mRNA_H-akashiwo_Contig1216.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A1Y1HZL1_KLENI (Hemerythrin domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZL1_KLENI) HSP 1 Score: 161 bits (408), Expect = 3.760e-45 Identity = 97/250 (38.80%), Postives = 142/250 (56.80%), Query Frame = 1
Query: 28 PSSSVIRRVSKWQDEVMLIPHEAFRMYMGWME--VAVTSFHPTLTGHAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDMESVFVDA-----EGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEK-LRSEMPAPIRFLNGRFWDRAWRKKSLGAIRSIIADEDPE 753
P+S VI V+ W D +L PHE R + ME + V F T AWK FF+WYNDWFYP + HHD EE +FFPA++ C P+ + +ADHEELIR +++IR ME F E ++ +EL+Q+V + EH A EE+ ++ E T K L+ QII+ GLSGNA + P ++++++ WAG + VEK R+ +PAPI+FL FW + KK++ + + + DP+
Sbjct: 13 PTSIVIPVVTHWSDASLLTPHEPIRNDLARMERLLQVPFFDGT---QAWKVKAFFKWYNDWFYPNVHHHHDIEETIFFPAVKARCDVIPE-RMAADHEELIRMLDEIRAMELRFKPLKRGAPEPSLSERRLVAEELRQKVAHLATELREHIAEEERFFTPVIKEKFT-KEEHHQLVDQIIKAAGLSGNAKMGPWVVHSMYKWAGKDYVEKEFRAGIPAPIKFLFDHFWYPKYLKKAVRGLDVLELEADPK 257
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A813GJC9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GJC9_POLGL) HSP 1 Score: 127 bits (320), Expect = 1.770e-31 Identity = 82/241 (34.02%), Postives = 131/241 (54.36%), Query Frame = 1
Query: 31 SSSVIRRVSKWQDEVMLIPHEAFRMYMGWMEVAVTSFHPTLTGHAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDMESV-FVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSEM-PAPIRFLNGRFWDRAWRKKSLGAIRSIIADED 747
+S V+ R WQ+E +L+PHE R MG + AV AWK WY D+FY + HH+ EE+++FP L+ G P AK +ADH EL+R M+++RDM + + G+ ++ A V+E +V F + M++H A EE+++ ++L E G A+++QI+ L LP +L+ WAG+E E +E+ P PIR L FW ++++ LG + S+ + D
Sbjct: 92 TSRVLPRPIGWQEEGILLPHEGIRFMMGELSEAVRVMDAKA---AWKWENLATWYQDYFYDVVHHHHEGEEQIYFPWLQ-TRGTIP-AKIAADHPELMRAMDELRDMLATGALKPAGERAELLAKVRE---RVAAFVEDMHQHLAEEEELIPKLLREGGFTHEEEGAIVEQIMASLSLDTLKKTLPVVLHGFKLWAGEERAEAFVAELLPLPIRLLYQNFWSVDFQQRHLGLVASLPEEVD 324
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A813FLF0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FLF0_POLGL) HSP 1 Score: 129 bits (325), Expect = 5.260e-31 Identity = 85/241 (35.27%), Postives = 132/241 (54.77%), Query Frame = 1
Query: 31 SSSVIRRVSKWQDEVMLIPHEAFRMYMGWMEVAVTSFHPTLTGHAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDM-ESVFVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSE-MPAPIRFLNGRFWDRAWRKKSLGAIRSIIADED 747
+S V+ R WQ+E +L+PHE R MG + AV AWK WY D+FY + +EE ++FP L+ G P AK SADH EL+R M+++RDM S + G+ ++ A +L+++V F + M++H A EE+++ ++L E G + A + QII+ GL GN LP +L+ WAG+E E +E +P PIR L FW ++++ LG + S+ + D
Sbjct: 285 TSRVLPRPVGWQEEGILLPHEGIRFLMGELSEAVRVMDAKA---AWKWENLATWYQDYFYDVVHXXXXSEELIYFPWLQ-TKGTIP-AKISADHPELMRAMDELRDMLASGALKPAGERAELLA---KLRERVAAFVEDMHQHLAEEEEVIPKLLREGGFTQEEEGACVGQIIESLGLDGNKKSLPVMLHGFKLWAGEERAEAFVAEHLPPPIRLLYQNFWSADFQQRHLGLVASLPEEVD 517
