mRNA_H-akashiwo_Contig1210.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A6V1V4J2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V4J2_HETAK) HSP 1 Score: 367 bits (943), Expect = 2.950e-123 Identity = 178/189 (94.18%), Postives = 182/189 (96.30%), Query Frame = 1
Query: 1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFV 567
IGKSIS PIAGIYLNWF+EQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLK+E VGEKVVTSVY+K+TH FRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWEL FLKDQFIS NGYP VREVDRVFASYVPGVEV EEEDKPTIFAPFV
Sbjct: 207 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKETHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFIS-NGYP-VREVDRVFASYVPGVEVEEEEDKPTIFAPFV 393
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A7S3Y8W7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8W7_HETAK) HSP 1 Score: 199 bits (505), Expect = 1.040e-60 Identity = 104/133 (78.20%), Postives = 107/133 (80.45%), Query Frame = 1
Query: 562 FVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHG------------LFKWDEAQFLDADRHWKRRKIK 924
F+PGFSE F KL+RAHGVEVVF KPVSLQSELCNLKPPRD RL+RKDVVYKV CGECGVSYIGETAQ RFTDRAKQHQYSVRTEDDNNGF G LFKWDEAQFLDADRHWKRRKIK
Sbjct: 2 FLPGFSENFAKLMRAHGVEVVFTKPVSLQSELCNLKPPRD-RLQRKDVVYKVDCGECGVSYIGETAQ-RFTDRAKQHQYSVRTEDDNNGFXXXXXXXXGVGGEEERGTGVELFKWDEAQFLDADRHWKRRKIK 132
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A6V1VJ74_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJ74_HETAK) HSP 1 Score: 188 bits (478), Expect = 7.460e-55 Identity = 99/126 (78.57%), Postives = 102/126 (80.95%), Query Frame = 1
Query: 598 VRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHG------------LFKWDEAQFLDADRHWKRRKIKESLYI 939
+RAHGVEVVF KPVSLQSELCNLKPPRD +L+RKDVVYKV CGECGVSYIGETAQ RFTDRAKQHQYSVRTEDDNNGF G LFKWDEAQFLDADRHWKRRKIKESLYI
Sbjct: 1 MRAHGVEVVFTKPVSLQSELCNLKPPRD-KLQRKDVVYKVDCGECGVSYIGETAQ-RFTDRAKQHQYSVRTEDDNNGFXXXXXXXXGVGGEEERGTGVELFKWDEAQFLDADRHWKRRKIKESLYI 124
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A7S4DE54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE54_HETAK) HSP 1 Score: 177 bits (448), Expect = 6.170e-52 Identity = 96/127 (75.59%), Postives = 100/127 (78.74%), Query Frame = 1
Query: 598 VRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHG------------LFKWDEAQFLDADRH-WKRRKIKESLYI 939
+RAHGVEVVF KPVSLQSELCNLKPPRD +L+RKDVVYKV CGECGVSYIGETAQ RFTDRAKQHQYSVRTEDDNNGF G L KWDEAQ LDADRH WKRRKIK+SLYI
Sbjct: 1 MRAHGVEVVFTKPVSLQSELCNLKPPRD-KLQRKDVVYKVDCGECGVSYIGETAQ-RFTDRAKQHQYSVRTEDDNNGFXXXXXXXXGVGGEEERGTGVELLKWDEAQSLDADRHCWKRRKIKKSLYI 125
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A147BJ37_IXORI (Putative tick transposon (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BJ37_IXORI) HSP 1 Score: 163 bits (412), Expect = 6.510e-44 Identity = 99/318 (31.13%), Postives = 164/318 (51.57%), Query Frame = 1
Query: 1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYIINNN 951
+G ++S +A + + +++ + + PTL++R DD F + E + L H+N IQFT+ERE NG L FLD+ +E G + VY+K TH RYLH+ S+HP K V+ L RA +C E L+ E+ +K + KN YP R V++++ + + P++ G SE +++R +GV V + PVS L R + + + ++Y++ C EC SY+GET + F +R ++H+Y V+ D N HA + +D + LD +R+W++R + ES +I N N
