mRNA_H-akashiwo_Contig1219.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A7S3UWJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWJ0_HETAK) HSP 1 Score: 213 bits (542), Expect = 2.640e-68 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
Query: 1 FGDVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQT 312
FGDVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQT
Sbjct: 71 FGDVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQT 174
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853F1T4_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853F1T4_9GAMM) HSP 1 Score: 134 bits (337), Expect = 1.270e-33 Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD VVG +DGTL Y++N G+ +SP++E T G +PF+GIDVG YS P D D DGDLDLVVG GTL +++NT S+ +YE +TG +NP+NGI S+P + DIDGDG DL++ + + G + Y N+
Sbjct: 422 DIDGDGDLDLVVGENDGTLKYYQNTGTTSSPAYEAKTGGNNPFNGIDVGGYSTPNLADIDGDGDLDLVVGKDDGTLKYYQNTGT--------TSNPTYEAKTGDSNPFNGIDVVNYSSPILVDIDGDGDLDLVVGE-NDGTLKYYQNT 560
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853F206_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853F206_9GAMM) HSP 1 Score: 134 bits (336), Expect = 1.830e-33 Identity = 70/147 (47.62%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYIN 447
D+D DGDLD VVG S+GTL Y++N G+ ++P++E T G++PF+ IDVG YS P D D DGDLDLVVG +GTL +++NT S+ +YE +TG +NP++GI G SAP + DIDGDG DL++ + + G + Y N
Sbjct: 714 DIDGDGDLDLVVGESNGTLKYYQNTGTTSNPAYEAKTGGSNPFNSIDVGNYSKPTLADIDGDGDLDLVVGEQNGTLKYYQNTGT--------TSNPAYEAKTGGDNPFDGIDVGGYSAPTLADIDGDGDLDLVIGE-TDGTLKYYYN 851
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853EYX0_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853EYX0_9GAMM) HSP 1 Score: 132 bits (333), Expect = 4.940e-33 Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD VVG +GTL Y++N G+ +SP++E T G +PF+GIDVG YS P D D DGDLDLVVG +GTL +++NT++ S+ +YE +TG +NP+NGI +S+P + DIDGDG DL++ + + G + Y N+
Sbjct: 2416 DIDGDGDLDLVVGERNGTLKYYQNTGTTSSPAYEAKTGGNNPFNGIDVGGYSSPTLADIDGDGDLDLVVGENNGTLKYYQNTSS--------TSNPAYEAKTGDSNPFNGIDVGYSSSPTLADIDGDGDLDLVVGE-NYGTLKYYQNT 2554
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853EZS9_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853EZS9_9GAMM) HSP 1 Score: 129 bits (324), Expect = 5.910e-33 Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD V+G + GTL Y++N G+ +SP++E T G +PF+GIDVG YS P D D DGDLDLVVG +GTL +++NT S+ +YE +TG +NP+NGI S P + DIDGDG DL++ + +G + Y N+
Sbjct: 3 DIDGDGDLDLVMGEAYGTLKYYQNTGTTSSPAYEAKTGGNNPFNGIDVGGYSTPTLADIDGDGDLDLVVGEQNGTLKYYQNTGT--------TSNPAYEAETGDSNPFNGIDVGRYSKPTLADIDGDGDLDLVVGE-RNGTLKYYQNT 141
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853F890_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853F890_9GAMM) HSP 1 Score: 130 bits (326), Expect = 6.470e-33 Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD +VG DGTL Y++N GS +SP++E T G +PF+GIDVG YS P D D DGDLDLVVG GTL +++NT S+ +YE +TG +NP+NGI +S+P + DIDGDG DL++ + +G + Y N+
Sbjct: 21 DIDGDGDLD-LVGKDDGTLKYYQNTGSTSSPAYEAKTGGNNPFNGIDVGIYSAPTLADIDSDGDLDLVVGENDGTLKYYQNTGT--------TSNPAYEAKTGDDNPFNGINAGYSSSPILVDIDGDGDLDLVVGE-RNGTLKYYQNT 158
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853EY84_9GAMM (VCBS repeat-containing protein n=2 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853EY84_9GAMM) HSP 1 Score: 132 bits (331), Expect = 9.100e-33 Identity = 69/148 (46.62%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD VVG S+GTL Y++N G+ ++P++E T ++PF+GIDVG + P D D DGDLDLVVG +GTL +++NT+ S+ +YE +TG +NP+NGI G S P + DIDGDG DL++ + S+G + Y N+
