mRNA_H-akashiwo_Contig1226.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: A0A7S3XKA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKA2_HETAK) HSP 1 Score: 255 bits (651), Expect = 2.180e-84 Identity = 127/162 (78.40%), Postives = 130/162 (80.25%), Query Frame = 1
Query: 46 LGSPCYFLLCVVFQPWSEVSGKEYAFWFCHRKDEQRRRCLSPGGLPRQVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLKKK 531
LG F F + + F F + PGGLPRQVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLKKK
Sbjct: 15 LGLLAIFSCVSSFSHGVKSPARNMRFGFAIARMSNEEGVSPPGGLPRQVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLKKK 176
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: A0A835YL21_9STRA (HopJ type III effector protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL21_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.370e-42 Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 181 PRQVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 525
P + F +L + D V FE+TM +I++NY++ KPF NG++ NAAG N GSCKVFSFGKLA L E TL+CFG+HYRDVL+DP G AH NIR+FM GW G+ F EG+ LT K
Sbjct: 9 PSSISAFAARLAQASDAVTFEDTMEVIAANYEFAPKPFTNGDVHNAAGTNEGSCKVFSFGKLAALDEASTLSCFGQHYRDVLADPAGAAHANIRSFMEAGWGGVHFPEGVALTPK 123
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: UPI000248F885 (HopJ type III effector protein n=1 Tax=Aquimarina agarivorans TaxID=980584 RepID=UPI000248F885) HSP 1 Score: 130 bits (328), Expect = 3.660e-36 Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 190 VVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYR-DVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 525
+ DF KLDS P+DV F ETM ++ NY++TE FKNG N A +N GSCK+F+F KL LS + TL CFG++YR DVL +P G+ HGNIRNFM GW GI F EG+ LT K
Sbjct: 3 ITDFLNKLDSVPNDVAFSETMQVVEDNYNFTETAFKNGTTYNEASQNSGSCKLFAFAKLNELSNEATLACFGDYYRKDVLENPTGSDHGNIRNFMKFGWKGIHF-EGIALTKK 114
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: UPI001E439297 (HopJ type III effector protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI001E439297) HSP 1 Score: 129 bits (324), Expect = 1.570e-35 Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 196 DFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 525
DF I+L + PD + F +TM +I +YD+T F+NGE++NAA +N GSCK+F+FG L LSE QTL FGEHYR V++ P GT H NIRNF+ GWNGI F G L LK
Sbjct: 4 DFFIQLSTEPDSISFAQTMAVIDKHYDFTAVAFENGEVTNAADQNNGSCKIFAFGLLHQLSEPQTLQLFGEHYRQVMATPSGTDHQNIRNFLITGWNGIRF-SGNALQLK 112
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: UPI001F36D483 (HopJ type III effector protein n=1 Tax=Sideroxydans sp. MIZ01 TaxID=2764705 RepID=UPI001F36D483) HSP 1 Score: 129 bits (324), Expect = 1.570e-35 Identity = 63/115 (54.78%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 187 QVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRD-VLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLKK 528
++ F +L ++P++V F+ETM II ++YD+ F+NG+L+NAAG+N GSCK+FSF +L L +QQTL+CFG++YRD VL PDG+ H NIRNF+ GW GIEFG G LT KK
Sbjct: 2 ELESFLQRLSTAPENVTFDETMAIIDAHYDFIPTAFRNGQLNNAAGQNNGSCKLFSFARLHGLPQQQTLHCFGKYYRDDVLKHPDGSDHQNIRNFIKTGWAGIEFG-GDALTPKK 115
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: UPI00188129C8 (HopJ type III effector protein n=1 Tax=Cellvibrio polysaccharolyticus TaxID=2082724 RepID=UPI00188129C8) HSP 1 Score: 128 bits (322), Expect = 3.150e-35 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 199 FKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYR-DVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLKK 528
F KL ++P+ V F T+ I SN+DY F+NGE+SNAAG+N GSCKVFSF K+ LSEQ+TL CFG+ YR DVL +P G+ HGNIRNF+ GW+GIEF E LT K+
