mRNA_H-akashiwo_Contig1214.8.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1214.8.1
Unique NamemRNA_H-akashiwo_Contig1214.8.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A7S3Y8S1_HETAK (Hypothetical protein (Fragment) n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S1_HETAK)

HSP 1 Score: 373 bits (957), Expect = 4.290e-124
Identity = 179/233 (76.82%), Postives = 197/233 (84.55%), Query Frame = 3
Query:  813 GWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHREYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFG 1511
            GWLTVGPS++ GFDL  +MFRDRLN+RHGQ L+GLP+VCDGCG PFSLEHAL C KGG +K GHD + DE  HL ++AYGA   KKEPFLRDASG V DKDLRADF+A  VWERQRVAFFDNRILDADAPSRF+ N SYVTAMR AVQEKK +Y ERCE++AGSFTPLVCTVDGVFHRE+VAFMKRVAAALA KW + Y  VMCWVR+RLQFALIRAVDLRLRGSR  F   G
Sbjct:    3 GWLTVGPSKQYGFDLSREMFRDRLNLRHGQELRGLPSVCDGCGAPFSLEHALNCMKGGNIKLGHDQVRDECVHLCTMAYGAAGVKKEPFLRDASGNVRDKDLRADFLAIGVWERQRVAFFDNRILDADAPSRFDRNTSYVTAMRAAVQEKKTRYLERCEEMAGSFTPLVCTVDGVFHREFVAFMKRVAAALAGKWGKSYEEVMCWVRIRLQFALIRAVDLRLRGSRMRFQKAG 235          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A7S4DD50_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD50_HETAK)

HSP 1 Score: 370 bits (950), Expect = 1.770e-122
Identity = 188/207 (90.82%), Postives = 193/207 (93.24%), Query Frame = 3
Query:  558 ERAKQEFQGLGLEFLSLEGSAVLVAVMKEGTMVAEEDHDDQLRRVRREMKDRWGREEVESTERLVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDN 1178
            E A+  FQ      LS+EGSAVLVA MKEGTMVAEEDHDDQLRRVRREMKDRWGREE ESTERLVAGLPKRARRALERVRKEN  GWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVK+GHDH+VDESCHLASLAYGAGVKK EPFLRDASGKVLDKDLRADFMA+SVWERQRVAFFDN
Sbjct:  124 ETAEDVFQ------LSVEGSAVLVAAMKEGTMVAEEDHDDQLRRVRREMKDRWGREEDESTERLVAGLPKRARRALERVRKENVSGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKK-EPFLRDASGKVLDKDLRADFMAHSVWERQRVAFFDN 323          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A7S4DEE9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEE9_HETAK)

HSP 1 Score: 249 bits (637), Expect = 6.530e-72
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 1
Query:    1 YGNASGRLREAVASLATKMSNEVLEWSDLSALLVRIGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLVAGGLKSGIEGGVHAMRELWEDDDTEVVVLVDASNAFNSLDRQAALWNCRILCS 402
            YGNASGRLREAVASLATKMSNEVLEWSDLSALLVR GIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNL AGGLKSGIEGGVHAMRELW DDDTEVVVLVDASNAFNSLDRQAALWNCRIL S
Sbjct:  328 YGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNL-AGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWS 460          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A7S3Y8R3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8R3_HETAK)

HSP 1 Score: 249 bits (637), Expect = 1.250e-70
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 1
Query:    1 YGNASGRLREAVASLATKMSNEVLEWSDLSALLVRIGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLVAGGLKSGIEGGVHAMRELWEDDDTEVVVLVDASNAFNSLDRQAALWNCRILCS 402
            YGNASGRLREAVASLATKMSNEVLEWSDLSALLVR GIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNL AGGLKSGIEGGVHAMRELW DDDTEVVVLVDASNAFNSLDRQAALWNCRIL S
Sbjct:  328 YGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNL-AGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWS 460          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A146L7G5_LYGHE (Uncharacterized protein n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L7G5_LYGHE)

