mRNA_H-akashiwo_Contig1229.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1229.4.1
Unique NamemRNA_H-akashiwo_Contig1229.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A7S3XYN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYN0_HETAK)

HSP 1 Score: 287 bits (735), Expect = 7.320e-96
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED
Sbjct:    1 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 156
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: D8LAT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT7_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.870e-44
Identity = 84/156 (53.85%), Postives = 116/156 (74.36%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFGK K  A P A +T  TI++LR T+++LDKRE  I  KI  Q  +AKAK   KD+RGA+F LKRKKMYE E++KLNGA++ LE QI ALEG+++N + F A R+   A++ ARG +D D V++ +DDI +EM++A +IG+AI+RPA +LF+D
Sbjct:    1 MNLFGKAK--AKPQAADTTSTILKLRETLDSLDKRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDD 154
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A836CAA0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.730e-43
Identity = 85/156 (54.49%), Postives = 117/156 (75.00%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFGKKK AA    T+   TI++L+ TI+TL+KRET +  KI  Q  EAKAK  + D++GA+F LKRKKMYE EI+K+NGA++ LEQQ  ALEG++ N + F+A  +   A++AARG +D D V+  +DDI EEM++A++IGEAI+RPA+ LF+D
Sbjct:    1 MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAK-SQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDD 155
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A7S4E5K0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5K0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.280e-41
Identity = 82/158 (51.90%), Postives = 110/158 (69.62%), Query Frame = 2 
Query:  143 MNLFGKK--KKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFG++  K    PA+ + A TI+ LRGT++TL+KR+  +  +I +Q  EAKAK+ KKD+RGA+FCLK+KKMYE EI+KLNGA+L LE QI ALEG   N +   A ++   A+K AR ++DAD V + +DDI EEM  A+EI  AIS P  +L  D
Sbjct:    1 MNLFGRRRSKPRGAPASKDPAQTIVSLRGTLDTLEKRQAHLDKQIAKQVAEAKAKMAKKDKRGALFCLKKKKMYEAEIEKLNGARLTLESQIIALEGTVTNADTVAAMKSGATAMKHARADVDADAVGDLMDDIQEEMATADEISAAISAPGGDLLGD 158
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A7S3NK50_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK50_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.820e-40
Identity = 82/159 (51.57%), Postives = 108/159 (67.92%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAATNTAD---TIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFGKKK A         D   TI++LR T+ETL+KR+  +  KI QQ  EAK K+ KKD+RGA++CLKRKKMYE EI+K+NGA+L LEQQ+ A+EG   N+E  +A  A   A+  AR  +  D V E +DDI +E+E AN+I EAIS PA ++ +D
Sbjct:    1 MNLFGKKKAAGSGTGGGNVDPAQTILQLRNTVETLEKRQVHLDKKIEQQLAEAKVKIAKKDKRGALYCLKRKKMYEGEIEKINGARLTLEQQMIAIEGTVTNSETVKAMTAGKDAMAKARAGVTVDDVGELMDDITDEVEQANDIAEAISAPANQVLDD 159
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A7S2B2J5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2J5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 8.440e-40
Identity = 83/166 (50.00%), Postives = 109/166 (65.66%), Query Frame = 2 
Query:  143 MNLFGKKKKA----------AVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MN+FG+ +            A  AA + A  I++LRGT+ETLDKRE  I  KI  QT EAKAKL KKD++GA+ C+KRKKM+E EI K+ GA++ LEQQ+ ALE A +N + F A      ALKAARG +DADT+ +T+DDI EEM+ A+ I  A+  P  +  ED
Sbjct:   40 MNIFGRPRNTGGGGGKQPVRARQAAPDAAQAILKLRGTVETLDKREAHIGTKITAQTAEAKAKLAKKDKKGALICMKRKKMFENEITKIQGARMTLEQQMMALENAAMNMQTFGAMNEGKQALKAARGGMDADTIGDTMDDIREEMDEADAIATALGAPLDDALED 205
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A7S3MC89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MC89_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.170e-38
Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFGKKK  A PA  +  DTI  LR  +  L+KRE  I  KI     EAK K  KKD+ GA+F LKRKKMYE E+ KL GA++ L+ QI ALE A +N E F+A ++   A+K  RG+ID+D V++ +D+I EE ++ + I EAISRP Q+LF D
Sbjct:    1 MNLFGKKKPTAAPAP-HPVDTIKMLRDNLLVLEKREEHIQKKIEMALTEAKQKSAKKDKNGALFALKRKKMYEAEVSKLQGARITLDSQILALESAAVNIETFKAMKSGANAMKGLRGDIDSDKVDDIMDEIQEEKDIHDSISEAISRPGQDLFND 155
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: F0YIX7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIX7_AURAN)

HSP 1 Score: 140 bits (353), Expect = 3.880e-38
Identity = 78/157 (49.68%), Postives = 105/157 (66.88%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAA-TNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFG+KK  A P   ++ A TI++LR T+ETL+KR+  +  KI QQT EAK K+ KKD+RGA++CLKRKKMYE EI+K+NGA+L LEQQ+ A+E    N E   A ++   A++AAR N+DADTV + +DD             AIS PA ++  D
Sbjct:    1 MNLFGRKKSPAAPGGPSDPAQTILKLRSTVETLEKRQVHLDKKIEQQTKEAKEKMGKKDKRGALYCLKRKKMYEAEIEKINGARLTLEQQMIAIEATVTNAETVNAMKSGAKAMQAARQNVDADTVGDLMDDXXXXXXXXXXXXXAISAPANDVLND 157
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A482SS87_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS87_9ARCH)

HSP 1 Score: 139 bits (351), Expect = 8.860e-38
Identity = 78/157 (49.68%), Postives = 107/157 (68.15%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVPAATNTA-DTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFED 610
            MNLFGKKK+A  P  T +  +TI +LR ++  L+KRE  I  KI     EAK K +KKD+ GA+F LKRKK+YE E+ KL GA++ +E QI +LE A +N E F+A +    A+KA RG+IDAD V++ +D + EE ++ + I EAISRP Q+LF D
Sbjct:    1 MNLFGKKKQAQQPVPTQSPIETIAKLRESLNILEKREEHINKKIDASLQEAKLKSQKKDKNGALFALKRKKLYEAEVAKLQGARITMETQILSLESASVNIETFKAMKTGANAMKAMRGDIDADKVDDVMDALAEEKDIQDAISEAISRPGQDLFND 157
[Close]
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Match: A0A024GI76_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GI76_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.360e-37
Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 2 
Query:  143 MNLFGKKKKAAVP-AATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPA-QELFED 610
            MNLF +K  ++    ++ TADTI +LR  ++TL+KRE  I  K+  Q  EAK K   KD+RGA+F LKRKKMYE EI+KL GA++ LE QI  LE AH+N E F A R+  G +KA  G I  DTV+  +DDI EEM  A+EI  AIS+P   EL++D
Sbjct:    1 MNLFRRKTASSHQNTSSQTADTIKKLREQLDTLEKREQHICTKVSSQLQEAKKKSAAKDKRGAIFALKRKKMYENEIEKLQGARMTLETQIMTLESAHVNMETFNAMRSGAGQMKAIHGQISVDTVDNIMDDIQEEMATADEISRAISQPVGTELYDD 158
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1229.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XYN0_HETAK7.320e-96100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LAT7_ECTSI1.870e-4453.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAA0_9STRA3.730e-4354.49Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S4E5K0_9STRA5.280e-4151.90Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3NK50_9STRA2.820e-4051.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2B2J5_9STRA8.440e-4050.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3MC89_9STRA1.170e-3851.28Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0YIX7_AURAN3.880e-3849.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482SS87_9ARCH8.860e-3849.68Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A024GI76_9STRA1.360e-3751.27Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1229contigH-akashiwo_Contig1229:163949..165335 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LAT7
Preferred nameCHMP4C
PFAMsSnf7
Model size611
Max annot lvl2759|Eukaryota
KEGG koko:K12194,ko:K16075,ko:K17085,ko:K19306
KEGG TC1.A.35.5