Sbjct: 6 FLTKLRTAPETVSFNHTIDTIQSNFDYIPTAFRNGEISNAAGQNEGSCKVFSFAKIHALSEQETLYCFGDFYREDVLKNPQGSDHGNIRNFIRHGWSGIEF-ESAALTPKQ 115
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: UPI0016648CA5 (HopJ type III effector protein n=1 Tax=Shewanella inventionis TaxID=1738770 RepID=UPI0016648CA5) HSP 1 Score: 127 bits (318), Expect = 1.430e-34 Identity = 62/115 (53.91%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 187 QVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLKKK 531
QV F LD ++ FEETM +I +NYD+T FKNG+ N AG+N GSCKVF+FG++ L++QQTL FGEHYRDVL+ P G+ H NIR FM GW G+ F + L L LK K
Sbjct: 5 QVSRFIATLDERAHELRFEETMALIDANYDFTPSAFKNGDQLNDAGQNSGSCKVFAFGQIQQLTQQQTLTLFGEHYRDVLATPQGSDHQNIRQFMQHGWAGVLFSQ-LALLLKNK 118
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: A0A2D5GEC6_9GAMM (Type III effector n=1 Tax=Oceanospirillum sp. TaxID=2021254 RepID=A0A2D5GEC6_9GAMM) HSP 1 Score: 126 bits (316), Expect = 2.260e-34 Identity = 57/96 (59.38%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 238 FEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 525
FE+T+ +IS NYDYT F+NGE++N AG+N GSCK+F+F +L L+EQQTL CFG Y+DVL+ P+GT HGNIRNFM+ GW+GI F E LT +
Sbjct: 18 FEDTIAVISENYDYTPTAFQNGEVNNEAGQNEGSCKIFAFAQLNNLNEQQTLACFGRFYQDVLATPEGTDHGNIRNFMSSGWSGIRF-EATALTAR 112
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: A0A1U9L9Q6_9FLAO (Type III effector n=2 Tax=unclassified Polaribacter TaxID=196858 RepID=A0A1U9L9Q6_9FLAO) HSP 1 Score: 126 bits (316), Expect = 2.330e-34 Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 190 VVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 525
+ +FK KL +P + F +TM +I NY++T FKNG + N AGEN GSCK+F+F KL L++++TL CFGEHY++VL D +GT+H NIRNFM G++G+ F E LTLK
Sbjct: 3 IQEFKTKLKLNPSAILFADTMQVIEDNYNFTPTAFKNGTIENKAGENAGSCKLFAFAKLQKLTKEETLFCFGEHYKNVLEDANGTSHQNIRNFMNTGFDGLTF-ESEALTLK 113
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Match: A0A1G3IS42_9PROT (Type III effector n=1 Tax=Sideroxydans sp. RIFOXYB12_FULL_59_6 TaxID=1802155 RepID=A0A1G3IS42_9PROT) HSP 1 Score: 125 bits (314), Expect = 4.970e-34 Identity = 64/113 (56.64%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 190 VVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYR-DVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 525
+ F +L SPD V F+ETM +I YD+T F NG N AG+N GSCK+FSF KL LS+QQTL CFG++YR DVL +PDGT H NIRNFM GW GI F EG L K
Sbjct: 3 LTTFLQRLHDSPDSVCFKETMALIDELYDFTPTAFINGATRNEAGQNNGSCKLFSFAKLHGLSQQQTLTCFGDYYRKDVLGNPDGTDHANIRNFMKSGWEGISF-EGSALKPK 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1226.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1226.3.1 >prot_H-akashiwo_Contig1226.3.1 ID=prot_H-akashiwo_Contig1226.3.1|Name=mRNA_H-akashiwo_Contig1226.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=178bp PIKRIQQNGNLLPSCLGSPCYFLLCVVFQPWSEVSGKEYAFWFCHRKDEQback to top mRNA from alignment at H-akashiwo_Contig1226:184769..185302+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1226.3.1 ID=mRNA_H-akashiwo_Contig1226.3.1|Name=mRNA_H-akashiwo_Contig1226.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=534bp|location=Sequence derived from alignment at H-akashiwo_Contig1226:184769..185302+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1226:184769..185302+ >mRNA_H-akashiwo_Contig1226.3.1 ID=mRNA_H-akashiwo_Contig1226.3.1|Name=mRNA_H-akashiwo_Contig1226.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=534bp|location=Sequence derived from alignment at H-akashiwo_Contig1226:184769..185302+ (Heterosigma akashiwo CCMP452)back to top |