HSP 1 Score: 251 bits (640), Expect = 6.890e-70
Identity = 169/491 (34.42%), Postives = 222/491 (45.21%), Query Frame = 3
Query:  408 QTWYADDASAGGKMGQVREWLDALLEDGPKYGYYPEPRKSTAIVKDWQQLERAKQEFQGLGLEFL--------------------------------------SLEGSAVLVAVMKE------------------------------------------------------------------GTMVAEED-------------------HDDQLRRVRREMKDRWGREEVESTERLVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHREYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFG 1511
            Q WYADD++  G++  VREWL  L E+GPK+GYYPEP KS  IVK   + ERA + FQ L ++ +                                      S    A   A +K                                                                   GT+   +D                   H+ Q++    E K     ++   +E+++AGL    +R + R+   N   WL+V P      DL    FRD L MR+G    GLP  CDGCGE   L HAL CKKGGLVK GHD++ DE   LA+LA+G GV   EP LRDA+G      L AD  A  VWE  RVAFFDNRI++ADAPS   C   +      A +EK  KY +  ED+  SFTPL+ + +GV H+E+ AF+KRVA  L +KW  P      +V+V++QFA++RAV LRLRG+RK     G
Sbjct:  526 QVWYADDSACAGRLIAVREWLSRLQEEGPKWGYYPEPAKSYLIVKPGLE-ERAAEVFQDLNIQIVQSHRYLGGTIGPLSAQEEFVSGKVAEWVECVEKLAKAASTSPQAAYTAYVKSLQREWGYVQRVIGECQDQYEPLKKTIKETFVPALFGREVSEEVHRLLNLPTKLGGLAIDDPTQTAVGTVQISQDATHHLANCIQTGDPLDSARHEAQVQATLSEAKRIRLEQQKAESEQVIAGLGSERQRIIRRILDGNASQWLSVLPIAADNLDLSCSQFRDALTMRYGYEPSGLPTFCDGCGELMGLTHALNCKKGGLVKWGHDYVRDECAMLANLAWG-GVTT-EPVLRDAAGG--QPALIADIQANGVWESGRVAFFDNRIINADAPSY--CTREWSAVSHQAAREKHRKYDQAAEDVRSSFTPLIASCEGVLHKEFEAFLKRVAGKLTDKWETPLSQTTSFVKVKMQFAVLRAVSLRLRGTRKRLRSLG 1009          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A8D8LEJ6_9HEMI (Hypothetical protein n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8LEJ6_9HEMI)

HSP 1 Score: 244 bits (622), Expect = 5.120e-69
Identity = 162/490 (33.06%), Postives = 230/490 (46.94%), Query Frame = 3
Query:  408 QTWYADDASAGGKMGQVREWLDALLEDGPKYGYYPEPRKSTAIVKDWQQLERAKQEFQGLGLE------------------------------------------------------------------------FLSLE-------------------------------GSAV--------------------LVAVMKEGTMVAEEDHDDQLRRVRREMKDRWGREEVESTERLVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYG-AGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHREYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHG 1505
            Q WYADD+S  GK+ +++ W D L+E+GPK+GYYPEP KS  I+K+  + E A+  F+G  ++                                                                        +LSL+                               G A+                    ++  +K G  +    H  Q++    E   R   +E E ++R+++ LP +A+R + RV + N   WLTV P+    FDL    FRD L MR+G+ +  LP +CDGCG+  ++ HAL CKKGGLVK GHD   D    +A LA+G  G+   EP +R+AS  V    L  DF A SVW+  R AFFDNRI++ADA S  +C  S+        ++K  KY    ED  GSFTPL+C+ +GV H EY  ++KR+A  L+ KW + +G V+ WVRV+ Q ++IRAV LRLRGSR+   G
Sbjct:  231 QNWYADDSSCLGKLRKIKSWFDLLIEEGPKWGYYPEPSKSILIIKEGMERE-AENIFEGTNIKIVHSHPFLGGMIGPDSAKDKYVEEKVKFWVEAVKKFSIAAEKSPQAALAAFTKSLQFEWAFLQRVVDADTEKYLSLKNTIRGYLTPAIMKCEVQDIEHELFALPAKLGGLAIKDPMNMAERSLPTSQKSVEKIIDAIKSGEALDLNAHSYQVKSTVNEEIARREHKEKEESDRIISALPAKAKRCVSRVIQGNASHWLTVIPTSADNFDLSPTQFRDALYMRYGKEIS-LPQMCDGCGDQMNVTHALNCKKGGLVKHGHDQHRDHCAAMAKLAWGRVGI---EPVMREASDGVTA--LYGDFWADSVWDSGRTAFFDNRIVNADAASYESC--SWAAVSNRHARQKHMKYDLAAEDNRGSFTPLICSAEGVMHCEYEVYVKRLAYVLSTKWKKNFGQVLAWVRVQEQMSVIRAVSLRLRGSRRIVRG 711          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A0K8SIS0_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8SIS0_LYGHE)

