mRNA_H-akashiwo_Contig1237.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1237.4.1
Unique NamemRNA_H-akashiwo_Contig1237.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 283 bits (724), Expect = 7.300e-94
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 
Query:   64 MIACAQNEAFVTNAKQSSFSANKGPVVLKTRVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 489
            MIACAQNEAFVTNAKQSSFSANKGPVVLKTRVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS
Sbjct:    1 MIACAQNEAFVTNAKQSSFSANKGPVVLKTRVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 142
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.510e-49
Identity = 89/150 (59.33%), Postives = 114/150 (76.00%), Query Frame = 1 
Query:   46 LVLLLCMIAC--AQNEAFVT-NAKQSSFSANKGPVVLKTRVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGR 486
            +VLLL ++A   A  E F T N K  S+ ++       + +   R+VPKAHQVTI+HEG  TVLEV E T+IL+AALDAGIDLPHDC+LGVCLTCPS++VSGEVDQ  GTL+DSV  QG+ALTC+++PRSDC + S+ EDE+V+AQF+ R
Sbjct:    7 IVLLLGVLAAIAATGEGFATHNLKPVSWRSSP------SSLSRQRLVPKAHQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.540e-48
Identity = 84/101 (83.17%), Postives = 89/101 (88.12%), Query Frame = 1 
Query:  187 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 489
            HQVTIEHEGT+TVLEV E T+IL+AALD  IDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTA GYALTC T+ RSD TI S+ EDELV AQFS RS
Sbjct:   64 HQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 164
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 150 bits (380), Expect = 7.360e-42
Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 1 
Query:  181 KAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 489
            K ++VTI+HEG  T+L+V +  SIL+AALDAGIDLPHDCKLGVCLTCPSK+VSG+VDQSDGTL  SV A+GYALTC++FP SD  + SI EDELV AQFS  S
Sbjct:   41 KTYKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFSRNS 143
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 149 bits (375), Expect = 5.960e-41
Identity = 73/100 (73.00%), Postives = 81/100 (81.00%), Query Frame = 1 
Query:  187 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGR 486
            HQVTIE  G +  LEV E TS+L+AALDAGI+LPHDCKLGVCLTCPSK+VSGEVDQ   TL+DSV  QGYALTC +FPRSD  I +I EDELV AQF GR
Sbjct:   55 HQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGR 154
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 140 bits (353), Expect = 7.730e-38
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 1 
Query:  154 RVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFS 480
            RV ++   P+A++VTIEH G + V+EV E  +IL  ALD GID+PHDCKLGVC+TCP+++V+GEVDQSDG L D V AQGYAL C ++PRSDCTI  I EDEL+  Q +
Sbjct:   30 RVAAALPAPRAYRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A8J5WV81_ZIZPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WV81_ZIZPA)