Sbjct: 22 MGVAVSITVANLTMEAIEQKALST--FSPIPTLFLRYVDDCFCVAKTSE--VDRLHKHLNSIHPDIQFTVERESNGRLPFLDVCVEKTGNHLTFQVYRKATHTGRYLHFSSDHPTTHKSSVVSALFRRALTVCSTNESLKMEVDIIKRD-LRKNNYPT-RFVNKIYKKLRQPSTSKNKGTASRMCVPYLHGTSEVLARVLRPYGVAVAHQ-PVSTLGHFLPLPKDRPPKGKAQGLIYRIPCAECDASYVGET--KNFPERLRRHKYDVKKNDIQGNALAEHAQKTGHVIGFDSSSILDRERNWRKRLLIESWHIQNTN 330
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: UPI001C91F7F2 (uncharacterized protein LOC122370714 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91F7F2) HSP 1 Score: 163 bits (413), Expect = 3.480e-43 Identity = 106/308 (34.42%), Postives = 163/308 (52.92%), Query Frame = 1
Query: 1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAV---REVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRT-EDDNNGFFVHAAHHHGLFKWDEAQFLDADRHWKR 912
+G S+S +A Y+ ++ + S K PTLW R DD FI+W HG+E LQE +N IQFT+ERE + L FLD+ ++ ++ TSVY+K T YL + S+HP K G+++C+ RA R+C ++ E S ++D F++ NGYP R + R AS E + + P+VPG SE+ K++R H ++V K L+ L N+K P + ++K VY++ C CG SYIGE+ + + DR K+H ++ D + H G EA+ L + HWK+
Sbjct: 156 MGLSLSVVLANAYMEHLEQSILTSATLK--PTLWRRYVDDTFILWPHGDEALQEFHQRLNDFCPSIQFTLEREVDQKLPFLDVLVQRSEGRLGTSVYRKATASNVYLKYNSSHPAAMKAGLIRCMEARARRVCSDMSSVKEEKSKIRDVFVA-NGYPEPFIKRAMRRRDASQTVQGEAAARDQEAYAAVPYVPGLSERIAKVLRPHRIKVAHKSK-RLRGHLVNVKDPVEQS-KKKGAVYEIKCS-CGSSYIGESGRPK-QDRLKEHTADIKHGRCDTSATARHFCTCGGDLNPFEARTLAIEPHWKK 456
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: UPI001BB2C68D (uncharacterized protein LOC121430263 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2C68D) HSP 1 Score: 167 bits (423), Expect = 4.600e-43 Identity = 107/321 (33.33%), Postives = 166/321 (51.71%), Query Frame = 1
Query: 1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGE-KVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEED----KPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRL--RRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
+G +S IA +Y+ F+E +++ + P +W R DD FI+ D LL++VN Q+ I+FTMERE N +AFLD + E ++ T+VY+K TH +YL + S+HP+ K GV+KCL RA R+ + + E + +S NGYP R F + V + EED K T+ PFV S + + + + + VFK +++ +L P+D L R VVYK+ CG C YIGET + +R +H+ V+ D++ HA + WDE + D+HW R++KE++ I
Sbjct: 310 MGSPVSAVIANLYMESFEEDALHACPPEFSPRIWKRYVDDTFIVTDRSTTDC--LLNYVNAQQPSIRFTMEREDNNRIAFLDTLVHRDDEGRLTTTVYRKPTHTDQYLAYDSHHPQSVKRGVVKCLYDRASRIVSKPQCTAAEKQRIASALVS-NGYP------RSFLNRVTKRKNVAEEDIVRCKSTVVLPFVDSISRQLRRHLEKYSIRAVFKSDTTIRKQLVR---PKDPALPGRLDGVVYKIPCGACDKVYIGETGRP-VNERMLEHRRDVKHRRIDSSAVAEHAWNADHPPNWDEVSCIARDKHWYTRRVKEAIQI 617
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A131Y5Y9_IXORI (Putative tick transposon (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131Y5Y9_IXORI) HSP 1 Score: 160 bits (404), Expect = 5.840e-43 Identity = 96/314 (30.57%), Postives = 164/314 (52.23%), Query Frame = 1
Query: 1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
+G ++S +A + + + + + + PT+++R DD F + E + L H+N E IQFT+ERE NG + FLD+ ++ G + VY+K TH RYL++ S+HP K V+ L RA +C ++ L+ E+ +K + KN YP R V+ ++ + + P++ G SE T+ +R +G+ V K PVS L R + + + +VY++ C +C SY+GET + FT+R ++H+Y V+ +D N HA + + +D + LD +R+WK+R ES +I
