mRNA_H-akashiwo_Contig1222.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A6V1VU91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VU91_HETAK) HSP 1 Score: 434 bits (1115), Expect = 5.190e-153 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 2
Query: 2 RKRPLHLVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTRDVRDILPKFNGAATPKKIQ 604
RKRPLHLVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTRDVRDILPKFNGAATPKKIQ
Sbjct: 39 RKRPLHLVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTRDVRDILPKFNGAATPKKIQ 239
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A7S2V7A2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7A2_9STRA) HSP 1 Score: 216 bits (550), Expect = 8.660e-68 Identity = 105/187 (56.15%), Postives = 138/187 (73.80%), Query Frame = 2
Query: 20 LVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTRDVRDILPKFNG 580
+VWDLD T+I+SHL+ + + AA + +FAHIDDDF F D PNT TWFRP+A+ V+ VL+ FTVQHVFTAAQ++YT+NI+E+LDP++KLFK +LHRN F E + S+ GKDVL +V+++ +L RTILFDDR+RNFK RP NG LV Y ++D D EML+ + CHF +DVR IL F G
Sbjct: 1 IVWDLDGTLIASHLLPGCEEKYPAAKYPKFFAHIDDDFHFTDGTPNTRTWFRPYAKIVIRVLNIFTVQHVFTAAQQTYTDNIMEKLDPQKKLFKTILHRNCFEEKYISKN--GKDVLFVVKDEDILKRTILFDDRQRNFKQRPENGYLVPEYTEVDSNDLEMLQFFKVILRCHFAKDVRHILCSFVG 185
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A7S4JHH9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JHH9_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.280e-28 Identity = 77/198 (38.89%), Postives = 109/198 (55.05%), Query Frame = 2
Query: 11 PLHLVWDLDATIISSHLIKEEKTRSMAAN--HSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTV-QHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRP-LNGLLVRPYKDI----DPWD-WEMLRLLCACIWCHFTRDVRDILPKFN 577
P H+ WDLD TI+ S + + +N S YF IDDDFPF++ PNT T++RP AR L + F QHV+TAAQ +YT NIL LDP +F V HR+ P+ + GKD+ ++ E L R++LFDDR NF+ + NG+LV Y+D+ D + EM +L+ +D RD+ F+
Sbjct: 36 PPHIYWDLDNTILCSITPRPPDDHPILSNISPSRYFDQIDDDFPFEEGTPNTRTYWRPGARASLKLCGFLGARQHVYTAAQGTYTANILLELDPDGTIFDSVTHRDVIPQPN------GKDLAVVTES---LDRSLLFDDRASNFRPQGGENGVLVPKYEDVAGSSDAGEVLEMAKLVGVVAMALLAKDARDVAQLFS 224
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A7S3PS93_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PS93_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.410e-25 Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 2
Query: 182 ARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTR--DVRDILPKF 574
AR L +L FF QHVFTAAQ+SYT NILE+LDP LF V HR+ P ++ +GKD+ + V + L RTILFDDR RNF +P NG+ V+PY +I+ D EM+RLL ++ R D+R +L +F
Sbjct: 2 ARITLNILRFFVNQHVFTAAQESYTLNILEQLDPDNSLFLTVTHRD-LPS---YKRNVGKDLSVAVPAEKL-HRTILFDDRPRNFDPQPTNGVHVKPYDEINARDMEMIRLL-TIVFLALLRPGDIRPLLCRF 128
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: K0S759_THAOC (FCP1 homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S759_THAOC) HSP 1 Score: 105 bits (261), Expect = 6.500e-24 Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 2
Query: 11 PLHLVWDLDATI---ISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPL-NGLLVRPY 475
PL + +DLD TI IS I + + +F IDDDFPF+ PNT T+ RP + ++ S HV+TAAQKSYT+NIL+ +DP+R LF VLHR+ P+ R GKD+L + L R++LFDD+ NF + NG+L+RP+
Sbjct: 30 PLDIFFDLDHTILCSISPLPISDNGVDNGVGRTLRWFDQIDDDFPFEGNSPNTRTFLRPLSTATIYFCSVIGRVHVYTAAQKSYTDNILKVIDPRRTLFGQVLHRDDHPDI----VRNGKDLLFAGGGEVGLRRSVLFDDKFSNFVPQQYRNGVLIRPF 184
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A1R2BBL2_9CILI (FCP1 homology domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BBL2_9CILI) HSP 1 Score: 61.2 bits (147), Expect = 1.090e-7 Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 2
Query: 20 LVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLW-VLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPE--GHFSRQ--RLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTRDVRDILPK-FNGAATPKKIQ 604
LV DLD T++ S L E + SG + Y +RP L+ VL+FF + ++TA+ K Y ++ +LDP+RK+ K L+R + GHF + RLG+D L+ I+ D+ +F H NG+ + + D DP D E+ ++ T+DVR IL FN PK I+
Sbjct: 43 LVLDLDETLVHSSLQPIENPDDIVTLTSG------------NNIRTLYVKYRPGLMEFLYKVLNFFELV-IYTASTKEYAEQVINKLDPQRKILKYRLYREDCLQIGGHFIKDLSRLGRD----------LSHVIILDNSIASFAHHLDNGIPILSWFD-DPNDGELWKVGNLLEQLVRTQDVRPILNSLFN---LPKMIE 216