HSP 1 Score: 231 bits (589), Expect = 2.110e-68
Identity = 130/299 (43.48%), Postives = 178/299 (59.53%), Query Frame = 3
Query:  600 LSLEGSAVLVAVMKEGTMVAEEDHDDQLRRVRREMKDRWGREEVESTERLVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHREYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKA 1496
            LS E +AVL + ++ G      DH D++ + +   + R G E+ E + +++  L    +R L R+R+     WLTV P    G DL    FRD L++R+G     LP  CDGC  PF + HAL CKKGGLVK GHD + D+   LA LA+       EP LR++S    +  L AD   + VW+ +RVAFFD+RI++ADAPS      ++ +  R+A +EK  KY    ED  GSFTPLVC+ DGV H EY  F+KR+A  L+EKW +    V  WVRV+ Q ++IRAV LRLRGSR++
Sbjct:    9 LSKEATAVLSSALQSGGDFRLFDHKDKVGQTQAASRKRLGEEKKEVSRQIIDQLAPNQKRILHRIREGRASQWLTVTPIAADGLDLSPLQFRDALSLRYGHQPADLPGTCDGCEAPFDMTHALNCKKGGLVKHGHDQLRDDCARLAHLAWQQ--VSLEPVLRESSEN--ETALVADIGIHGVWDGERVAFFDHRIINADAPSYRT--QTWESLSRSAAREKHLKYNRAAEDRRGSFTPLVCSCDGVLHIEYETFLKRMANTLSEKWNKSLSWVTSWVRVKTQMSVIRAVSLRLRGSRRS 301          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A0K8SWD2_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8SWD2_LYGHE)

HSP 1 Score: 226 bits (575), Expect = 9.520e-67
Identity = 124/272 (45.59%), Postives = 163/272 (59.93%), Query Frame = 3
Query:  696 REMKDRWGREEVESTERLVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHREYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFG 1511
            +E K R    ++  +   ++ L  + +  ++R+       WLT+ P+    FDL    FRD L++R+G   +GLPA+CDGCG   ++ HAL CKKGGLVK GHD + DE   LASLA+  GV   EP L+DAS       L AD  A  VWE  R A+FD RI++ADAPS       + T    A +EK  KY    EDL GSFTPL+ + DGV HRE+  F KR+AA L EKW +P+  V+ WVRV+LQ A+IRAV LR+RG+RK     G
Sbjct:    8 KEAKKRRAERDLTLSTEAISALSPQQKDTVQRIVDGRASQWLTIIPTAADHFDLSPNQFRDALSLRYGHTPEGLPALCDGCGSIMNVTHALNCKKGGLVKHGHDQVRDECARLASLAW-EGVAT-EPVLQDASANA--PMLVADIKAEGVWESGRAAYFDTRIINADAPSYRG--QEWSTISNNAAREKHNKYNRAAEDLRGSFTPLIISCDGVMHREFGVFSKRIAAVLNEKWSKPFSQVVSWVRVKLQMAVIRAVSLRIRGARKRVRCLG 273          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A7S3XPK9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPK9_HETAK)

HSP 1 Score: 217 bits (552), Expect = 1.090e-65
Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 3
Query:  951 SLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASG-KVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGS 1304
            SLEHALCCKKGG +K+G+D +VDESCHLASLAYGAGVKK EPFLRDASG KVLDKDLRADFMA+SVWERQRVAFFDNRILDADAPSRFN NMSYVTAMRTAVQEKK+KYQERCEDLAGS
Sbjct:    1 SLEHALCCKKGGNMKKGYDQLVDESCHLASLAYGAGVKK-EPFLRDASGGKVLDKDLRADFMAHSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRTAVQEKKKKYQERCEDLAGS 118          
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Match: A0A6H5HCT1_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HCT1_9HEMI)

