mRNA_H-akashiwo_Contig1210.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1210.9.1
Unique NamemRNA_H-akashiwo_Contig1210.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A6V1V4J2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V4J2_HETAK)

HSP 1 Score: 367 bits (943), Expect = 2.950e-123
Identity = 178/189 (94.18%), Postives = 182/189 (96.30%), Query Frame = 1
Query:    1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFV 567
            IGKSIS PIAGIYLNWF+EQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLK+E VGEKVVTSVY+K+TH FRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWEL FLKDQFIS NGYP VREVDRVFASYVPGVEV EEEDKPTIFAPFV
Sbjct:  207 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKETHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFIS-NGYP-VREVDRVFASYVPGVEVEEEEDKPTIFAPFV 393          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A7S3Y8W7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8W7_HETAK)

HSP 1 Score: 199 bits (505), Expect = 1.040e-60
Identity = 104/133 (78.20%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  562 FVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHG------------LFKWDEAQFLDADRHWKRRKIK 924
            F+PGFSE F KL+RAHGVEVVF KPVSLQSELCNLKPPRD RL+RKDVVYKV CGECGVSYIGETAQ RFTDRAKQHQYSVRTEDDNNGF        G            LFKWDEAQFLDADRHWKRRKIK
Sbjct:    2 FLPGFSENFAKLMRAHGVEVVFTKPVSLQSELCNLKPPRD-RLQRKDVVYKVDCGECGVSYIGETAQ-RFTDRAKQHQYSVRTEDDNNGFXXXXXXXXGVGGEEERGTGVELFKWDEAQFLDADRHWKRRKIK 132          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A6V1VJ74_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJ74_HETAK)

HSP 1 Score: 188 bits (478), Expect = 7.460e-55
Identity = 99/126 (78.57%), Postives = 102/126 (80.95%), Query Frame = 1
Query:  598 VRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHG------------LFKWDEAQFLDADRHWKRRKIKESLYI 939
            +RAHGVEVVF KPVSLQSELCNLKPPRD +L+RKDVVYKV CGECGVSYIGETAQ RFTDRAKQHQYSVRTEDDNNGF        G            LFKWDEAQFLDADRHWKRRKIKESLYI
Sbjct:    1 MRAHGVEVVFTKPVSLQSELCNLKPPRD-KLQRKDVVYKVDCGECGVSYIGETAQ-RFTDRAKQHQYSVRTEDDNNGFXXXXXXXXGVGGEEERGTGVELFKWDEAQFLDADRHWKRRKIKESLYI 124          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A7S4DE54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE54_HETAK)

HSP 1 Score: 177 bits (448), Expect = 6.170e-52
Identity = 96/127 (75.59%), Postives = 100/127 (78.74%), Query Frame = 1
Query:  598 VRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHG------------LFKWDEAQFLDADRH-WKRRKIKESLYI 939
            +RAHGVEVVF KPVSLQSELCNLKPPRD +L+RKDVVYKV CGECGVSYIGETAQ RFTDRAKQHQYSVRTEDDNNGF        G            L KWDEAQ LDADRH WKRRKIK+SLYI
Sbjct:    1 MRAHGVEVVFTKPVSLQSELCNLKPPRD-KLQRKDVVYKVDCGECGVSYIGETAQ-RFTDRAKQHQYSVRTEDDNNGFXXXXXXXXGVGGEEERGTGVELLKWDEAQSLDADRHCWKRRKIKKSLYI 125          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A147BJ37_IXORI (Putative tick transposon (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BJ37_IXORI)

HSP 1 Score: 163 bits (412), Expect = 6.510e-44
Identity = 99/318 (31.13%), Postives = 164/318 (51.57%), Query Frame = 1
Query:    1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYIINNN 951
            +G ++S  +A + +   +++ + +      PTL++R  DD F +    E  +  L  H+N     IQFT+ERE NG L FLD+ +E  G  +   VY+K TH  RYLH+ S+HP   K  V+  L  RA  +C   E L+ E+  +K   + KN YP  R V++++           +     +  P++ G SE   +++R +GV V  + PVS       L   R  + + + ++Y++ C EC  SY+GET  + F +R ++H+Y V+  D   N    HA     +  +D +  LD +R+W++R + ES +I N N
Sbjct:   22 MGVAVSITVANLTMEAIEQKALST--FSPIPTLFLRYVDDCFCVAKTSE--VDRLHKHLNSIHPDIQFTVERESNGRLPFLDVCVEKTGNHLTFQVYRKATHTGRYLHFSSDHPTTHKSSVVSALFRRALTVCSTNESLKMEVDIIKRD-LRKNNYPT-RFVNKIYKKLRQPSTSKNKGTASRMCVPYLHGTSEVLARVLRPYGVAVAHQ-PVSTLGHFLPLPKDRPPKGKAQGLIYRIPCAECDASYVGET--KNFPERLRRHKYDVKKNDIQGNALAEHAQKTGHVIGFDSSSILDRERNWRKRLLIESWHIQNTN 330          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: UPI001C91F7F2 (uncharacterized protein LOC122370714 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91F7F2)

