSLIAWKSK 268
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A2Z6PIW5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6PIW5_TRISU) HSP 1 Score: 98.2 bits (243), Expect = 3.670e-21 Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
+LE GL + TP P + LS +S D Y+ LVG ++ RP+I++AV KLS+FL +P HM A L++ YL+ KG+ FG ++ FSDS+ G CP T +ST+G F+G SL+ KSK
Sbjct: 831 LLEDTGLLGTKPCSTPMQPHLQLSKDSGTLLTDPTAYRRLVGRLLYLTHSRPEIAYAVSKLSQFLSTPTNDHMLAGLHVLKYLKNNPGKGLFFGSTSTISLKGFSDSDWGACPDTRRSTTGYCFFIGHSLVSWKSK 966
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: A0A392M174_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trifolium medium TaxID=97028 RepID=A0A392M174_9FABA) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-20 Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
+L+ GL + TP P + L +S D TY+ LVG ++ RP+I++AV KLS+FL SPN HM AAL++ YL+ +G+ F + +SDS+ G CP T +ST+G F+G SLI KSK
Sbjct: 606 LLQDTGLLAAKPCPTPMQPQLQLHKSSGSPLSDPTTYRRLVGRLLYLTHSRPEIAYAVSKLSQFLDSPNDAHMLAALHVLKYLKNNPGQGLFFSATSSLQLKGYSDSDWGACPDTRRSTTGFCFFLGTSLISWKSK 741
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: UPI000C1CDE8C (uncharacterized protein LOC111371108 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CDE8C) HSP 1 Score: 92.4 bits (228), Expect = 1.930e-20 Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1 VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYA---VGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
+LE G + P P HLS + D Y+ L+G ++ RPDI++AV KLS+FL P L H+ AA +L YL+ + +G+ F D + + FSD++ G+C T KST+G +F+G S+I KSK
Sbjct: 46 LLEDTGYLNCKPANAPMDPKTHLSLHEGDLLTDASQYRQLIGRLLYLTISRPDITYAVHKLSQFLSQPRLPHLKAAHHLLRYLKNSPGQGIFFSAKNDGSDLKLQAFSDADWGSCVDTRKSTTGFCIFIGNSMISWKSK 184
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Match: UPI000B8D0A3F (uncharacterized protein LOC110815833 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D0A3F) HSP 1 Score: 93.2 bits (230), Expect = 2.110e-20 Identity = 44/121 (36.36%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 46 PCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFRPDISFAVGKLSKFLVSPNLGHMDAALYLAGYLRRTASKGMVFGGARDYAVGVFSDSNHGNCPGTGKSTSGLAVFVGGSLIVHKSK 408
P P + +S + D+ +Y+ L+G ++ RPDI ++V +LS+FL +P H+ AAL + Y++RT +G+ F + + VFSD++ G CP T +S +G VF+G SL+ KSK
Sbjct: 148 PMDPNIKMSKDDGELLSDITSYRRLIGKLLYLTISRPDICYSVNRLSQFLATPRTSHLQAALRILQYIKRTLGQGLFFPSSSAIQIKVFSDADWGICPDTRRSLTGFCVFLGSSLVSWKSK 268 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1238.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1238.1.1 >prot_H-akashiwo_Contig1238.1.1 ID=prot_H-akashiwo_Contig1238.1.1|Name=mRNA_H-akashiwo_Contig1238.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=136bp VLEAYGLGEVRSKYTPCAPGVHLSSNSSGRQVDVDTYQSLVGASQFIWGFback to top mRNA from alignment at H-akashiwo_Contig1238:65103..65510- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1238.1.1 ID=mRNA_H-akashiwo_Contig1238.1.1|Name=mRNA_H-akashiwo_Contig1238.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=408bp|location=Sequence derived from alignment at H-akashiwo_Contig1238:65103..65510- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1238:65103..65510- >mRNA_H-akashiwo_Contig1238.1.1 ID=mRNA_H-akashiwo_Contig1238.1.1|Name=mRNA_H-akashiwo_Contig1238.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=408bp|location=Sequence derived from alignment at H-akashiwo_Contig1238:65103..65510- (Heterosigma akashiwo CCMP452)back to top |