HSP 1 Score: 139 bits (350), Expect = 2.300e-37
Identity = 64/109 (58.72%), Postives = 83/109 (76.15%), Query Frame = 1 
Query:  154 RVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFS 480
            R    R+   A++VTIEH G + V+EV E+ +IL+ ALD GID+PHDCKLGVC+TCP+++V+G+VDQSDG L D V AQGYAL C ++PRSDCTI  I EDEL+  Q +
Sbjct:   32 RCPQERLRAAAYKVTIEHAGESRVVEVEEHETILERALDEGIDVPHDCKLGVCMTCPARLVAGQVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 140
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BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 139 bits (349), Expect = 3.550e-37
Identity = 64/101 (63.37%), Postives = 80/101 (79.21%), Query Frame = 1 
Query:  178 PKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFS 480
            P+A++VTIEH G + V+EV E  +IL  ALD GID+PHDCKLGVC+TCP+++V+GEVDQSDG L D V AQGYAL C ++PRSDCTI  I EDEL+  Q +
Sbjct:   43 PRAYKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143
[Close]
BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: J3LRB4_ORYBR (Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LRB4_ORYBR)

HSP 1 Score: 139 bits (349), Expect = 4.130e-37
Identity = 64/101 (63.37%), Postives = 80/101 (79.21%), Query Frame = 1 
Query:  178 PKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFS 480
            P+A++VTIEH G + V+EV E  +IL  ALD GID+PHDCKLGVC+TCP+++V+GEVDQSDG L D V AQGYAL C ++PRSDCTI  I EDEL+  Q +
Sbjct:   48 PRAYRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 148
[Close]
BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Match: A0A3B6JBX2_WHEAT (Ferredoxin n=7 Tax=Triticeae TaxID=147389 RepID=A0A3B6JBX2_WHEAT)

HSP 1 Score: 137 bits (346), Expect = 1.090e-36
Identity = 62/101 (61.39%), Postives = 79/101 (78.22%), Query Frame = 1 
Query:  178 PKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFS 480
            P+AH+VTIEH G + V+E+ E  +IL+ AL+ G+D+PHDCKLGVC+TCP+++VSG VDQSDG L D V AQGYAL C  +PRSDCTI  I EDEL+  Q +
Sbjct:   46 PRAHRVTIEHGGESRVVEMEEDENILERALEEGLDVPHDCKLGVCMTCPARLVSGRVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1237.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UW21_HETAK7.300e-94100.00Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7S2V4F7_9STRA4.510e-4959.33Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A6H5KV05_9PHAE2.540e-4883.172Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A482SDV3_9ARCH7.360e-4270.872Fe-2S iron-sulfur cluster binding domain-containi... [more]
A0A836CGC2_9STRA5.960e-4173.002Fe-2S ferredoxin-type domain-containing protein n... [more]
UPI001ADA50ED7.730e-3860.55ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy... [more]
A0A8J5WV81_ZIZPA2.300e-3758.722Fe-2S ferredoxin-type domain-containing protein n... [more]
