mRNA_H-akashiwo_Contig1224.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S0AWU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWU0_9STRA) HSP 1 Score: 364 bits (934), Expect = 4.280e-125 Identity = 177/238 (74.37%), Postives = 201/238 (84.45%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSF---MVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPNVNESKELQRATKIMKVVSYGWIPLV 705
I VIGAGLGRTGTKSLAAALD+LGY+TYHFPLPEHSAAWAAYA GTGS QDAI AV GYNATCDQPMAD QLEM+P+A+V+LTVRDSP+KWA SWK+L+EFI VQE+PFS P F QWIPFM+NWK+MR IMGV LGL PG+LIRG+ SEP GWLE QY AHN V+K VPK+KLLVFNVK+GW PLC++LGKE+P+ PFPNVNESKEL+RAT IMKVVSYGW+P +
Sbjct: 13 IRVIGAGLGRTGTKSLAAALDMLGYRTYHFPLPEHSAAWAAYAKGTGSAQDAIGTAVAAGYNATCDQPMADALQEQLEMFPDAKVVLTVRDSPEKWAASWKILMEFIRVQEQPFSLWRPFYPTFIQWIPFMQNWKRMRDIMGV-HLGLLPGQLIRGHVSEPAGWLEKQYDAHNKTVRKVVPKEKLLVFNVKEGWAPLCKFLGKELPE-EPFPNVNESKELRRATTIMKVVSYGWLPFL 248
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S2Y352_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y352_9STRA) HSP 1 Score: 329 bits (843), Expect = 3.310e-111 Identity = 157/240 (65.42%), Postives = 197/240 (82.08%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVED-GYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSF--MVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPNVNESKELQRATKIMKVVSYGWIPLVAG 711
I+VIGAGLGRTGTKSL+AALD+LGYK+YHFPLP H+ AWA YA G SVQ AI D GY+ATCDQPMAD+F AQ+EMYP+A+VILT+RDS +KW+ S+++LL+FI VQER F+ P F QWIPFM++WK+MR IMG LGL PG+LIRGY + +GWLE QY AHN V+KHVPK++LLVFNVK+GW+P+C +L K++PD PFPNVNES+EL++A+K+MK V+YGWIP +AG
Sbjct: 9 IQVIGAGLGRTGTKSLSAALDILGYKSYHFPLPNHAKAWAEYASGNVSVQSAIQXXXXDAGYDATCDQPMADVFQAQMEMYPDAKVILTIRDSAEKWSTSYQVLLKFIEVQERSFTIWPFYPSFIQWIPFMRDWKRMRDIMGC-HLGLAPGELIRGYKDKEQGWLEKQYLAHNEYVKKHVPKERLLVFNVKEGWKPICEFLDKDIPD-VPFPNVNESQELKQASKMMKFVTYGWIPFLAG 246
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A6S9B0H1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9B0H1_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.260e-98 Identity = 143/239 (59.83%), Postives = 175/239 (73.22%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASE--PEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVP-DGAPFPNVNESKELQRATKIMKVVSYGWIPLVA 708
I+VIGAGLGRTGTKSL AAL+ LGY+TYH+PLP H+ AWA A S D I V DG+ ATCD P ADL+ Q+ ++P+A+V+LTVRDS KWA SWK+L+ FI VQERPF+ P F Q++PFM WK+MR I+G LGLP G LIR ++++ P+ WL QY AHNA V HVP D+LLVFNVK+GW PLC++LGKEVP D PFP VNES EL A K+MK ++Y WIP VA
Sbjct: 21 IQVIGAGLGRTGTKSLQAALERLGYRTYHYPLPSHAKAWAEMAERKRSADDVIDLVVRDGFTATCDNPSADLYQEQMRIFPDAKVVLTVRDSSAKWASSWKVLMSFIEVQERPFTLSYPSFLQFVPFMNAWKRMRGIIGATHLGLPQGALIRSWSNQADPDAWLAKQYEAHNAHVISHVPADRLLVFNVKEGWGPLCQFLGKEVPPDDEPFPFVNESAELALAEKVMKGITYMWIPAVA 259
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S2A9X9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9X9_TRICV) HSP 1 Score: 295 bits (755), Expect = 4.900e-98 Identity = 140/233 (60.09%), Postives = 171/233 (73.39%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPNVNESKELQRATKIMKVVSYGWIP 699
