mRNA_H-akashiwo_Contig1225.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK) HSP 1 Score: 493 bits (1269), Expect = 1.310e-168 Identity = 242/264 (91.67%), Postives = 253/264 (95.83%), Query Frame = 1
Query: 34 FFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYSFTDVFTKPQNK 825
F GYDLERDRVAKTIKVTAASKIAHILDQHGLQDVH+KFTPCA GVHMSADSSSE+ DL LYQALVGAFMFVKEFRPDIN+SVG+LSRFL CPNADHMD ALYLAGYLRRTPG+GMVFGGSRDYRIRI+SDSDHGNCPD+GRSTSGIAVF GDSLIIHKSKLQHITTL APEAELVALVLSICEARWVRAMLW+LV AR RMQA+TDCMAVVHMANHQK LQRTRHLNIKRHFLHDEVSEERLSVEHIPGKY+FTDVFTKPQN+
Sbjct: 458 FVGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNR 721
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK) HSP 1 Score: 412 bits (1059), Expect = 9.400e-142 Identity = 195/252 (77.38%), Postives = 228/252 (90.48%), Query Frame = 1
Query: 34 FFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKY 789
F GYD+ERDR AKTIKVTAASK+A +L+ HGL +VH K+TPCA GVH+S+DSS +RVD+ YQ+LVGAF F++EFRPDI+++VG+LS+FLV PN DHMD ALYLAGYLRRT +GMVFGG+RDY +R+VSDSDHGNCPDTGRSTSG+ VFVG SLI+HKSKLQHITTLSA EAELVALVL+ICEA+WV +MLWEL+R RG ++A+TDCMAVVHMANHQKHLQRTRHLNIKRHFL DEVSE+RLSVEHIPGK+
Sbjct: 129 FVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK) HSP 1 Score: 412 bits (1059), Expect = 5.800e-139 Identity = 195/252 (77.38%), Postives = 228/252 (90.48%), Query Frame = 1
Query: 34 FFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKY 789
F GYD+ERDR AKTIKVTAASK+A +L+ HGL +VH K+TPCA GVH+S+DSS +RVD+ YQ+LVGAF F++EFRPDI+++VG+LS+FLV PN DHMD ALYLAGYLRRT +GMVFGG+RDY +R+VSDSDHGNCPDTGRSTSG+ VFVG SLI+HKSKLQHITTLSA EAELVALVL+ICEA+WV +MLWEL+R RG ++A+TDCMAVVHMANHQKHLQRTRHLNIKRHFL DEVSE+RLSVEHIPGK+
Sbjct: 326 FVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK) HSP 1 Score: 412 bits (1059), Expect = 9.710e-137 Identity = 195/252 (77.38%), Postives = 228/252 (90.48%), Query Frame = 1
Query: 34 FFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKY 789
F GYD+ERDR AKTIKVTAASK+A +L+ HGL +VH K+TPCA GVH+S+DSS +RVD+ YQ+LVGAF F++EFRPDI+++VG+LS+FLV PN DHMD ALYLAGYLRRT +GMVFGG+RDY +R+VSDSDHGNCPDTGRSTSG+ VFVG SLI+HKSKLQHITTLSA EAELVALVL+ICEA+WV +MLWEL+R RG ++A+TDCMAVVHMANHQKHLQRTRHLNIKRHFL DEVSE+RLSVEHIPGK+
Sbjct: 502 FVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK) HSP 1 Score: 343 bits (881), Expect = 2.440e-112 Identity = 170/263 (64.64%), Postives = 203/263 (77.19%), Query Frame = 1
Query: 34 FFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGG--SRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYSFTDVFTKP 816
F G DL RDR A+TIKVT +KIA +L++HGL++ H KFTPCA GV MS DS+SE+ D+ YQ LVG F++EFR D ++VG LSR+L CPN DH + A YLAGYLRRT GMVFGG Y IRIV+DSDHG CPDT RSTSG++V++G SLIIHKSKLQH+ TLS+ EAELVAL+L++CEA+WVR ML L R R M A+TD MAVV MAN Q+HLQRTRHLNIKRHFL DEV+E RLSV H+ GK + D+FTKP
Sbjct: 281 FVGLDLSRDREARTIKVTCETKIAQLLERHGLENAHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKP 543
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A7S4DE91_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE91_HETAK) HSP 1 Score: 155 bits (392), Expect = 1.120e-39 Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 1
Query: 34 FFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSV 282
F GYDLERDRVAKTIKVTAASKIAHILDQHGLQDVH+KFTPCA GVHMSADSSSE+ DL LYQALVGAFMFVKEFRPDIN+SV
Sbjct: 458 FVGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSV 540
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A438ICH9_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438ICH9_VITVI) HSP 1 Score: 151 bits (382), Expect = 1.470e-38 Identity = 93/274 (33.94%), Postives = 144/274 (52.55%), Query Frame = 1
Query: 7 QVQVLAHLSFFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQA-HTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYSFTDVFTKPQNK 825
+++ L L +F +E R K I ++ IL G P + +S DS D Y+ LVG +++ RPDI YSV LSRF+ P HM+VAL + YL+ +PG+G+ F D +R SDSD CP + RST+G VF+G SLI ++K Q +LS+ +AE A+ + C+ W+R++L +L ++ + D A +H+A + +RTRH+ + HF+HD++ + + +HI DVFTKP K
Sbjct: 276 RIKDLGDLKYF-LGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNIKLS-DSGELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEVALCVLRYLKNSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAKAECRAMTGTCCKLSWLRSLLKDLRILHPKLALLYCDNTAALHIAVNPVFHERTRHIEMDCHFIHDKIQDGSVVTKHIASTNQLADVFTKPLGK 547