Q850T5_ORYSJ3.550e-3763.37Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_... [more]
J3LRB4_ORYBR4.130e-3763.37Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 Re... [more]
A0A3B6JBX2_WHEAT1.090e-3661.39Ferredoxin n=7 Tax=Triticeae TaxID=147389 RepID=A0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1237contigH-akashiwo_Contig1237:229419..241462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G156
PFAMsFer2
Model size928
Max annot lvl2759|Eukaryota
KEGG koko:K02639
KEGG Pathwayko00195,map00195
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009642,GO:0009644,GO:0009987,GO:0016491,GO:0022900,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0055114
Exons5
Evalue9.93e-52
EggNOG OGsCOG0633@1|root,2RZRG@2759|Eukaryota
Ec32 ortholog description2Fe-2S ferredoxin-type domain
Ec32 orthologEc-08_005330.1
Description2 iron, 2 sulfur cluster binding
Cds size462
COG categoryC
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1237.4.1prot_H-akashiwo_Contig1237.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1237 229855..241432 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387128.4801142-UTR-H-akashiwo_Contig1237:229418..2298541681387128.4801142-UTR-H-akashiwo_Contig1237:229418..229854Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1237 229419..229854 -
1681387128.5463321-UTR-H-akashiwo_Contig1237:241432..2414621681387128.5463321-UTR-H-akashiwo_Contig1237:241432..241462Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1237 241433..241462 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387128.4913995-CDS-H-akashiwo_Contig1237:229854..2299561681387128.4913995-CDS-H-akashiwo_Contig1237:229854..229956Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1237 229855..229956 -
1681387128.504845-CDS-H-akashiwo_Contig1237:238380..2384701681387128.504845-CDS-H-akashiwo_Contig1237:238380..238470Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1237 238381..238470 -
1681387128.5171607-CDS-H-akashiwo_Contig1237:240880..2409761681387128.5171607-CDS-H-akashiwo_Contig1237:240880..240976Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1237 240881..240976 -
1681387128.5272913-CDS-H-akashiwo_Contig1237:241094..2412101681387128.5272913-CDS-H-akashiwo_Contig1237:241094..241210Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1237 241095..241210 -
1681387128.5367332-CDS-H-akashiwo_Contig1237:241374..2414321681387128.5367332-CDS-H-akashiwo_Contig1237:241374..241432Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1237 241375..241432 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1237.4.1

>prot_H-akashiwo_Contig1237.4.1 ID=prot_H-akashiwo_Contig1237.4.1|Name=mRNA_H-akashiwo_Contig1237.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=154bp
