mRNA_H-akashiwo_Contig1225.1.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A7S3Y526_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y526_HETAK) HSP 1 Score: 312 bits (799), Expect = 1.460e-99 Identity = 151/215 (70.23%), Postives = 180/215 (83.72%), Query Frame = 1
Query: 1 KILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
KI++VVL+GGPNGGKTTA QV+PALL+ D LN PKVL IPE PTLIMEMGV+R EEL N +KLLAFQEAV ++Q +EDTTMKLARKLASC ENRARDII++MDRG MDCKGYVP ++WEA+L+ KNT+EEAILARYDAVIH++SVAVE+P LYDEL +N +R E + QAA QD E NSW HPA VI+NGD NW++KVLK++EA+ QAL
Sbjct: 185 KIVKVVLSGGPNGGKTTAIQVVPALLKSDPQLNLPKVLAIPEVPTLIMEMGVHRAEELMTNSEKLLAFQEAVFDVQLALEDTTMKLARKLASCSENRARDIIVLMDRGLMDCKGYVPPHIWEAILLKKNTSEEAILARYDAVIHLRSVAVEDPDLYDELAVSNRVRIENKEQAATQDTTEWNSWIRHPAHMVINNGDDNWAEKVLKVQEAVKQAL 399
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A7S3Y5E0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E0_HETAK) HSP 1 Score: 184 bits (466), Expect = 4.950e-54 Identity = 89/118 (75.42%), Postives = 102/118 (86.44%), Query Frame = 1
Query: 1 KILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPE 354
KI++VVL+GGPNGGKTTA QV+PALL+ D LN PKVL IPE PTLIMEMGV+R EEL N +KLLAFQEAV ++Q +EDTTMKLARKLASC ENRARDII++MDRG MDCKGYVP+
Sbjct: 185 KIVKVVLSGGPNGGKTTAIQVVPALLKSDPQLNLPKVLAIPEVPTLIMEMGVHRAEELMTNSEKLLAFQEAVFDVQLALEDTTMKLARKLASCSENRARDIIVLMDRGLMDCKGYVPQ 302
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A7S2XZZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZZ9_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.480e-29 Identity = 75/215 (34.88%), Postives = 113/215 (52.56%), Query Frame = 1
Query: 1 KILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
K ++VLTGGP GGKT++ V+ + NL + KV+ +PE TL+ G L D ++ +Q +EDT ++ C + R+++++ DRGTMDCKGY P W+ + +E+A+L RYD V+H+ S A+ + Y +NN IR ET QA QD +E SW HP R ++ NG ++ K +I AI L
Sbjct: 47 KPYKIVLTGGPCGGKTSSLDVVRQEIE---NLGY-KVMVVPETSTLLQTGG------LQFRDACRTTLCAKMLTLQVELEDTFERV------CVASGMRNVVLLCDRGTMDCKGYNPPEAWDQAVEQSGYSEQALLERYDLVVHLVSTAIGAERHYTN--SNNKIRVETMEQAREQDFRERQSWVKHPNRVIVHNGC-SFEAKCQRINAAIKSQL 242
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A133QAJ9_9BACT (AAA_28 domain-containing protein n=2 Tax=Prevotella corporis TaxID=28128 RepID=A0A133QAJ9_9BACT) HSP 1 Score: 109 bits (273), Expect = 5.840e-25 Identity = 76/214 (35.51%), Postives = 114/214 (53.27%), Query Frame = 1
Query: 10 RVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQ--EAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
R+VLTGGP GKTTA + ++ S+L + KV IPE PTL + G++ L D K ++ +A +E+Q +E+ M++A L II+ DRGTMD Y+ +W+ + + NT+ E + RYDAV+H+ S A Q Y ANNS RTE A D K + +W GHP VI+N + ++ +K+ + + I L
Sbjct: 3 RIVLTGGPCAGKTTA---LVKIIEHFSSLGY-KVFIIPEVPTLFSQAGMDY-----LTDNKDFFYEGEKATLEMQLALEEKFMRMAETLNV-------PTIIVCDRGTMDISAYMKPEMWQEITLKMNTSSETLRQRYDAVLHLVSAADGAEQFYTT--ANNSERTEGLELARELDKKIIQAWMGHPHLRVINNHE-DFDNKINHVLQEISNVL 197