HSP 1 Score: 238 bits (608), Expect = 2.110e-65
Identity = 136/299 (45.48%), Postives = 182/299 (60.87%), Query Frame = 3
Query:  621 VLVAVMKEGTMVAEEDHDDQLRRVRREMKD-RWGREEVESTERLVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLAYGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDADAPSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHREYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGM 1514
            VLV+ +K GT +   +H  ++ R+ ++ K  R   ++  STE ++  L    +R L+R+  E    WLTV P+   G+DL    FRD L +R+G    GLP  CDGC   F + HAL CKKGGLVK+GHD++ DE+  LA+ A+G GV   EP +R+A     +  L  D     VWE  R AFFDNRI++ADA S  +   S +   + A QEK  KY + CEDL GSFTPLVC+ DGV HRE+   +KR A  LAEKW  PY  V+ WVRVR++ A+I+AV LRLRG+R+     GM
Sbjct:  738 VLVSSIKNGTPLNYSEHWTRVERISKDAKKARADADQQRSTE-IIEQLQPHQQRVLKRIIAEKASHWLTVLPNPTDGYDLSPTQFRDALALRYGHTPMGLPQTCDGCSNQFDVSHALNCKKGGLVKRGHDYVRDETAALAAQAWG-GVTF-EPLIREAGAN--ETALVGDIRIEGVWESGRPAFFDNRIVNADAASYTSREWSQIA--QQAAQEKHHKYDQACEDLRGSFTPLVCSCDGVLHREFHTLLKRTADRLAEKWKRPYTQVLGWVRVRIEIAIIKAVSLRLRGARRKAQYLGM 1029          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1214.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8S1_HETAK4.290e-12476.82Hypothetical protein (Fragment) n=4 Tax=Heterosigm... [more]
A0A7S4DD50_HETAK1.770e-12290.82Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DEE9_HETAK6.530e-7297.01Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8R3_HETAK1.250e-7097.01Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A146L7G5_LYGHE6.890e-7034.42Uncharacterized protein n=2 Tax=Lygus hesperus Tax... [more]
A0A8D8LEJ6_9HEMI5.120e-6933.06Hypothetical protein n=3 Tax=Cacopsylla melanoneur... [more]
A0A0K8SIS0_LYGHE2.110e-6843.48Uncharacterized protein (Fragment) n=1 Tax=Lygus h... [more]
A0A0K8SWD2_LYGHE9.520e-6745.59Uncharacterized protein (Fragment) n=1 Tax=Lygus h... [more]
A0A7S3XPK9_HETAK1.090e-6590.76Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5HCT1_9HEMI2.110e-6545.48Uncharacterized protein n=1 Tax=Nesidiocoris tenui... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1214contigH-akashiwo_Contig1214:332499..334559 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog400682.PAC_15708082
PFAMsRVT_1
Model size1514
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.06e-49
EggNOG OGs2E24P@1|root,2S9D9@2759|Eukaryota,3A6X8@33154|Opisthokonta,3BYHR@33208|Metazoa
Cds size1068
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387123.380553-UTR-H-akashiwo_Contig1214:332498..3328961681387123.380553-UTR-H-akashiwo_Contig1214:332498..332896Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1214 332499..332896 +
1681387123.3912575-UTR-H-akashiwo_Contig1214:333071..3331191681387123.3912575-UTR-H-akashiwo_Contig1214:333071..333119Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1214 333072..333119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387123.3996165-CDS-H-akashiwo_Contig1214:333119..3332721681387123.3996165-CDS-H-akashiwo_Contig1214:333119..333272Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1214 333120..333272 +
1681387123.4079618-CDS-H-akashiwo_Contig1214:333644..3345591681387123.4079618-CDS-H-akashiwo_Contig1214:333644..334559Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1214 333645..334559 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1214.8.1prot_H-akashiwo_Contig1214.8.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1214 333120..334559 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1214.8.1