HSP 1 Score: 163 bits (413), Expect = 3.480e-43
Identity = 106/308 (34.42%), Postives = 163/308 (52.92%), Query Frame = 1
Query:    1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAV---REVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRT-EDDNNGFFVHAAHHHGLFKWDEAQFLDADRHWKR 912
            +G S+S  +A  Y+   ++  + S   K  PTLW R  DD FI+W HG+E LQE    +N     IQFT+ERE +  L FLD+ ++    ++ TSVY+K T    YL + S+HP   K G+++C+  RA R+C     ++ E S ++D F++ NGYP     R + R  AS     E    + +     P+VPG SE+  K++R H ++V  K    L+  L N+K P +   ++K  VY++ C  CG SYIGE+ + +  DR K+H   ++    D +    H     G     EA+ L  + HWK+
Sbjct:  156 MGLSLSVVLANAYMEHLEQSILTSATLK--PTLWRRYVDDTFILWPHGDEALQEFHQRLNDFCPSIQFTLEREVDQKLPFLDVLVQRSEGRLGTSVYRKATASNVYLKYNSSHPAAMKAGLIRCMEARARRVCSDMSSVKEEKSKIRDVFVA-NGYPEPFIKRAMRRRDASQTVQGEAAARDQEAYAAVPYVPGLSERIAKVLRPHRIKVAHKSK-RLRGHLVNVKDPVEQS-KKKGAVYEIKCS-CGSSYIGESGRPK-QDRLKEHTADIKHGRCDTSATARHFCTCGGDLNPFEARTLAIEPHWKK 456          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: UPI001BB2C68D (uncharacterized protein LOC121430263 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2C68D)

HSP 1 Score: 167 bits (423), Expect = 4.600e-43
Identity = 107/321 (33.33%), Postives = 166/321 (51.71%), Query Frame = 1
Query:    1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGE-KVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEED----KPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRL--RRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
            +G  +S  IA +Y+  F+E  +++   +  P +W R  DD FI+ D        LL++VN Q+  I+FTMERE N  +AFLD  +    E ++ T+VY+K TH  +YL + S+HP+  K GV+KCL  RA R+  + +    E   +    +S NGYP      R F + V   +   EED    K T+  PFV   S +  + +  + +  VFK   +++ +L     P+D  L  R   VVYK+ CG C   YIGET +    +R  +H+  V+    D++    HA +      WDE   +  D+HW  R++KE++ I
Sbjct:  310 MGSPVSAVIANLYMESFEEDALHACPPEFSPRIWKRYVDDTFIVTDRSTTDC--LLNYVNAQQPSIRFTMEREDNNRIAFLDTLVHRDDEGRLTTTVYRKPTHTDQYLAYDSHHPQSVKRGVVKCLYDRASRIVSKPQCTAAEKQRIASALVS-NGYP------RSFLNRVTKRKNVAEEDIVRCKSTVVLPFVDSISRQLRRHLEKYSIRAVFKSDTTIRKQLVR---PKDPALPGRLDGVVYKIPCGACDKVYIGETGRP-VNERMLEHRRDVKHRRIDSSAVAEHAWNADHPPNWDEVSCIARDKHWYTRRVKEAIQI 617          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A131Y5Y9_IXORI (Putative tick transposon (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131Y5Y9_IXORI)

HSP 1 Score: 160 bits (404), Expect = 5.840e-43
Identity = 96/314 (30.57%), Postives = 164/314 (52.23%), Query Frame = 1
Query:    1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
            +G ++S  +A + +   + + + +      PT+++R  DD F +    E  +  L  H+N  E  IQFT+ERE NG + FLD+ ++  G  +   VY+K TH  RYL++ S+HP   K  V+  L  RA  +C  ++ L+ E+  +K   + KN YP  R V+ ++          +      +  P++ G SE  T+ +R +G+ V  K PVS       L   R  + + + +VY++ C +C  SY+GET  + FT+R ++H+Y V+ +D   N    HA   + +  +D +  LD +R+WK+R   ES +I
Sbjct:    3 MGAAVSVTVANLTMEAIETKALST--FLPTPTMFLRYVDDCFCVVKTSE--VDRLHIHLNSIEPNIQFTVERESNGCIPFLDVSVKKSGNLLTFQVYRKPTHTGRYLNFLSDHPTSHKSSVVSALFRRAITVCSTDKALKEEVDIIKRD-LRKNAYPT-RFVNNIYKKLCHPSAAEKTHPSSRMCVPYLRGTSEVLTRALRPYGIAVTHK-PVSTIGHHLPLPKDRHPKEKAQGLVYRIPCADCKASYVGET--KNFTERLRRHKYDVKKKDVQGNALAEHAEKTNHVIDFDSSSVLDTERNWKKRLYLESWHI 307          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A1B6GFD0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6GFD0_9HEMI)