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000278,GO:0000280,GO:0000281,GO:0000815,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000920,GO:0001894,GO:0001919,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006950,GO:0006996,GO:0006997,GO:0006998,GO:0007009,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008333,GO:0008356,GO:0008565,GO:0008593,GO:0009056,GO:0009057,GO:0009268,GO:0009405,GO:0009628,GO:0009653,GO:0009838,GO:0009892,GO:0009894,GO:0009895,GO:0009898,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010035,GO:0010038,GO:0010226,GO:0010256,GO:0010324,GO:0010389,GO:0010458,GO:0010467,GO:0010506,GO:0010507,GO:0010564,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010941,GO:0010948,GO:0010972,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016241,GO:0016242,GO:0016322,GO:0016358,GO:0016485,GO:0017145,GO:0019058,GO:0019068,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030117,GO:0030154,GO:0030163,GO:0030182,GO:0030425,GO:0030447,GO:0030496,GO:0031090,GO:0031175,GO:0031224,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031468,GO:0031505,GO:0031967,GO:0031975,GO:0031982,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032886,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034059,GO:0034613,GO:0034622,GO:0035690,GO:0036176,GO:0036177,GO:0036178,GO:0036257,GO:0036258,GO:0036293,GO:0036294,GO:0036438,GO:0036452,GO:0036477,GO:0039702,GO:0040007,GO:0040008,GO:0040012,GO:0040017,GO:0042058,GO:0042059,GO:0042078,GO:0042221,GO:0042493,GO:0042551,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043328,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044088,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044878,GO:0045047,GO:0045169,GO:0045184,GO:0045229,GO:0045324,GO:0045746,GO:0045786,GO:0045926,GO:0045930,GO:0046605,GO:0046618,GO:0046755,GO:0046907,GO:0046983,GO:0048132,GO:0048285,GO:0048468,GO:0048469,GO:0048475,GO:0048477,GO:0048518,GO:0048519,GO:0048523,GO:0048524,GO:0048583,GO:0048585,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051117,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051258,GO:0051259,GO:0051260,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051493,GO:0051503,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0060236,GO:0060249,GO:0060255,GO:0060548,GO:0061024,GO:0061640,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070482,GO:0070507,GO:0070676,GO:0070727,GO:0070887,GO:0070925,GO:0070938,GO:0070972,GO:0071214,GO:0071241,GO:0071248,GO:0071285,GO:0071453,GO:0071454,GO:0071467,GO:0071554,GO:0071555,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071852,GO:0071944,GO:0071985,GO:0072594,GO:0072599,GO:0072657,GO:0072665,GO:0072666,GO:0080171,GO:0090148,GO:0090150,GO:0090169,GO:0090224,GO:0090543,GO:0090611,GO:0097320,GO:0097447,GO:0097458,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098722,GO:0098728,GO:0098796,GO:0098805,GO:0098813,GO:0104004,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140014,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902115,GO:1902116,GO:1902186,GO:1902188,GO:1902749,GO:1902750,GO:1902902,GO:1903047,GO:1903900,GO:1903902,GO:1904669,GO:1990635,GO:2000785
Exons4
Evalue8.02e-46
EggNOG OGsKOG1656@1|root,KOG1656@2759|Eukaryota
EC2.1.1.309
Descriptionvacuolar transport
Cds size468
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387126.7766395-CDS-H-akashiwo_Contig1229:163948..1640571681387126.7766395-CDS-H-akashiwo_Contig1229:163948..164057Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1229 163949..164057 -
1681387126.7870002-CDS-H-akashiwo_Contig1229:164467..1646451681387126.7870002-CDS-H-akashiwo_Contig1229:164467..164645Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1229 164468..164645 -
1681387126.7950876-CDS-H-akashiwo_Contig1229:164868..1649451681387126.7950876-CDS-H-akashiwo_Contig1229:164868..164945Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1229 164869..164945 -