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: UPI000B8C943D (uncharacterized protein LOC110818467 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C943D) HSP 1 Score: 145 bits (365), Expect = 7.050e-38 Identity = 76/221 (34.39%), Postives = 123/221 (55.66%), Query Frame = 1
Query: 154 PCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWEL-VRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYSFTDVFTK 813
P + MS D D+ Y+ L+G +++ RPDI YSV LS+FL P H+ AL + Y++RTPG+G+ F S +I+ SD+D CPDT RS +G VF+G SLI KSK Q + + S+ EAE ++ + CE W+ +L +L V+ +G + D A +H+A++ + +R +H+ HF+ +++ + + HI + D+ TK
Sbjct: 82 PMDPNIKMSKDDGELLSDITSYRRLIGKLLYLIISRPDICYSVNRLSQFLAAPRTSHLQAALRILQYIKRTPGQGLFFPSSSAIQIKAFSDADWATCPDTRRSITGFCVFLGSSLISWKSKKQQVVSRSSAEAEYRSMANTTCEIVWILKLLRDLKVQHQGPALLYCDNQAALHIASNPMYHERIKHIEFDCHFVREKIQDGTVKTMHISTRNQLADIITK 302
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: A0A836DGX9_9ROSI (Mitochondrial protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DGX9_9ROSI) HSP 1 Score: 143 bits (361), Expect = 2.080e-37 Identity = 83/266 (31.20%), Postives = 139/266 (52.26%), Query Frame = 1
Query: 19 LAHLSFF-GYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMSADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWELVRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYSFTDVFTK 813
L L FF G ++ R + I ++ ILD G P +S D + Y+ LVG +++ RPDI YSV LS+F+ P H D AL + YL++ PG G+++ + ++R D++ NCP T RST+G VF+GDSLI K++ Q T+ S+ EAE ++ + CE W+R++ EL ++ + D A +H+A + + +RT+H+ I H + +++ ++ + IP ++ D+FTK
Sbjct: 27 LGKLKFFLGLEVARSKAG--IVISQRKYTLEILDDVGFLGAKPVDFPMEQNSKLSNDQGEILKNAASYRRLVGRLIYLTITRPDITYSVNILSQFMHEPRIPHWDAALRVVKYLKKNPGNGLLYSSNSPLQLRAYCDANWANCPMTRRSTTGFCVFLGDSLISWKTRKQKTTSRSSAEAEYRSMAAATCELTWLRSLFEELQVHFKPIELYCDNQAALHIAANPVYHERTKHIEIDCHVVREKIQAGKIVTKFIPSQFQLADIFTK 290
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Match: UPI0007C160AF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Prunus mume TaxID=102107 RepID=UPI0007C160AF) HSP 1 Score: 144 bits (362), Expect = 6.780e-37 Identity = 92/276 (33.33%), Postives = 140/276 (50.72%), Query Frame = 1
Query: 7 QVQVLAHLSFFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCALGVHMS--ADSSSERVDLGLYQALVGAFMFVKEFRPDINYSVGELSRFLVCPNADHMDVALYLAGYLRRTPGEGMVFGGSRDYRIRIVSDSDHGNCPDTGRSTSGIAVFVGDSLIIHKSKLQHITTLSAPEAELVALVLSICEARWVRAMLWEL-VRARGRMQAHTDCMAVVHMANHQKHLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYSFTDVFTKPQNK 825
+++ L L +F +E R K I V+ IL +G L P + + +D D Y+ LVG +++ RPDI YSV LSRF+ P HMD AL + YL+ TPG+G++F + DSD CP T ST+G VF+G+SLI ++K Q +LS+ EAE A+ + CE W+R +L +L + + G + D A +H+A + +RTRH+ + HF+HD++ + +S H+ D F KP K
Sbjct: 95 RIKDLGDLKYF-LGIEVSRSKKGIYVSQRKYALEILKDYGF----LGARPIDFPMEEAKLSDKGELLKDPQKYRRLVGRLLYLTITRPDITYSVHVLSRFMHQPRLPHMDAALQVVRYLKSTPGQGLLFQSDNKLDLITYCDSDWAGCPITRLSTTGYCVFLGNSLISRRTKRQRTVSLSSAEAEYRAMASTCCEVTWLRFLLQDLHLPSSGASCMYCDNQAALHIAANPVFHERTRHIEMDCHFIHDKILDGTISTWHVNSSQQLADTFAKPLGK 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1225.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1225.2.1 >prot_H-akashiwo_Contig1225.2.1 ID=prot_H-akashiwo_Contig1225.2.1|Name=mRNA_H-akashiwo_Contig1225.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=275bp LIQVQVLAHLSFFGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFback to top mRNA from alignment at H-akashiwo_Contig1225:337987..338811- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1225.2.1 ID=mRNA_H-akashiwo_Contig1225.2.1|Name=mRNA_H-akashiwo_Contig1225.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=825bp|location=Sequence derived from alignment at H-akashiwo_Contig1225:337987..338811- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1225:337987..338811- >mRNA_H-akashiwo_Contig1225.2.1 ID=mRNA_H-akashiwo_Contig1225.2.1|Name=mRNA_H-akashiwo_Contig1225.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=825bp|location=Sequence derived from alignment at H-akashiwo_Contig1225:337987..338811- (Heterosigma akashiwo CCMP452)back to top |