I+VIGAGLGRTGT SL AL+ LGYKTYHF P H+A WAAY+ G D + V+ G+ ATCDQP ADL+ QL YP A+VILTVRDS +WA SWK L++FI VQERPFS P F QWIPFM++WK+MR IMG +GLPPG+LIRG+ S+P+GWL +QY HNA V + VP +LLVFNVK+GW PLC +L K +P+ PFP VNES +++ A K M V+SY WIP
Sbjct: 9 IQVIGAGLGRTGTLSLRVALETLGYKTYHFVHPSHAATWAAYSRGLADSDDILDLIVDSGFTATCDQPTADLYVEQLRRYPGAKVILTVRDSGDRWATSWKTLMDFIEVQERPFSLSYPTFIQWIPFMQHWKEMRSIMGT-HIGLPPGELIRGWRSKPDGWLAEQYEMHNARVMETVPSSQLLVFNVKEGWAPLCDFLEKNIPN-EPFPFVNESSDIEFAWKTMIVLSYAWIP 239
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A5J4YP48_PORPP (Uncharacterized protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP48_PORPP) HSP 1 Score: 295 bits (755), Expect = 7.100e-98 Identity = 142/235 (60.43%), Postives = 174/235 (74.04%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPNVNESKELQRATKIMKVVSYGWIPLV 705
I VIGAGLGRTGT SL AAL++LGY+TYHF PEH+A WAAYA G S D + + GY+ATCDQP ADL+A QL +P A+V+LTVRDSP++WA SWK L FI VQER FS P F QWIPFM++WK MR +MG LGLPPG+LIRG+ ++PEGWLE QY AHNA V VP ++LLVFNVK+G PLC +L K P+ PFP +NE+ +++ AT M ++SY WIPLV
Sbjct: 19 IRVIGAGLGRTGTMSLKAALEMLGYRTYHFVRPEHAALWAAYADGKTSSDDVLGLIADSGYSATCDQPTADLYAEQLRKFPGAKVVLTVRDSPEQWAASWKTLARFIDVQERSFSLSYPTFIQWIPFMRHWKTMRSLMGT-HLGLPPGELIRGWKAKPEGWLETQYEAHNAQVCATVPSEQLLVFNVKEGGAPLCPFLEKCFPE-EPFPCINEASDIEFATNAMIMISYAWIPLV 251
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S1LK55_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LK55_ALECA) HSP 1 Score: 222 bits (565), Expect = 4.830e-70 Identity = 104/175 (59.43%), Postives = 127/175 (72.57%), Query Frame = 1
Query: 190 TCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPE--GWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPNVNESKELQRATKIMKVVSYGWIPLVA 708
TCD P DL+ Q + YP A+V+LTVRD +WA+SW+ L+ FI VQERPFS+ P F QWIPFM++WK MR +MG GLPPG LIRG+ S P+ WL QY AHNA V+ VP +LLVFNVK+GW PLC +LGKEVPD PFPNVNE+ EL+RA IM V+SY W+P +A
Sbjct: 1 TCDNPACDLYEEQSKRYPAAKVVLTVRDDGARWARSWQTLMGFIEVQERPFSWRYPTFIQWIPFMRHWKTMRSLMGT-HFGLPPGDLIRGWRSRPDPAAWLAQQYEAHNAKVRATVPASRLLVFNVKEGWAPLCEFLGKEVPD-QPFPNVNEASELERARTIMIVLSYAWVPTLA 173
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A448Z0G0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0G0_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.480e-66 Identity = 109/237 (45.99%), Postives = 139/237 (58.65%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGA-PFPNVNESKELQRATKIMKVVSYGWIPLVA 708
I VI AGLGRTGT SL+ AL LGY+ YHF H+ WA A GT + V DGY+A + P D+F + +P+ARVILTVRDS + + +SWK+L++ + V E+PFS+ P F WIP + + +RR MG LGL G L G+ P GWL +QY HN V VP ++LLVF DGWEPLC +LG VP GA PF N + L+R YGWIP+ A
Sbjct: 17 IRVICAGLGRTGTLSLSEALSTLGYRPYHFIDFSHAEEWAGLAEGTSDAGSLLDRIVADGYDAVLENPSCDVFDDLRKRFPDARVILTVRDSAEAFEESWKVLMDTMVVTEQPFSWAFPSFFGWIPLFRRLRVIRRFMGTTHLGLEEGALAHGWRDRPSGWLAEQYDRHNQHVVDSVPPEQLLVFRAGDGWEPLCSFLGTGVPGGAFPFCTTNNKEALRRLRTTFLAAVYGWIPVTA 253
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S3ZE42_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZE42_9EUKA) HSP 1 Score: 154 bits (390), Expect = 3.750e-44 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKL 450