Sbjct: 3 MGAAVSVTVANLTMEAIETKALST--FLPTPTMFLRYVDDCFCVVKTSE--VDRLHIHLNSIEPNIQFTVERESNGCIPFLDVSVKKSGNLLTFQVYRKPTHTGRYLNFLSDHPTSHKSSVVSALFRRAITVCSTDKALKEEVDIIKRD-LRKNAYPT-RFVNNIYKKLCHPSAAEKTHPSSRMCVPYLRGTSEVLTRALRPYGIAVTHK-PVSTIGHHLPLPKDRHPKEKAQGLVYRIPCADCKASYVGET--KNFTERLRRHKYDVKKKDVQGNALAEHAEKTNHVIDFDSSSVLDTERNWKKRLYLESWHI 307
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A1B6GFD0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6GFD0_9HEMI) HSP 1 Score: 159 bits (403), Expect = 2.440e-42 Identity = 105/320 (32.81%), Postives = 163/320 (50.94%), Query Frame = 1
Query: 4 GKSISCPIAGIYLNWFKEQFIYSDRC--KHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYP--AVREVDRVFASYVPGVEVGEEEDKPTIFA-PFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVR---TEDDNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
G ++ P++ I+ N F E+F + KP +W R DD F+++ HG+ KL E L H+N I+ TME E L FLD+ + + + T+V+QK TH +YL++ SNH K K GV L RA LC ++ L+ E ++ S NGYP + + R +P V ++ DK + P+VPG SEK ++ R + + FK +L+ L KP ++ K+ VY + C C YIGET ++ R K+H+ + R TE + HH WDEA+ + + H+ +RK+ E+ YI
Sbjct: 52 GMAMGSPLSPIFANIFMEEFEQKALALAQFKPKIWWRYVDDTFVVFPHGDTKLNEFLDHINSISPSIRLTMEVEVQNKLPFLDVCVLRDRDVLKTTVFQKKTHTGKYLNYHSNHQKSAKEGVAYSLFDRAKSLCSDKDGLKEEFKKVESDLRS-NGYPQSVINKCKRT-RKIIPE-SVNQKSDKFAFMSIPYVPGLSEKIRRVGRKYNIRTAFKTHNTLRQSLVKTKP-KNGTQDSKNCVYSIKCS-CDREYIGET-KRPLNVRIKEHKENTRKGLTEKSKIAHHCWSEDHH--MNWDEAKIIHREPHFFKRKLIEASYI 363
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A147BLP3_IXORI (Putative reverse transcriptase n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BLP3_IXORI) HSP 1 Score: 162 bits (411), Expect = 2.590e-41 Identity = 97/314 (30.89%), Postives = 166/314 (52.87%), Query Frame = 1
Query: 1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
+G ++S +A + + + + + + PT+++R DD F + E + L H+N E IQFT+ERE NG + FLD+ ++ G + VY+K TH RYL++ S+HP K V+ L RA +C ++ L+ E+ +K + KN YP R V+ ++ + + P++ G SE T+ +R +G+ V K PVS L R + + + +VY++ C +C SY+GET + FT+R ++H+Y V+ +D N HA ++ + +D + LDA+R+WK+R ES +I
Sbjct: 456 MGAAVSVTVANLTMEAIETKALST--FLPTPTMFLRYVDDCFCVVKTSE--VDRLHIHLNSIEPNIQFTVERESNGCIPFLDVSVKKSGNLLTFQVYRKPTHTGRYLNFLSDHPTSHKSSVVSALFRRAITVCSTDKALKEEVDIIKRD-LRKNAYPT-RFVNNIYKKLCHPSAAEKTHPSSRMCVPYLRGTSEVLTRALRPYGIAVTHK-PVSTIGHHLPLPKDRHPKEKAQGLVYRIPCADCKASYVGET--KNFTERLRRHKYDVKKKDVQGNALAEHAEKNNHVIDFDSSSVLDAERNWKKRLYLESWHI 760 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1210.9.1 >prot_H-akashiwo_Contig1210.9.1 ID=prot_H-akashiwo_Contig1210.9.1|Name=mRNA_H-akashiwo_Contig1210.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=317bp IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEback to top mRNA from alignment at H-akashiwo_Contig1210:236847..237833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1210.9.1 ID=mRNA_H-akashiwo_Contig1210.9.1|Name=mRNA_H-akashiwo_Contig1210.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=987bp|location=Sequence derived from alignment at H-akashiwo_Contig1210:236847..237833+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1210:236847..237833+ >mRNA_H-akashiwo_Contig1210.9.1 ID=mRNA_H-akashiwo_Contig1210.9.1|Name=mRNA_H-akashiwo_Contig1210.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig1210:236847..237833+ (Heterosigma akashiwo CCMP452)back to top |