1681387126.8032074-CDS-H-akashiwo_Contig1229:165089..1651931681387126.8032074-CDS-H-akashiwo_Contig1229:165089..165193Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1229 165090..165193 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387126.8112297-UTR-H-akashiwo_Contig1229:165193..1653351681387126.8112297-UTR-H-akashiwo_Contig1229:165193..165335Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1229 165194..165335 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1229.4.1prot_H-akashiwo_Contig1229.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1229 163949..165193 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1229.4.1

>prot_H-akashiwo_Contig1229.4.1 ID=prot_H-akashiwo_Contig1229.4.1|Name=mRNA_H-akashiwo_Contig1229.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=156bp
MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEA
KAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINT
EAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPA
QELFED
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mRNA from alignment at H-akashiwo_Contig1229:163949..165335-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1229.4.1 ID=mRNA_H-akashiwo_Contig1229.4.1|Name=mRNA_H-akashiwo_Contig1229.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1387bp|location=Sequence derived from alignment at H-akashiwo_Contig1229:163949..165335- (Heterosigma akashiwo CCMP452)
GAAAAAATCCAAATCATTTTTCATTTTCACCCATCGTTCACTATATAGTA
GTGTTAGTGCATTGGCCTTTTAGCTGTGAATCTTGACCCAAGCCCTAGAA
GTCGATAGCTTGGAACTTCGATTGCCATAAAAGCTAGACAAAATGAATTT
GTTTGGGAAAAAAAAGAAAGCCGCCGTGCCTGCAGCTACAAACACTGCCG
ACACGATCATTCGGCTGCGAGGAACAATTGAAACCTTGGATAAACGGTCT
GACTTTTCCATTTTTCTCTCCATTCAGCCATTCTTCCAGTAAAATAACTA
CAACATTTCTGTATTTAGAGATGTGGTTTTTTAATGCTTTTGACGGCAAC
ACTTGTTGACTCTCACCGATGATGTCTTTGTGCTTCTCAGAGAAACCTTC
ATCGCAGCAAAAATAGTTCAACAAACAAATGAAGCAAAGGCCAAGTTGAA
GAAAAAAGACCAACGAGGTAATTGGGAGTACTTGTCCAGCCTGGCTAGTT
GTGTGCGTACGTGAAAAGGGACTAGGGTGTGTTTTCTTTTCAATGTCCAT
GCCATGCCTCACTGTAACTAAACTTAACTATAATCAATATAAATATACTA
TATATCGCCATATTTTTCTTGGACTTTGTCTTCATATATCCAGGCGCAAT
GTCGCCATATTTTTCTTGGACTTTGTCTTCATCTATCCAGGCGCAATGTT
CTGCTTGAAGCGTAAAAAGATGTACGAGAAAGAGATCGATAAACTCAATG
GAGCAAAACTTCAGTTAGAACAGCAAATATTTGCCTTAGAAGGCGCACAC
ATTAACACTGAAGCATTTGAAGCTTCAAGGGCAGCTGTAGGTGCCCTGAA
GGCGGCACGGGGCAACATGTAAGCAAAATATAAACCTGACAAACACTTAT
ATAGTAGGTTTAGGGCTCGAGAGACTGTAGTGATGGTGGCAAGTCTCTCT
CTTGATATCTACCCTTTCCCCCAACCATCTGGACCTATGATGTCTGGCGA
CAGCAAATTACCCGCTTCAACCAGTCTTCCAGTGATGATGATGCTGCAGG
AGGAAACACTTGAATGGCCCATCATGAAGCACTCGCATATAAATTATACA
TATATTACGACTTTTATTGACAATATAGAAGATGCACCGAGCTGTAAGCT
TCTTGCTAAGAAAGTACCAGGGAACAGCACGGCAATCAAAAAGCCCCAGC
AGACCCCCCTTCCCTAAGTTAAGTCTTGCCCGCTTCCTCACTGTTTCCTT
CCCCCTTCCCCCCCGCGGACGGGGCCAGCGACGCGGACACCGTGGAGGAG
ACCCTGGACGACATCAACGAGGAGATGGAGCTGGCCAACGAGATCGGGGA
GGCCATCTCCCGGCCCGCCCAAGAGCTCTTCGAGGAT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1229:163949..165335-

>mRNA_H-akashiwo_Contig1229.4.1 ID=mRNA_H-akashiwo_Contig1229.4.1|Name=mRNA_H-akashiwo_Contig1229.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=468bp|location=Sequence derived from alignment at H-akashiwo_Contig1229:163949..165335- (Heterosigma akashiwo CCMP452)
ATGAATTTGTTTGGGAAAAAAAAGAAAGCCGCCGTGCCTGCAGCTACAAA
CACTGCCGACACGATCATTCGGCTGCGAGGAACAATTGAAACCTTGGATA
AACGAGAAACCTTCATCGCAGCAAAAATAGTTCAACAAACAAATGAAGCA
AAGGCCAAGTTGAAGAAAAAAGACCAACGAGGCGCAATGTTCTGCTTGAA
GCGTAAAAAGATGTACGAGAAAGAGATCGATAAACTCAATGGAGCAAAAC
TTCAGTTAGAACAGCAAATATTTGCCTTAGAAGGCGCACACATTAACACT
GAAGCATTTGAAGCTTCAAGGGCAGCTGTAGGTGCCCTGAAGGCGGCACG
GGGCAACATCGACGCGGACACCGTGGAGGAGACCCTGGACGACATCAACG
AGGAGATGGAGCTGGCCAACGAGATCGGGGAGGCCATCTCCCGGCCCGCC
CAAGAGCTCTTCGAGGAT
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