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A8C4PXZ9_EPTBU (Ceramide synthase 1 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PXZ9_EPTBU) HSP 1 Score: 61.6 bits (148), Expect = 2.410e-7 Identity = 55/214 (25.70%), Postives = 101/214 (47.20%), Query Frame = 2
Query: 2 RKRPLH-LVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHF--PEGHFSRQR--LGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCA---------CIWCHFTRDVRDILPKFNGAATPKKI 601
R+ P++ LV DLD T++ L+ + A + PF D Y RPH++ L +S +FTA+ K+Y N +L LDP++KL + L+R H +G++ ++ LG+D L++T++ D+ +F ++ NG+ V + +D D ++L ++ +W D+LP+ +GA P+ +
Sbjct: 93 RRTPIYSLVLDLDETLVHCSLMPLQD------------ASFSFEVPFHDVTYKVYVRLRPHSKDFLEKMSVIYEIIMFTASTKAYANKLLNILDPRKKLVRHRLYREHCLCVQGNYVKELSVLGRD----------LSKTVIVDNSPHSFAYQLSNGIPVESWF-VDQEDKQLLDIMSFLEHLVKMPFAVWL-------DLLPR-DGAKFPESV 275
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A1R2CP47_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CP47_9CILI) HSP 1 Score: 59.7 bits (143), Expect = 3.730e-7 Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 2
Query: 200 VLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPE--GHFSRQ--RLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWD---WEMLRLLCACIWCHFTRDVRDILPK-FNGAATPKKIQ 604
VL FF V V+TA+ K Y ++ +LDP+RK+ K L+R+ + GHF + RLG+D L++ I+ D+ +F H NG+ + + D DP D W++ LL I T+DVR IL FN PK +Q
Sbjct: 92 VLKFFEVV-VYTASAKEYAEQVINKLDPQRKMLKYRLYRDDCMQIGGHFVKDLSRLGRD----------LSQVIILDNSITSFAHHLDNGIPILSWFD-DPNDSELWKVTNLLEQLI---NTQDVRPILNSIFN---LPKIVQ 216
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A1R2CCD5_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CCD5_9CILI) HSP 1 Score: 59.7 bits (143), Expect = 3.810e-7 Identity = 64/207 (30.92%), Postives = 98/207 (47.34%), Query Frame = 2
Query: 20 LVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYPNTYTWF---RPHA-RWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNHFPE--GHFSRQ--RLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWD---WEMLRLLCACIWCHFTRDVRDILPK-FNGAATPKKIQ 604
LV DLD T++ S E ++ +G NT T+F RP ++ VL F + ++TA+ K Y ++ +LDP+RK+ K L+R+ + GHF + RLG+D L++ ++ D+ +F H NG+L+ + D DP D W++ LL I T+DVR IL FN PK IQ
Sbjct: 43 LVLDLDETLVHSSQQPIENPDNIVTLSNG---------------TNTRTFFVKYRPGLMEFLRKVLKVFELV-IYTASTKEYAEQVINKLDPQRKILKYRLYRDDCIQIGGHFVKDLSRLGRD----------LSQVVILDNSITSFAHHLDNGILILSWFD-DPSDNELWKVANLLEQLI---NTQDVRPILNSIFN---LPKIIQ 216
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Match: A0A3S3MVN5_9MAGN (CTD small phosphatase-like protein 2 isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MVN5_9MAGN) HSP 1 Score: 60.5 bits (145), Expect = 5.810e-7 Identity = 61/196 (31.12%), Postives = 89/196 (45.41%), Query Frame = 2
Query: 11 PLHLVWDLDATIISSHLIKEEKTRSMAANHSGYFAHIDDDFPFDDCYP----NTYTWFRPHARWVLWVLSFFTVQHVFTAAQKSYTNNILERLDPKRKLFKIVLHRNH--FPEGHFSRQRLGKDVLLIVEEQPLLARTILFDDRERNFKHRPLNGLLVRPYKDIDPWDWEMLRLLCACIWCHFTRDVRDILP-KFN 577
P LV DLD T++ S L H +D DF F + Y RPH R + +S VFTA+Q Y +L LDPKRK+F+ ++R F EG++ KD+ ++ + LAR I+ D+ + F + NG+ + + D DP D +L LL DVR I+ +FN
Sbjct: 314 PTTLVLDLDETLVHSTL-----------EHC-----VDADFTFPVNFNFKEHTVYVRCRPHLRDFMERVSHLFEIIVFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVFVEGNYL-----KDLSILGRD---LARVIIVDNSPQAFGFQVDNGIPIESWFD-DPTDQALLSLLPFLESLVQVEDVRPIIAERFN 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1222.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1222.10.1 >prot_H-akashiwo_Contig1222.10.1 ID=prot_H-akashiwo_Contig1222.10.1|Name=mRNA_H-akashiwo_Contig1222.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=174bp MAANHSGYFAHIDDDFPFDDCYPNTYTWFRPHARWVLWVLSFFTVQHVFTback to top mRNA from alignment at H-akashiwo_Contig1222:323612..324339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1222.10.1 ID=mRNA_H-akashiwo_Contig1222.10.1|Name=mRNA_H-akashiwo_Contig1222.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=728bp|location=Sequence derived from alignment at H-akashiwo_Contig1222:323612..324339+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1222:323612..324339+ >mRNA_H-akashiwo_Contig1222.10.1 ID=mRNA_H-akashiwo_Contig1222.10.1|Name=mRNA_H-akashiwo_Contig1222.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=522bp|location=Sequence derived from alignment at H-akashiwo_Contig1222:323612..324339+ (Heterosigma akashiwo CCMP452)back to top |