+EVI AG GRTGT SL AAL++LGY+ YHF P H+ WA G V + + DG+NAT + P AD++ L+ P A+V+LTVRD+P+KW +SWK+L E + V ERPFS P F+QWIP KN K +R MGV LGL PG+L
Sbjct: 6 VEVIVAGFGRTGTYSLKAALEILGYRPYHFVHPNHAKEWAXXXEGRRDVDEVLELVENDGFNATLENPTADVYLNVLKRNPGAKVVLTVRDTPEKWEESWKVLFETMEVTERPFSLWFPSFYQWIPLFKNLKIIRTRMGV-HLGLEPGEL 154
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S4VAU4_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VAU4_9DINO) HSP 1 Score: 142 bits (359), Expect = 2.850e-39 Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 265 VRDSPQKWAQSWKMLLEFISVQERPFSFMVPHFHQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEG--WLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPNVNESKELQRATKIMKVVSYGWIPLV 705
VRD P KWA SW++L + + + E+PFS P F QW+PF + K +R MG LGL P +L G+ S+P+ WLEDQY++H A V++ VP +LLVFNV +GW PLC + G+E+P PFP N + ++ +I VV Y WIP++
Sbjct: 1 VRDDPAKWATSWRVLFDTMLLTEQPFSLTFPFFLQWVPFFAHAKVVRLRMGS-HLGLEPYELTHGWRSKPDPGVWLEDQYASHVAQVRRTVPPQQLLVFNVNEGWRPLCEFRGQEIPS-VPFPRSNGAASMKTLRRIFLVVVYCWIPIL 147
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Match: A0A7S1ADH1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADH1_NOCSC) HSP 1 Score: 137 bits (344), Expect = 1.490e-35 Identity = 93/246 (37.80%), Postives = 127/246 (51.63%), Query Frame = 1
Query: 1 IEVIGAGLGRTGTKSLAAALDLLGYKTYHFP-----LPEHSAAWAAYAGGT-GSVQDAISAAVEDGYNATCDQPMADLFAAQLEMYPNARVILTVRDSPQKWAQSWKMLLEFISVQER-----PFSFMVPHF---HQWIPFMKNWKQMRRIMGVPTLGLPPGKLIRGYASEPEGWLEDQYSAHNAAVQKHVPKDKLLVFNVKDGWEPLCRYLGKEVPDGAPFPN-VNESKELQRATKIMKVVSYGW 693
I+VIGAG GRTGT S+ AL+ LGYKTYH P H W A G G+VQ + E+GYNAT D P L+ Q+E YPNA+VILT+R S WA+S+ ++ I+ R PF+ ++P H+W+ F + + +PTL A+ + W D V HVP D+LLVF+V+DGWEPLC +L G FP VN+ + + R T + + W
Sbjct: 42 IQVIGAGFGRTGTASMMLALERLGYKTYHMVKVFAGTPRHPRVWGDVADGVPGAVQVTLDLLAEEGYNATLDYPSCALYKEQMERYPNAKVILTLRKSGFDWARSF---VDTIAKNTRLFAKAPFTALLPGLGKAHRWM-FERCGMALDPDTLMPTLETA--------ATAYDTWAAD--------VMAHVPADRLLVFSVEDGWEPLCSFLDVADCPGESFPRAVNDKQFMIRVTMFLDFTTRFW 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1224.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1224.1.1 >prot_H-akashiwo_Contig1224.1.1 ID=prot_H-akashiwo_Contig1224.1.1|Name=mRNA_H-akashiwo_Contig1224.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=237bp IEVIGAGLGRTGTKSLAAALDLLGYKTYHFPLPEHSAAWAAYAGGTGSVQback to top mRNA from alignment at H-akashiwo_Contig1224:44429..45139+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1224.1.1 ID=mRNA_H-akashiwo_Contig1224.1.1|Name=mRNA_H-akashiwo_Contig1224.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=711bp|location=Sequence derived from alignment at H-akashiwo_Contig1224:44429..45139+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1224:44429..45139+ >mRNA_H-akashiwo_Contig1224.1.1 ID=mRNA_H-akashiwo_Contig1224.1.1|Name=mRNA_H-akashiwo_Contig1224.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=711bp|location=Sequence derived from alignment at H-akashiwo_Contig1224:44429..45139+ (Heterosigma akashiwo CCMP452)back to top |