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A137SZF5_9BACT (AAA_28 domain-containing protein n=5 Tax=Prevotella bivia TaxID=28125 RepID=A0A137SZF5_9BACT) HSP 1 Score: 108 bits (270), Expect = 1.580e-24 Identity = 75/212 (35.38%), Postives = 110/212 (51.89%), Query Frame = 1
Query: 10 RVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
R+VLTGGP GKTTA + ++ S+L + KV IPE PTL + G+ + L N + ++A +E Q +ED M++A E R II+ DRGTMD Y+ + +W + + E + +RYDAV+H+ S A Q Y ANNS RTE A D K + +W HP VI+N + N+ K+ ++ + I L
Sbjct: 3 RIVLTGGPCAGKTTA---LVKIIEHFSSLGY-KVFVIPEVPTLFSQAGM---DYLTSNHQFFFEGEKATLETQIALEDQFMRIA-------ETIDRPTIIVCDRGTMDISAYMNDEMWSEITTSVGVASEILSSRYDAVLHLVSAADGAEQFYTT--ANNSERTEGIELARELDKKVIQAWSEHPHLRVINNHE-NFDTKINRVLQEISSVL 197
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: UPI0003F86F93 (AAA family ATPase n=1 Tax=Prevotella albensis TaxID=77768 RepID=UPI0003F86F93) HSP 1 Score: 108 bits (270), Expect = 1.650e-24 Identity = 76/214 (35.51%), Postives = 112/214 (52.34%), Query Frame = 1
Query: 4 ILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
I ++VLTGGP GKTTA + ++ S+L F KV TIPE PT+ + G+ + L N +++ +EIQ ++E+ MK+A +L III DRG MD Y+ +WE + + RYDA++H+ S A Q Y ANNS RTE A D K +N+W GHP VI+N + N+ +K+ ++ + I L
Sbjct: 4 IKKIVLTGGPCAGKTTA---LVKVIEHFSSLGF-KVFTIPEVPTMFSQAGM---DYLTKNPGFFYEGEKSTLEIQLQLENHFMKMAEQLDM-------PTIIICDRGAMDISAYMKPEMWEEITRAVGQDSNDLRERYDAILHLVSAADGAEQFYTT--ANNSERTEGLELARELDKKVINAWTGHPHLRVINNHE-NFDNKIYRVLKEISNVL 200
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A6A5C1N9_NAEFO (AAA_28 domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C1N9_NAEFO) HSP 1 Score: 110 bits (274), Expect = 2.150e-24 Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 1
Query: 4 ILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALL-MNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKI 621
I RVVLTGGP GKT+A Q + L+ NL F +V IPEA TL+M G T++ + + +LAF+ +++ Q +ED +LA+ + I++ DRGT+D K YV + +W+AL+ MN + + RYD VIH+ + A+ + Y NN++RTET QA D K S+ GHP ++DN ++ +K+ K+
Sbjct: 159 IFRVVLTGGPCAGKTSAMQKLRERLQ---NLGF-QVFIIPEAATLLMTGGAKVTDKSTVEE--ILAFETYIIKTQMAIEDNFRELAKV-------SKKPTILLCDRGTLDPKAYVSDDLWQALMDMNGWSIPQLRDQRYDCVIHLVTTAIGAEKYYTI--ENNTVRTETIEQARELDYKLRASYIGHPQLYIVDNAVNSFDEKLQKV 350
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: I6TUE5_ENCHA (AAA_28 domain-containing protein n=1 Tax=Encephalitozoon hellem (strain ATCC 50504) TaxID=907965 RepID=I6TUE5_ENCHA) HSP 1 Score: 105 bits (263), Expect = 2.160e-24 Identity = 74/214 (34.58%), Postives = 109/214 (50.93%), Query Frame = 1
Query: 1 KILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAIL-ARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQDNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQ 639
+ILRV LTGGP GGKTT + + + +V PE T+I+ GV E +N+ + FQ V+ + R+ED + +LAS GEN +I+I DRG MDC Y+ + W A+ + + RYD VIH+ S A P Y + NNS R+E +A V + + W+GH VIDN ++ K ++ EAI++