MISRCLVLLLCMIACAQNEAFVTNAKQSSFSANKGPVVLKTRVKSSRIVP
KAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSK
VVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFS
GRS*
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mRNA from alignment at H-akashiwo_Contig1237:229419..241462-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1237.4.1 ID=mRNA_H-akashiwo_Contig1237.4.1|Name=mRNA_H-akashiwo_Contig1237.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=12044bp|location=Sequence derived from alignment at H-akashiwo_Contig1237:229419..241462- (Heterosigma akashiwo CCMP452)
GTTCTGACTCTTCTGGACATTCCAGCCAAGATGATTTCTAGGTGCCTCGT
TTTACTTCTATGCATGATCGCGTGCGCTCAAAATGAGGGTAAGGCCCTTT
TTGGGGGGAAACAAGTTGCCTTTTTATCTCTACATGAACTTGGGGTTTTC
ATGTAGACAAACACTTGCAATAGCATCGCTTTGGATTTTGATTTGCTTTG
GCCTCATTTTGGTTCTTCAATCCTTTTATCGCTGCCCATAACTTTATGGA
AGCTTTTGTGACCAATGCAAAGCAGTCAAGCTTCAGTGCTAACAAAGGCC
CCGTTGTTTTGAAGACAAGAGTAAAGAGCTCTAGAATTGTTCCAAAGGCG
CACCAGGTCACGATTGAGGTAAATGTACTGGAAAATAACCTCACGAGGGC
GTTTTTTAGTCCCTTCGAACATAACTCTGGAATAATCTAGCTATACCTCC
TGTGTGGTAACTGCGACATTTTACCTGGACACGCAGCATGAAGGCACTAC
CACGGTCCTTGAGGTTCCAGAGTACACTTCAATTCTAGATGCCGCTTTGG
ATGCTGGGATTGACCTCCCCCACGACTGCAAGGTAACTGAACCAATGCCA
GCTACAAAGGCACTATTAAACGCTTCTGTTTCCCACCACCAAAAAAAAAA
ATGTACATGAGCTTCCTTGTTGTAGTCTATTTTATGAATGAAACAAAGAA
GACATTAAAGTTATGTTGGAGTATCAAGATATATGTTTTTTTTTTTTTTT
GTCTACGTATAAGCACAAAGTGGAGAAATAGTTCAGCTAGGCTATGATGC
TACCTCTGCTCATGTCATTTGCATTTTTCTTTCTTTCCCTTTTTTCTTTT
TTTTTCTTCTTTTTCTAAGACTTCTGATGTGGCTGGGAGACAATATGACG
TTGAAGCTGCTTTCTGAGTGGGATGAAACCTTCTATGCGCTGCTGTTGAA
GAGCTTCATGATCGAGGCTGTTCCATATCTCTGGGATTCTTGCTCTGTAG
CTCCTTTTGTACGTCACCAGTGAGGGCCTGTTCCCTGTGTGGCGGATTGC
AGCAGCCTTCAGCTGATGAGGGTGCTGCGGCCCCGCCGCCCGTTGTGCTG
CGATTCTGTCAGAGGATCTCGTGGACTTGGTCGTAGGAGGAGCAAATACT
GGCTGCACTTCACTCAGCGCCCCCGCCCTTGGCCATCGAGCAGCTTGCAG
GTGAGGCCAACTGCCGCGCCTGCCTCCTACTTTCCAGCGAGGGATGAAGA
AGGCAGACGAGTCCATGAGCATCGAGACAGCACTGCTTTGAACCCTGTCG
AGTTTTTCGAGATAGCCCTCGGCCGCCCCCAGTAGATGAGGTTGCCGTAC
TCAATCTTTGATCGTCATGAAAAGCCTTGTAGGCCATCATCTTGGCACGA
TCATCCAGCATGTGGGCGATCCTCCCAATGGCACCAAGCCTCTTCCGGGC
CTCCTTGGCTACTGCCTTGGCATGTAGGGACCAATTACCTCGCGGATCGA
TGGTGAAACCCAGCGCCTCCAGCTGCTCCTTCTCTTCAACAATCACTCCC
CCATGGATAGAGGAGGGTGAGTCACCTTGTGATTCTCAGGCAAGTTGGTG
ATGATCAGCTCCTGGGACTTGGTAGGTTCAAACTCTAGTAGCCACTCCTT
GCCAAACTCATAGAGGCGCTGCAGATCATCGTTCAGCTCCTCTGCCGCCC
TGTCGCCGCCCCCTCTTCCCTGTCTACATCCTTCTGGAGGGTGAGGTCAT
CTCGTAGAAGAGGCATAGAGCCTCCCTGACTCGCTGTGGGGCGTTGCGAA
TGAAGAGGTCAAAGAGGAGAGGCGACCAGATGGCCCCTCGGCACCCCAGA
CTTGATGCTCATATGACTGGAGCTGTCACCATTTGCCACTACAAAGAGGG
CCCGGTCTGACAAGTAGCTCTGCATCAGCTTGAAGGCCTTGGAGCGCACA
CCCACCGCCCAGAGATGAGCAAGAAGACCCGCCACCACACCTTATCAAAG
GCACCCTTGAAGTCGAGCGCAACCAACCAAGACATCTTTCCTGGCTTCAA
GGGCCAGGGGAGATTGTGTCGGCGAGGATGACGCCGACATCCACGGTCCC
CGCACCAGGTAGGAAGCCAAACTGGTTGGGCGGGATGTGCCCGAAGAAAA