Sbjct: 886 DIDGDGDLDLVVGESNGTLKYYQNTGTTSNPAYEAKTGDSNPFNGIDVGNAATPTLADIDSDGDLDLVVGENNGTLKYYQNTST--------TSNPTYEAKTGDSNPFNGIDVGGYSTPNLADIDGDGDLDLVMGE-SNGTLKYYQNT 1024
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853EY73_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853EY73_9GAMM) HSP 1 Score: 130 bits (328), Expect = 1.220e-32 Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD VVG +GTL Y++N G+ +SP++E T G +PF+GIDVG YS P D D DGDLDLVVG GTL +++NT S+ +YE + G +NP+NGI +S P + DIDGDG DL++ + S G + Y N+
Sbjct: 285 DIDGDGDLDLVVGEQNGTLKYYQNTGTTSSPAYEVKTGGNNPFNGIDVGGYSTPNLADIDGDGDLDLVVGKDDGTLKYYQNTGT--------TSNPTYEAKIGDSNPFNGIDVGYHSTPTLADIDGDGDLDLVVGE-SDGTLKYYQNT 423
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: F0YR92_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR92_AURAN) HSP 1 Score: 124 bits (311), Expect = 2.060e-32 Identity = 71/141 (50.35%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 FGDVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGK-----YSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLIL 408
F D+D DGDLD VVG DGTLSY++N GS SPS+E +T +PFDGIDVG +S+PA D D DGDLDLVVG G LF+++N G A S Y TG+ +P++ + NSAPA+GD+DGDG DL++
Sbjct: 8 FADLDGDGDLDLVVGYDDGTLSYYENVGSAASPSYEAVTGSANPFDGIDVGDDNVDYHSMPALADLDGDGDLDLVVGEYWGALFYYENV-------GSAASPT-YSAVTGNASPFDDVDVGRNSAPALGDLDGDGDLDLVV 140
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Match: A0A853F6W2_9GAMM (VCBS repeat-containing protein n=1 Tax=Candidatus Thiodubiliella endoseptemdiera TaxID=2738886 RepID=A0A853F6W2_9GAMM) HSP 1 Score: 127 bits (319), Expect = 2.490e-32 Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 7 DVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVGKYSVPAFIDYDDDGDLDLVVGCGSGTLFFFKNTAARRLGEGRALSDISYEEQTGSNNPYNGITTTGNSAPAVGDIDGDGQDDLILADGSSGEVSLYINS 450
D+D DGDLD VVG +GTL Y++N G+ ++P++E T ++PF+GID G S P D D DGDLDLVVG G+GTL +++NT S+ +YE +TG +NP+NGI S P + DIDGDG DL++ + +G + Y N+
Sbjct: 87 DIDGDGDLDLVVGEENGTLKYYQNTGTTSNPTYEAKTGDSNPFNGIDAGSASSPTLADIDGDGDLDLVVGEGNGTLKYYQNTGT--------TSNPAYEVKTGDSNPFNGIDVRNYSTPTLADIDGDGDLDLVVGE-QNGTLKYYQNT 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1219.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1219.6.1 >prot_H-akashiwo_Contig1219.6.1 ID=prot_H-akashiwo_Contig1219.6.1|Name=mRNA_H-akashiwo_Contig1219.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=150bp FGDVDDDGDLDWVVGGSDGTLSYFKNEGSKTSPSFEEITDGTSPFDGIDVback to top mRNA from alignment at H-akashiwo_Contig1219:225006..225455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1219.6.1 ID=mRNA_H-akashiwo_Contig1219.6.1|Name=mRNA_H-akashiwo_Contig1219.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=450bp|location=Sequence derived from alignment at H-akashiwo_Contig1219:225006..225455+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1219:225006..225455+ >mRNA_H-akashiwo_Contig1219.6.1 ID=mRNA_H-akashiwo_Contig1219.6.1|Name=mRNA_H-akashiwo_Contig1219.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=450bp|location=Sequence derived from alignment at H-akashiwo_Contig1219:225006..225455+ (Heterosigma akashiwo CCMP452)back to top |