>prot_H-akashiwo_Contig1214.8.1 ID=prot_H-akashiwo_Contig1214.8.1|Name=mRNA_H-akashiwo_Contig1214.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=356bp
MGQVREWLDALLEDGPKYGYYPEPRKSTAIVKDWQQLERAKQEFQGLGLE
FLSLEGSAVLVAVMKEGTMVAEEDHDDQLRRVRREMKDRWGREEVESTER
LVAGLPKRARRALERVRKENGLGWLTVGPSREMGFDLPAQMFRDRLNMRH
GQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKQGHDHMVDESCHLASLA
YGAGVKKKEPFLRDASGKVLDKDLRADFMAYSVWERQRVAFFDNRILDAD
APSRFNCNMSYVTAMRTAVQEKKEKYQERCEDLAGSFTPLVCTVDGVFHR
EYVAFMKRVAAALAEKWYEPYGVVMCWVRVRLQFALIRAVDLRLRGSRKA
FHGFGM
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mRNA from alignment at H-akashiwo_Contig1214:332499..334559+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1214.8.1 ID=mRNA_H-akashiwo_Contig1214.8.1|Name=mRNA_H-akashiwo_Contig1214.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2061bp|location=Sequence derived from alignment at H-akashiwo_Contig1214:332499..334559+ (Heterosigma akashiwo CCMP452)
TATGGTAATGCTAGTGGGAGGCTGAGGGAGGCGGTTGCGAGCCTGGCCAC GAAGATGTCAAACGAGGTCCTAGAGTGGAGTGATCTGTCGGCGCTGCTGG TTCGTATAGGCATCATGCTGGATAAGAAGCCGGGGCTTAGGCCTATTGGG ATTGGGGAGGTGTTGCAGAGGATCTTGGCCAAGGCGGTGGCGTGGGTCAC TAAGGGGGATGTGACGGAGGTCTGTGGGACTGACAACCTGGTGGCTGGGG GGCTGAAGTCTGGGATTGAgGGGGGTGTTCATGCCATGAGGGAGTTGTGG GAAGACGACGACACCGAGGTGGTTGTGCTGGTGGATGCCTCTAATGCCTT CAACTCTTTGGATCGCCAGGCTGCTCTCTGGAACTGTAGGATTTTGTGGT CTAGGGCTTCATATTTCCTCTTCAACACTTAccggggctacgCGCGCATT TTTGTGAAGGGGGTGGCGCAGCCAGTTCTCAGCAGGAAGGGGATGTCCCA GGGGGACCCGCTGGCGATGCTAATGTATGCAATGGGCGTGCTTCCTCTGG TGCGCAAGCTGAAGGCTGGGAAGTTCTGTGCTCAGACTTGGTACGCCGAT GATGCCTCAGCGGGAGGGAAGATGGGCCAGGTGAGGGAGTGGCTGGACGC CCTGTTGGAGGATGGCCcgAAGTACGGCTACTACCCAGAGCCTAGGAAAA GCACCGCAATTGTGAAGGATTGGCAGCAGCTTGAGCGGGCCAAGCAGGAG TTTCAGGGGCTGGGCTTGGAGTTTGTGGAGGCCTCGAGGTTTCTTGGGGG ATGATTCCTGGGGAAGGAAGAGGTAGTCCGCCAGCTGTTGGAAGAGAAGG TGACGAAGTGGGTGGAGACAGTGGAGGATCTCTCGGAGGCGGCAGTGGTG TACCCTCAAGATGCCTACGTGTGCTTCCTCAAGTCGCTGCAGTGTGAGTG GGGCTAGGTCCAGAGGGTGGTGGAAGGGGCTGCTGCTAAGTTGGAGCCTT TGGACAGGGTCATTCAAGACAAGTTCTTACCTGCAGTGTTTGGGCGTGAG TTGCAGGGCTGGGAGAAGGAGCTTGTCAAGGTGGCGCCGAAGAAGGGTGG CTTAGGTGTCAGGTGCCCTACCGAGACCGCCGAGGACATCTTCCAGCTGT CTTTGGAAGGGAGTGCAGTACTGGTGGCAGTAATGAAGGAGGGCACCATG GTAGCTGAGGAGGATCACGATGACCAGCTGAGGAGGGTGCGGCGGGAGAT GAAGGACCGGTGGGGGAGGGAGGAGGTCGAGAGCACTGAGCGTCTGGTGG CGGGGCTTCCTAAGCGGGCGAGGCGGGCTTTGGAGCGGGTTCGCAAGGAA AATGGCTTGGGGTGGCTCACAGTGGGTCCTTCACGGGAGATGGGTTTTGA TCTTCCGGCTCAGATGTTTCGTGACCGTCTTAACATGCGGCACGGGCAGG GTCTCCAGGGGCTGCCAGCAGTCTGTGATGGGTGTGGAGAGCCTTTTAGC TTGGAGCATGCCCTGTGCTGCAAGAAGGGGGGCCTTGTGAAGCAAGGGCA TGACCATATGGTGGATGAGAGTTGCCACCTGGCGAGCTTGGCTTATGGGG CTGGGGTGAAGAAGAAGGAGCCTTTCCTGAGGGATGCCAGTGGGAAGGTG CTAGACAAGGACCTTCGGGCGGACTTCATGGCTTATAGTGTGTGGGAGAG GCAGAGGGTGGCGTTTTTTGACAACCGTATTTTAGATGCTGACGCACCTT CTCGTTTCAACTGCAATATGAGCTATGTGACTGCTATGCGCACCGCAGTA CAGGAGAAGAAGGAGAAATACCAGGAGCGCTGCGAGGACCTGGCTGGTAG CTTCACACCTTTAGTGTGCACGGTGGATGGGGTCTTTCACAGGGAGTATG TCGCTTTCATGAAGAGGGTGGCGGCTGCGCTTGCGGAGAAATGGTATGAG CCCTATGGGGTGGTGATGTGCTGGGTAAGGGTACGGCTGCAGTTTGCACT GATCCGGGCTGTGGACCTGAGACTGCGTGGGTCGAGGAAGGCGTTTCATG GTTTCGGCATG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1214:332499..334559+