AAACTGCTGAGCTGCTTCATGAGAACGCGCTCAAACGTGGTGGCCAAAGT
GGGCAGCACCGAGATCGGCCGGTAGTTCTCCGGGAGGCTGGCATCCTTCT
TCTTGTAGACAGGGGTGACCCTTGCCACCTTCCAGCTCCTGGGGAACTCA
CCAGATTTGCCCACTTTCTGAAAAAAAAAGCCGAGTGAGAGGGCGCGCGC
CAGCTGCCGGGCGCAGTGTTTCAGTACCAGCGGGCTAACTCCGTCCGGGC
CCACCGACTTGCGCCGTCGCCCAGCGACTGCAGCACCTTAGACACTTCCC
GCAGGGTGATCTTGAAGCCCCGCAACCTTCTGGCTCCAGGTGGAGCCGGC
TCCAGCTCCGCACTTCTTTGCTCTCCTCACCAGGTAGGCTCATCTTCTTG
GCGAAGTATTTTGCCAGGTCCTCAGCAGGGGGGGCAGCTTTCCGCCGCTG
TCTGGTCATGCCGGAGTGCGACTTAGTGATCTGCCAGAACTCTCTGTCGC
TGGTCCCCTTCTTGGCAAGTTTGGTCTTGAGTCGCTCCATGTATCAGATT
GCTGGATGCCTTTTTTAGTTGCTGTGGTGTAAAATGACAACTACATAGCG
ATCATCATCAGCAAAGACTCTCCAACTTTGTTGGACATTTCAAAAAGTAC
TCATTGTTCTTCATTTATATGCATAGCGCTAGCAATTGGGAAGGGGCGGC
AACATGATCAGCATGGTACGGAAAAGCGTATTAGCAGTAAAAAGCCACAA
AGCCCCCCCTCCCTTTCTCCCTTTCCACCCTCTCACCCAGTCTCCACCGC
CCGCCTCTCCCCTCGCCGCCGCCGCCGCCGCCGCCGCCGCAGCTGGGCGT
GTGCCTGACCTGCCCGTCCAAGGTGGTCTCCGGCGAGGTGGACCAGAGCG
ACGGCACCCTGGAGGACTCCGTGACGGCCCAGGTGCGTCACGGCTAGGGC
AAAAGGGACCTTCCTTCTCCTTGTTATCGAAATGCTCGGATGGCATCTCC
TCTCCTTGGCGCATTCTGTGGTATTCCTGATACATCCATACTTGGACTCT
TCTGCCGCCAACGTCGCCCAACCTTTGATGAGTATCTTTTTCCGTCTCCA
CCCGAAAATTCAAGATGGTTCTGTTTCTGGTAGACGTCGTCCGCCCACCT
TTCCTTGCGAAGCTCCTGGAGGTGCCCCCCGCAATGCCTTTCTTTCATAC
GACCTCTGAGGGATCTCTCGGACCAGGCTTTGATTCTCTCGGGTCAGGCT
TTGAGCACTGGCCACCTGCTTGTTGTTTAGTACTAACTTTTTTTGCAGAA
CAAACTGTTACCACCTGTCCCGCACATATTTCACGAGGCCATACAAAGCT
TTTTTTTTTGCGCTTAAAGATTGAGTATCGTAGCCTGGCCTACTTAGAGG
CTGCAGAAAAGAATTTGGTGTCACGCTTACACAAGAATTTGGCGAATAAC
CCCCGAAAAAAAAAAAACGCGTTCCACTTTTGGGAAAATCCCGGAGAATA
GCTGAAAATGTACATTCGCAACAGATAAGAATTTTTAGCTCTTTGCCGGG
ATTTTCCCAAACGAACTTTTTGAGATATTTTTTTTCCCGCATTTATAGGT
AATCGAGAACCACGAAATGACAAAAATTCACGAACTCATCGCCTCCTTGT
AAAACAGACTGAACAACGACAACAATTCAAAGATTATAAAATAGACTTAA
CAACGACAACAATTTAAAGATTAAAAGTGTCAAAACGTCATGTTTGGCTA
ATGACACTGCTGCAAAGTGCTATACTTGTCCACCACTTCTTCCTTTCATC
GTCGACGAAGAATTCGATTCCACCACCACCACCACCACCACTTCCTTTCG
AATGAATATATTGCTGGACGATAATTTCGAATGGCATTATGCTTGCTGGA
CGACATATTCGAATGAATTCAACTTCAACAACCTAGTAACGCATCTAAGC
GGTCTGTGTCTTGCAGTGCAAGAAACGAAGGGCCTCGAAGCCCATTCAAC
GTGGAAAGTTGAGCCGTTTTCGTTCTGTGGCTTGGCATTTATGTGTAAAA
TGGTGCGATATGGGACTTTCAAGCCGCTTCGAGCGATTTAAATCACTTGC
TCGTGTGAATTTTCACTAGTAAACCCACTTGGATGAACAGATGCGTTCGA
AACCAATGACTTTTTACCAATATTGAGTTACACTATATATACTGTTTAGG
AGGGAGAAATGGCCTAAAACCCCTTCAGTGGCCCACAGTAGACCGAGGTA
CCCCCCTAGAAAGGCCCCAATTGATAGAACCCAAACAATGTGTAGACCCT
AAAACAAGAAATCTATTTAGCAGATTTTTTTTTTGGCGGAGATCTGGTGG
CACAGCTTGAATAGCAGCATTTTTAACGCATTACACTACTAAACATGAAG
GTCGGCATGCTTAAATGGCCAAAAATTAAGTATTGGGCCCTTCAACAACC
TTAAAAATGTGTTCTAAGTGTACCTAACTGCATTACCATGCATCATTATG
ATTTTTGGAACTTTTGAAAATTTCGTAAAAATCTTGCCGAATTTCCCATA
GAGGGCCGTACTCTTCAGCCTGACACCAACTAAGAAGGAGCTTGATATTA
GAATTGAAGAGAGTGCTGTGGCACTATTCCGAAGCCCTGACCCTTCTCTG