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A813KYT6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KYT6_POLGL) HSP 1 Score: 128 bits (321), Expect = 5.990e-30 Identity = 80/240 (33.33%), Postives = 129/240 (53.75%), Query Frame = 1
Query: 31 SSSVIRRVSKWQDEVMLIPHEAFRMYMGWMEVAVTSFHPTLTGHAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDM-ESVFVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSEMPAPIRFLNGRFWDRAWRKKSLGAIRSIIADED 747
+S V+ WQ+E +L+PHE R MG + A AWK WY D+FY + ++EE+++FP L+ G P AK SADH EL+R M+++RDM S + GD ++ A +L+++V F + M++H A EE+++ ++L E G + A + QI+Q + LP +L+ WAG+E E +E+P PIR L FW ++++ LG + S+ + D
Sbjct: 1186 TSRVLPHPVGWQEEGILLPHEGIRFLMGELSEAA----------AWKWENLATWYQDYFYDVVHHXXESEEQIYFPWLQ-TRGAIP-AKISADHPELMRAMDELRDMLASGALKPAGDRAELLA---KLRERVAAFVEDMHQHLAEEEELIPKLLREGGFTQEEEGACVGQIMQSLSMDALKKSLPAMLHGFKLWAGEERAEAFVAELPPPIRLLYQNFWSADFQQRHLGLVASLPEEVD 1410
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A813F961_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F961_POLGL) HSP 1 Score: 123 bits (308), Expect = 8.370e-30 Identity = 84/241 (34.85%), Postives = 130/241 (53.94%), Query Frame = 1
Query: 31 SSSVIRRVSKWQDEVMLIPHEAFRMYMGWMEVAVTSFHPTLTGHAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDM-ESVFVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSE-MPAPIRFLNGRFWDRAWRKKSLGAIRSIIADED 747
+S V+ WQ+E +L+PHE R M + AV T W+ WY D+FY + H+D+EE + FP L+ G P AK ADH EL+R M+++RDM S G+ ++ A +L+++V F + M++H A EE+++ ++L E G + A + QII+ GL GN LP +L+ L WAG+E E +E +P PIR L FW ++ + LG + S+ + D
Sbjct: 83 TSRVLPHPVGWQEEGILLPHEGIRFLMEELSEAVRVMDAKAT-RKWEN--LSTWYQDYFYDVVHHHYDSEELIDFPWLQ-TKGAIP-AKILADHPELMRTMDELRDMLASGSFKPAGERAELLA---KLRERVAAFVEDMHQHLAEEEEVIPKLLGEGGFTQEKEGAAVGQIIESLGLDGNKKSLPVMLHGLKLWAGEERAEAFVAEHLPLPIRLLYRTFWSADFQHRHLGLVASLPEEVD 315
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A813DTW5_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DTW5_POLGL) HSP 1 Score: 119 bits (299), Expect = 1.940e-28 Identity = 83/238 (34.87%), Postives = 125/238 (52.52%), Query Frame = 1
Query: 40 VIRRVSKWQDEVMLIPHEAFRMYMGWMEVAVTSFHPTLTGHAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDM-ESVFVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSE-MPAPIRFLNGRFWDRAWRKKSLGAIRSIIADED 747
V+ R WQ+E +L PHE R MG + AV + AWK WY D+FY + +FFP L+ G P AK SADH EL+R M+++RDM S + G+ ++ A L+++V F + M++H A EE+++ ++L E + + QII+ GL GN LP +L+ L WAG+E E +E +P PIR L FW ++++ LG + S+ A D
Sbjct: 93 VLPRPVGWQEEGILFPHEGLRFLMGELSEAVRVMDAKV---AWKWENLATWYQDYFYDVVHXXXXXXXVIFFPWLQ-TRGAIP-AKISADHPELMRTMDELRDMFASGALKPAGERAELLAR---LRERVAAFVEDMHQHLAEEEEVIPKLLREGNFTQEEEAPVTGQIIESLGLDGNKKSLPVMLHGLKLWAGEERAEAFVAEHLPLPIRLLYQHFWKPDFQERHLGLLASLPAGVD 322
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A7R9WC07_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WC07_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.110e-22 Identity = 66/202 (32.67%), Postives = 104/202 (51.49%), Query Frame = 1