>mRNA_H-akashiwo_Contig1214.8.1 ID=mRNA_H-akashiwo_Contig1214.8.1|Name=mRNA_H-akashiwo_Contig1214.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1068bp|location=Sequence derived from alignment at H-akashiwo_Contig1214:332499..334559+ (Heterosigma akashiwo CCMP452)
ATGGGCCAGGTGAGGGAGTGGCTGGACGCCCTGTTGGAGGATGGCCcgAA
GTACGGCTACTACCCAGAGCCTAGGAAAAGCACCGCAATTGTGAAGGATT
GGCAGCAGCTTGAGCGGGCCAAGCAGGAGTTTCAGGGGCTGGGCTTGGAG
TTTCTGTCTTTGGAAGGGAGTGCAGTACTGGTGGCAGTAATGAAGGAGGG
CACCATGGTAGCTGAGGAGGATCACGATGACCAGCTGAGGAGGGTGCGGC
GGGAGATGAAGGACCGGTGGGGGAGGGAGGAGGTCGAGAGCACTGAGCGT
CTGGTGGCGGGGCTTCCTAAGCGGGCGAGGCGGGCTTTGGAGCGGGTTCG
CAAGGAAAATGGCTTGGGGTGGCTCACAGTGGGTCCTTCACGGGAGATGG
GTTTTGATCTTCCGGCTCAGATGTTTCGTGACCGTCTTAACATGCGGCAC
GGGCAGGGTCTCCAGGGGCTGCCAGCAGTCTGTGATGGGTGTGGAGAGCC
TTTTAGCTTGGAGCATGCCCTGTGCTGCAAGAAGGGGGGCCTTGTGAAGC
AAGGGCATGACCATATGGTGGATGAGAGTTGCCACCTGGCGAGCTTGGCT
TATGGGGCTGGGGTGAAGAAGAAGGAGCCTTTCCTGAGGGATGCCAGTGG
GAAGGTGCTAGACAAGGACCTTCGGGCGGACTTCATGGCTTATAGTGTGT
GGGAGAGGCAGAGGGTGGCGTTTTTTGACAACCGTATTTTAGATGCTGAC
GCACCTTCTCGTTTCAACTGCAATATGAGCTATGTGACTGCTATGCGCAC
CGCAGTACAGGAGAAGAAGGAGAAATACCAGGAGCGCTGCGAGGACCTGG
CTGGTAGCTTCACACCTTTAGTGTGCACGGTGGATGGGGTCTTTCACAGG
GAGTATGTCGCTTTCATGAAGAGGGTGGCGGCTGCGCTTGCGGAGAAATG
GTATGAGCCCTATGGGGTGGTGATGTGCTGGGTAAGGGTACGGCTGCAGT
TTGCACTGATCCGGGCTGTGGACCTGAGACTGCGTGGGTCGAGGAAGGCG
TTTCATGGTTTCGGCATG
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