CTACCCCCTTCGCTGGAAGAAAGTAGAAGAGAACAAGCTGCCATTGGATT
CACCTGCAAACTGCTGGATGGGAGAGGCCGTAGTATGGCCCGCAACTTGA
CCACAGTGTTCTTCCCCAAAACCTTGGAGATCAGCTCGACTTGCTGCAGC
ACGCTATAACAGCACTTTCATCAACTGAAACCATTTCACCTTCCACCCAA
CCCAACTCTCTGGCAACTTTCATCAAAAGATACTATAGAGCTAGAATCCC
GGGCATACGTGATGGAAACAGCAGCAAATACAAGGGCATAACGGGTGATA
ATGGGTAGAGATGTATGGCAACAAGTTACAGCAAGCATGTTTTGGTTAAA
TGCTGAAAGACGCAGGGAAAAGAAAAATACCACGAAAAGCACCTTGTAAT
GTTTTCATTCCTGCTCCATAATACACATATTGGGGGAGTCATAGGTCTGT
GTTTAGTGAAACTACTACAGGGAGATTTTCAGGAATTTTCTTCTTTCATG
GCAGTCGGGCGTGGCGTGTCAAAAGGATCAGATCGATATGGGTATCAACC
TAAGCCCCTTCCAAGGATGATCTGATTATCCAAGCAAACGTGGTTGTTCC
CGACTAAAAGTACACATGACTATAAAGTAGCCTCTGTGCCTCGTTGCATC
TACTGTGGATCTTGACTGGATTTTTTCAAAGAATACCTCTTAGAAACTAT
AGGGGCTGGCTGGGTCTGCAGGCTGGTGCCAGCCGGAAGCGTTTCGAAAG
GCTAGACCTCTAAAGTAAATCAATCTGTTACAATCTATCATCCATCATCA
TCATCATCATCATCATCATTTTCATCATCACAGTATAGTATTATCCGCTG
AAAAATACGAGCATTGTGTGAGTGAGAAGAATACGTTGTGTGTAATGAGT
TGAGATTTTATGGGTTATGAATTTAGTTGCGGACGCCAGGTCCAGAATAC
AGAAGCCAGAAAAGGCTCAAGCAGAAGAAGAAGAATAAATATGAATGATG
ATGATGAAACAAACAAACTTGACTCAGTAAACTTGGTGGCATCGCCAGTT
TGAGTAGCTAGATGAGAGTTCCTCTCTTGTAGTTAGAAGAAGAGGAAGTA
GATACCCAAATGTCTGAAGAGAACACAAAGATCTGAATATATAGTGATGC
TGCGCCCATAGCAGAGTTATGCTTCATGGGGCCATGCAGAACGAGATAAA
ACCAAGAAAGGCTTCGGTCTTGGGTTGCACAGCGCATAGCTTCAGGAGGC
TTTATCAAGGGGGCTTGAAGTTAAGCTGTCACGAAAGCAGAAGTGTGAAG
ACGTCGTGGGGCACACTAGAAGAAGGCAAAGCAAGGCCGAAAAATAACAA
CGCCCCCCCTCACCACGGCAGTCTTCAAAGGGAGTTAGGAGGAATCCTCA
CTGGAGTAAGGAAACTCGAAGAACTTGTAGCTTGGTACCGTGTTGCACTC
GAAGAACTCGGCACAATCGCGAGGAGATGGAGGAGCAGGGAGAGCCGATG
GACGTGATGGCCCAGGGGTAGGAGGACGAGCGGCCGCACTTGGTGCTGCA
GCTGCAAGGAGAGTAGTTTGTCTCCGAATACCGGCATGTGAGGCATTTTT
AGCACTATCAGCACGACTATGGGGAGGACGGGGCTCTCTCTTGGGATGAG
CAGGTGTGGCCGCATCAATCTCCTCAATCTGAGCCTGAAGGTCGCGGCGT
CTCAGAAAGCAATGGCTAGAGGTGTGCTTCTTACGCCCGCAGTAGTCGCA
GCCATTGGTTCCATATTGGTTCTTTCGAGGTGGTTGGGGAGCTGGAGCAG
GAACATTCCGAGACTGAGTCGTAGACTGAGGGTTCAGAGGTCCAGTCTTA
GGGCGTTCAGGTTCTGCCCCATAGTTGATGTTGTAGCCATGTCTAGCCAG
GAGGGCATGGGCAGCGTGAAGGCGGCTCATAGTGGTGCCGGCGCGATTGT
CAAGCTTGCGCTCCAGTATGATGAGTTCGGTTGCAATGTCGGCTGGTGAA
TACTTCTTGCCAGTCTCATCTGAAGTCCATTTGTCCAGCTGTATAGGATA
GTCTTCTTGGTCGATACCACAAAAAAGAACACCGGAAATCTCATTGTCCG
TGATCTGCATGCCAGCAGCGCGAATCTTCTTGACCAAAGCAAAGACCTTC
TCAGTGATGAACTTCTTCATCGAGCTGCAACGCTCACGAGTAAGGGTATT
CTGTAGCTTCATGCGTAGCTTAGCTGGGTTGTGCACGGAGATCGGACTGA
GGTGCTTGACCACCTCTGCCCAGACTTCAGGGCAGGTAAGTTCGTAGATC
TCGTCCTCAGTCTTGCCATGGAACAAAGAGTTAAACGTGTTCCTCAATAC
TTCGTGACAGATAGAGATGAAGTGGAAACTGCCTTTCGGTTTGGGGTTAG
CGTCAGGACGAACATAATGCAGAAGCTTGTTGACTCCTAAGAGCCGCCTC
AATGCAGAGAGTTGTTTGTCAGGCTTGGAGGACAAACTAGCGACCCGGTC
AATTTGTGAAACTGAGGATGTACGGGATTGGTCGTCTTCAGAATCTGACA
TCGTCCTTCAGCCGGTTCTTGTGGTATGTAGATAAATCCTGTGGGTCCAT
AACCGTTGTGTGTAATGAGTTGAGATTTTATGGGTTATGATTTTATAGTT
GTGGACGCCAGGTCCAGAACACAGAAGCCACAAAAGGCTCAAGCAGAAGA