Query: 61 WQDEVMLIPHEAFRMYMGWMEVAVTSFHPTLTG-HAWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDMESVFVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSEMPAPI 663
W D +LIPHEA R M ME +V + +L AWK F +WY ++FY ++ +HHD EEEL+FP + + P+ K + H EL+ M+ I+ + + D + + L++ V DF M H EE++V +L + T + + ++Q+I+Q+GG+ LP IL A+ WA E MP P+
Sbjct: 69 WADIGLLIPHEAIRREMTGMERSVDAMPESLDATSAWKGKYFARWYIEYFYQSVHDHHDNEEELYFPWIA-TKADLPE-KLTQSHVELVEAMDVIKGHCETILKKDDDGYDCASEIAGLKKSVPDFVSNMRAHLKEEEEVVPTLLRTHFTHQEE-EEVVQKILQKGGMDEVRAFLPSILLAMKEWAAPEFYNDFVGSMPPPV 267
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: A0A813FGL6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FGL6_POLGL) HSP 1 Score: 98.6 bits (244), Expect = 1.450e-21 Identity = 66/181 (36.46%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 163 AWKPAVFFQWYNDWFYPALIEHHDTEEELFFPALEEICGEFPKAKSSADHEELIRRMNDIRDME-SVFVDAEGDFTKITAAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEKLRSEM------PAPI-RFLNGR 681
AWK WY D+FY + HHD+EE+++FP L+ G P AK SADH EL+R M+++RDM S + G+ ++ A +L+++V F + +++H A EE+++ ++L E G + A + QII+ GL GN LP +L+ WA +E E +E PAP+ + L+GR
Sbjct: 16 AWKWENLATWYQDYFYDVVHHHHDSEEQIYFPWLQ-TKGAIP-AKISADHPELMRAMDELRDMPASGALKPAGERAELLA---KLRERVAAFVEDIHQHLAEEEELIPKLLKEGGFTQEEEGARVGQIIESLGLDGNKKSLPVMLHGFKLWAVEERAEAFVAEHLPPPPHPAPLPKLLDGR 191
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Match: X6MFD1_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MFD1_RETFI) HSP 1 Score: 75.5 bits (184), Expect = 2.760e-13 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 397 AAVQELQQQVKDFRKLMNEHFAWEEKIVLQMLLENGTPKATVDALIQQIIQRGGLSGNALLLPGILYALHSWAGDEGVEK-LRSEMPAPIRFLNGRFWDRAWR 702
A + EL + +F + + +H + EE+ +L E D ++QQII+ GL GNAL LP +LYA+HSWAG E ++K + +P PI++LN W WR
Sbjct: 25 AFIDELVRNFDEFLRDLEDHLSEEERFTPGLLEEGKFTLQEHDQIVQQIIRDQGLGGNALSLPLMLYAMHSWAGVEDLDKYMMPNIPGPIKYLNKNSWFPKWR 127 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1216.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1216.2.1 >prot_H-akashiwo_Contig1216.2.1 ID=prot_H-akashiwo_Contig1216.2.1|Name=mRNA_H-akashiwo_Contig1216.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=251bp MVGFPPSAPPSSSVIRRVSKWQDEVMLIPHEAFRMYMGWMEVAVTSFHPTback to top mRNA from alignment at H-akashiwo_Contig1216:210181..210933- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1216.2.1 ID=mRNA_H-akashiwo_Contig1216.2.1|Name=mRNA_H-akashiwo_Contig1216.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=753bp|location=Sequence derived from alignment at H-akashiwo_Contig1216:210181..210933- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1216:210181..210933- >mRNA_H-akashiwo_Contig1216.2.1 ID=mRNA_H-akashiwo_Contig1216.2.1|Name=mRNA_H-akashiwo_Contig1216.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=753bp|location=Sequence derived from alignment at H-akashiwo_Contig1216:210181..210933- (Heterosigma akashiwo CCMP452)back to top |