Sbjct: 38 QILRVCLTGGPCGGKTT----VQGFVAEEFERMGWRVFRSPEVATIILGGGVKYAE---MNEDRRRRFQVDVLNVMMRIEDVYNGIGGELASRGEN----VIVIYDRGVMDCSAYLDKDEWRAVCSEAGVCSDEVRDKRYDCVIHLVSAAEGAPLYYG--RDNNSARSEDISEARVLEKRTREGWRGHRRVEVIDNST-DFEGKKRRVVEAILK 237
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: A0A095Y5Y2_9BACT (ATPase AAA n=3 Tax=Prevotella TaxID=838 RepID=A0A095Y5Y2_9BACT) HSP 1 Score: 108 bits (269), Expect = 2.530e-24 Identity = 72/220 (32.73%), Postives = 118/220 (53.64%), Query Frame = 1
Query: 1 KILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQ-----DNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
+I ++VLTGGP GKTTA + ++ S+L F KV TIPE PTL + G++ + N + ++A +E Q +ED MK+A ++ +++ DRGTMD Y+ VWE ++ + T+ + ++ RYDAV+H+ S A + Y NS R E + + ++ D K +N+W GHP VI+N D ++ K+ ++ + I L
Sbjct: 3 EIKKIVLTGGPCAGKTTA---LVKIIEHFSSLGF-KVFTIPEVPTLFSQAGMDYLTD---NQRFFYEGEKATLEAQLLLEDKFMKMAEQVEE-------PAVVVCDRGTMDISAYLKPDVWEDIIASIGTSAQQLIDRYDAVLHLVSAADGAEKFYTT--TTNSQRAEQKNEEGLRMARELDKKVINAWSGHPHLRVINNHD-DFDTKLNRVLKEISSVL 205
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Match: UPI001EDA9888 (AAA family ATPase n=2 Tax=Prevotella TaxID=838 RepID=UPI001EDA9888) HSP 1 Score: 107 bits (268), Expect = 3.510e-24 Identity = 76/219 (34.70%), Postives = 115/219 (52.51%), Query Frame = 1
Query: 4 ILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMGVNRTEELGLNDKKLLAFQEAVMEIQTRMEDTTMKLARKLASCGENRARDIIIIMDRGTMDCKGYVPEYVWEALLMNKNTTEEAILARYDAVIHIKSVAVENPQLYDELKANNSIRTETRLQAAVQ-----DNKELNSWQGHPARTVIDNGDGNWSDKVLKIKEAIVQAL 645
I ++VLTGGP GKTTA + ++ SNL + KV TIPE PTL + G+N L N ++A +EIQ +ED M++A++ C E + +I+ DRGTMD Y+ +W + TT + RYDA++H+ S A Q Y ANN+ R E + ++ D K + +W GHP VI+N D ++ K+ ++ + I L
Sbjct: 4 IKKIVLTGGPCAGKTTA---LVRIIEHFSNLGY-KVFTIPEVPTLFTQAGMNY---LTKNKGFFYEGEKATLEIQLALEDKFMRMAQE---CTE---QPCLIVCDRGTMDISAYMSSEIWADITRAVGTTSPELRNRYDAILHLVSAADGAEQYYTT--ANNAQRNEPMTEEGLRIARSLDKKVIRAWNGHPHLRVINNHD-DFEAKMRRVLKEISSVL 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1225.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1225.1.1 >prot_H-akashiwo_Contig1225.1.1 ID=prot_H-akashiwo_Contig1225.1.1|Name=mRNA_H-akashiwo_Contig1225.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=215bp KILRVVLTGGPNGGKTTATQVIPALLRPDSNLNFPKVLTIPEAPTLIMEMback to top mRNA from alignment at H-akashiwo_Contig1225:118970..119614+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1225.1.1 ID=mRNA_H-akashiwo_Contig1225.1.1|Name=mRNA_H-akashiwo_Contig1225.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=645bp|location=Sequence derived from alignment at H-akashiwo_Contig1225:118970..119614+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1225:118970..119614+ >mRNA_H-akashiwo_Contig1225.1.1 ID=mRNA_H-akashiwo_Contig1225.1.1|Name=mRNA_H-akashiwo_Contig1225.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=645bp|location=Sequence derived from alignment at H-akashiwo_Contig1225:118970..119614+ (Heterosigma akashiwo CCMP452)back to top |