AGAAGAATAAATATGAATGATGATGATGAAACAGACAAACTTGACTCAGT
AAACTTGGTGGCATCGCCAGTTTGAGTAGCTAGATGAGAGTTCCTCTCTT
GTAGTTAGCAGAAGAGGAAGTAGATACCCAAATGTCTGAAAACACAAAGA
TCTGAATATAGTGATGCTGCGCCCATATAGCAGAGTTATACTTCATGGGG
CCATGCAGAACGAGATAAAACCAAGAAAGGCTTCGGTCTTGGGTTGCATA
GCGCATAGCTTCAGGAGGCTTTATCAAGGGGACTTGAAGTTAAGCTGTCA
CGAAAGCAGAAGTGTGAAGACGTTGTGGGGCACACTAGAAGAAGGCATTG
CAAGGCCGAAAAGAAACGAGACAGCAAAATAGAGAGGGAGGGGAGGGTAA
GAAGGTAAAGGGGGGGGAAGGGGGGTATATTCCATTAGTTGGCCTTTAGG
GTTTCATTTAAAAAAAGAGGGGCTAAGGTGCAAGATGGAATGAAAAGGGA
GCTTCAGGCTGACGTTTGGCCTTTGAGGGCTGTAGAAAGAGAGGAGAAGA
AGGACAATGTATACGCTATTTTTAAAGAGACAGCTTTGTAAGAAGTGGTT
ATCTAAGGTGCAGGGGCTATATGGCTGATGGAGGACTGAAAAGGGAGCTT
CGGGCTGACGTTTGGGATCTGGGGCTGTTTTTGAAAAAAGGGGAACAAAA
GGCCATGGTGACATATCTAATGTGATGTTATATCTCAGAGTGCCATTGTA
ATGTAAGAGCATGCAAAGTATTAGGGGCGAGTGACAATATCCATATGTAA
GCTAAACTTTTGTAACAATAGGCATGTAAAGCCATGCAATCAATGCATAA
CTGCTGTCAGAGAGTAAGAACCACGCTCGTATATTCCAGATACTGTATAC
CAGTTTGCATTTGAATCACGTGCAGGGGGGTCATTCTTTAAGCAACCTGC
ACACCTCCCACACCTATTCAGATTTTTCGTCGAAAGTCAGAAGAGGGGGC
ATCGTCGTCATATATCAAAAAAGTATCGTCGCCGCACAATGTTTTTTGAT
TTTTTTTGGTCTAGCCCTTCAATTTTTTTTTACTTTTATCTTGTCCTATC
TTAAATTCGGGAGTGTATAGGAATCCTATGTTCTTCTGGTGTAGTCGATA
GAGCGCTCGACTTCGATGCGCGAGGTCACTGGTTCGATCCCTGGCTTAAG
CTTACCGCCTTCACGGGCAAATAGCGAAGCTTGGTGTCTCGGTGATTTCC
GTGTCCGTGTCGTAAGAACAAGGTCTATCGCTGGCGGGCGCTTACTCAGT
GAAAATTCCAGGAATTGGAAAGTTCTTCGGAACTTGTGCGAATTCCTCGG
AAAATTCCCTGAGGGCTGCGCGGAATGTCCTCGCGTTAGCTGTAGACGAT
CGATGATCCACGCAAGTGGCGGTTGTTGAAACATGAGCACTACCTACTGT
TCATGAGGCCGGTTTGTGGAAGTTACATTCCATAAGCTTGAAAAACGGGC
TAGGAAGGAGCACACTCGTGTTCGAACGAGAGGGAGACTGACCATGTCTA
TGGGAACTTCCTCGACTCGCAGGGTGGAGACAGATGCACTCGTCGATGGA
TGTGAGTTGTCGGAGGAAGCGCCTACGGTAGAGACAACTGAAAGAGGGAG
ATGAGGCCAAGGACAATAGAGCATGTAGGGTTAAGGATAGCTGGAACTTC
GGTCGGTCAGTAATCACACTTAGCTCGAAGAAATGCATCAGATGTCAAGG
CAGCCTGCAAATAGACGGTGGTTGTGTGGTTCAGGATGTGAAGGAACACA
TTGCAAGTAGAACGTATACAAAAAAAAAAAAAAAAAAAAAAATGCCGATG
AATCTTGTCTTTTTTATGAATATAAAACTATTTGTGACCTTTTGTGTTGG
CTGTAACTTTTTTTGGTGTGGGACACACTAAATTCACTCTCTTGCCGCAC
CTCGATTGAGGTGTGCTGGCACTTTCCATCAGCGGAAGAGCGTTTTAGGT
GTGGCAAAACAGCTCCTTATAAATGATATTCTGTTCATTTTTTTTCACTT
TATTTTTTTTGTCTATTTTCTCAACCCATCAACTATTTTTTTTTTTGTAA
AATGAAAGCTTTTGTATTAATAATCTTGTTTTTGTTCTGGTTTTACCATC
TTCCCCATATTTTTCTGTCATTGTGTCTGCATGGTCGCTCTCTCTCTTGT
GACCTTCTCGCATTTTTGGTGTTTTTTTTGGTGTGGTGAGACTTCCTCTT
CTTCCCAACCTCTCTTGGTGGCTTGTTGGGGCGAGAAGGGAGGAGGAGGA
GGAATTGCTGCCTCCCTGCTGCTGCTGCTGCTGCTGCCTCCTTGACACAA
AAGGCAAATACAAAGTCCGGCTGTATAATATATCTTGCATGTGTATTGAA
GAAACAGAATCTAGGCACAGATCGCAGGTCGGTTCAATGAATTTCTCACT
GCAGCTTTGGTGCAGAATTCTCTATTTGCATTTTTTGGGGGGACTGGTCA
TGGCCAGGCTAAGACCGGACGCCATGGTACAGGCCACAATCTTCGAAGAC
CTGACCTGCCTGCCGGCATTCATCACGACATTGGCCTTTTCTTCAACACA
CCGGGCGTGTTGAAAGACGATGCTAAATTTGAAATCCTCAAAGATGGCAC
GTCGTACCTGCCGGATAATTATGTTTTTCCAAAAATGCAAGATGGTTCTC
ATTGCTCCTGGAACTATCTGAAGCTCTACCCTTGGCTTAGGTTCTCACAC
ACCCAGAACAAGGTGTTTTGTGTTTACTGTGTTCTGTTCAGCACCAATCA
ACTAAGGAATTGTTTTCATAAGGACCTCCAAAACTACAATCAGCTGACTT
TTCTTAGCAAAAAACATGCCAAAGTAGATGAAAGTTATAAGAAGTCTGAA
CATTTGAAGTGTGCAGAACGGGCTATTGAATTTGTTGCAGTGATGGATGG
TAAAGCTCTTTCAGTTCAGATTCAGTTGCCAGAGCTTTGAAACTGTTTTG
GCCTTCCAACTTGCTCTTCAAAACACCCAAAAAAATCGGGGGGCTCCGCC
CCCCCCCCGCTGAGGGAGATCCTCCCCCTCAGACTCCCCCTGCTGGAGGT
TGCACCCCCAGAGCCCTGCCACACCTATTCAGTGGCGTCTAACGACGCCC
CTGACATGTGCACATGGTACAGGCCACAATCTTCGAAGACCTGACCTGCC
TGCCGGCATTCATCACGACATTGGCCTTTTCTTCAACACACCGGGCGTGT
TGAAAGACGATGCTAAATTTGAAATCCTCAAAGATGGCACGTCGTACCTG
CCGGATAATTATGTTTTTCCAAAAATGCAAGATGGTTCTCATTGCTCCTG
GAACTATCTGAAGCTCTACCCTTGGCTTAGGTTCTCACACACCCAGAACA
AGGTGTTTTGTGTTTACTGTGTTCTGTTCAGCACCAATCAACTAAGGAAT
TGTTTTCATAAGGACCTCCAAAACTACAATCAGCTGACTTTTCTTAGCAA
AAAACATGCCAAAGTAGATGAAAGTTATAAGAAGTCTGAACATTTGAAGT
GTGCAGAACGGGCTATTGAATTTGTTGCAGTGATGGATGGTAAAGCTCTT
TCAGTTCAGATTCAGTTGCCAGAGCTTTGAAACTGTTTTGGCCTTCCAAC
TTGCTCTTCAAAACACCCAAAAAAATCGGGGGGCTCCGCCCCCCTAACCC
CCCGCTGAGGGAGATCCTCCCCCTCAGACTCCCCCTGCTGGAGGTTGCAC
CCCCAGAGCCCTGCCACACCTATTCAGTGGCGTCTAACGACGCCCCTGAC
ATGTGCATATACATATACATCTCCCCCTCCATATGTTAGAAACAACACTG
TCTTGTACTCACTGATGATGGAAGCGGTTTTACTGTTCAATCTACATAAT
ATATGTACAATAACATAATAATTTATTGCGTAGAAGGAGCACATCATTGC
ATGCAAAACCACCTAATACAGCCCTCCCCCCTTCCGCTGCCCCCATCATC
ATTTAGGGCTATGCCCTAACCTGCATGACCTTCCCCCGGAGCGACTGCAC
CATCATGAGCATCACTGAGGACGAGCTTGTCGACGCGCAGTTCTCTGGGC
GGAGCTAGTTTCCCCCTCTCCAAGCTGCTACTGGAGTGGCACAGCAAGCA
AACCAAGGCGCCCACCCCCTCACCTGTCGTCATCTTTGATCTCTTGACAC
AACAAGTACTACTTCTAATGGGGTTATGATCTTTGAACCCAATAAGGCAT
AGTAGTAGTAGTGGAGTTATTGGGCAACAAATAAAAAACAACAAGATAAC
AACAACAACTACTACTTGTTTTTTCTTCAGCAGAGTGACTAATAATGTGT
AACCACCACCACTACATACAGAAGATGGTGGGGCGGCTGTGGTGGTGATG
ATGGGGCGCAATCATCAGCAAAGACAGTTTCGGGGAACAGCCTGTGGTGA
ACGGGTTGCTGGGGAGGGGGGGAGCAGTGGTGTTTTGAGTCAATATTATT
TAGTGGTGATGATGGGGCGCAATCATCAGCAAAGACAGTTTCGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1237:229419..241462-

>mRNA_H-akashiwo_Contig1237.4.1 ID=mRNA_H-akashiwo_Contig1237.4.1|Name=mRNA_H-akashiwo_Contig1237.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=462bp|location=Sequence derived from alignment at H-akashiwo_Contig1237:229419..241462- (Heterosigma akashiwo CCMP452)
ATGATTTCTAGGTGCCTCGTTTTACTTCTATGCATGATCGCGTGCGCTCA
AAATGAGGCTTTTGTGACCAATGCAAAGCAGTCAAGCTTCAGTGCTAACA
AAGGCCCCGTTGTTTTGAAGACAAGAGTAAAGAGCTCTAGAATTGTTCCA
AAGGCGCACCAGGTCACGATTGAGCATGAAGGCACTACCACGGTCCTTGA
GGTTCCAGAGTACACTTCAATTCTAGATGCCGCTTTGGATGCTGGGATTG
ACCTCCCCCACGACTGCAAGCTGGGCGTGTGCCTGACCTGCCCGTCCAAG
GTGGTCTCCGGCGAGGTGGACCAGAGCGACGGCACCCTGGAGGACTCCGT
GACGGCCCAGGGCTATGCCCTAACCTGCATGACCTTCCCCCGGAGCGACT
GCACCATCATGAGCATCACTGAGGACGAGCTTGTCGACGCGCAGTTCTCT
GGGCGGAGCTAG
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