HSP 1 Score: 159 bits (403), Expect = 2.440e-42
Identity = 105/320 (32.81%), Postives = 163/320 (50.94%), Query Frame = 1
Query:    4 GKSISCPIAGIYLNWFKEQFIYSDRC--KHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYP--AVREVDRVFASYVPGVEVGEEEDKPTIFA-PFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVR---TEDDNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
            G ++  P++ I+ N F E+F        + KP +W R  DD F+++ HG+ KL E L H+N     I+ TME E    L FLD+ +    + + T+V+QK TH  +YL++ SNH K  K GV   L  RA  LC  ++ L+ E   ++    S NGYP   + +  R     +P   V ++ DK    + P+VPG SEK  ++ R + +   FK   +L+  L   KP ++     K+ VY + C  C   YIGET ++    R K+H+ + R   TE         +  HH    WDEA+ +  + H+ +RK+ E+ YI
Sbjct:   52 GMAMGSPLSPIFANIFMEEFEQKALALAQFKPKIWWRYVDDTFVVFPHGDTKLNEFLDHINSISPSIRLTMEVEVQNKLPFLDVCVLRDRDVLKTTVFQKKTHTGKYLNYHSNHQKSAKEGVAYSLFDRAKSLCSDKDGLKEEFKKVESDLRS-NGYPQSVINKCKRT-RKIIPE-SVNQKSDKFAFMSIPYVPGLSEKIRRVGRKYNIRTAFKTHNTLRQSLVKTKP-KNGTQDSKNCVYSIKCS-CDREYIGET-KRPLNVRIKEHKENTRKGLTEKSKIAHHCWSEDHH--MNWDEAKIIHREPHFFKRKLIEASYI 363          
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Match: A0A147BLP3_IXORI (Putative reverse transcriptase n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BLP3_IXORI)

HSP 1 Score: 162 bits (411), Expect = 2.590e-41
Identity = 97/314 (30.89%), Postives = 166/314 (52.87%), Query Frame = 1
Query:    1 IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKDTHVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQFISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLVRAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIGETAQQRFTDRAKQHQYSVRTED-DNNGFFVHAAHHHGLFKWDEAQFLDADRHWKRRKIKESLYI 939
            +G ++S  +A + +   + + + +      PT+++R  DD F +    E  +  L  H+N  E  IQFT+ERE NG + FLD+ ++  G  +   VY+K TH  RYL++ S+HP   K  V+  L  RA  +C  ++ L+ E+  +K   + KN YP  R V+ ++          +      +  P++ G SE  T+ +R +G+ V  K PVS       L   R  + + + +VY++ C +C  SY+GET  + FT+R ++H+Y V+ +D   N    HA  ++ +  +D +  LDA+R+WK+R   ES +I
Sbjct:  456 MGAAVSVTVANLTMEAIETKALST--FLPTPTMFLRYVDDCFCVVKTSE--VDRLHIHLNSIEPNIQFTVERESNGCIPFLDVSVKKSGNLLTFQVYRKPTHTGRYLNFLSDHPTSHKSSVVSALFRRAITVCSTDKALKEEVDIIKRD-LRKNAYPT-RFVNNIYKKLCHPSAAEKTHPSSRMCVPYLRGTSEVLTRALRPYGIAVTHK-PVSTIGHHLPLPKDRHPKEKAQGLVYRIPCADCKASYVGET--KNFTERLRRHKYDVKKKDVQGNALAEHAEKNNHVIDFDSSSVLDAERNWKKRLYLESWHI 760          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1210.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1V4J2_HETAK2.950e-12394.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8W7_HETAK1.040e-6078.20Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A6V1VJ74_HETAK7.460e-5578.57Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S4DE54_HETAK6.170e-5275.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A147BJ37_IXORI6.510e-4431.13Putative tick transposon (Fragment) n=1 Tax=Ixodes... [more]
UPI001C91F7F23.480e-4334.42uncharacterized protein LOC122370714 n=1 Tax=Amphi... [more]
UPI001BB2C68D4.600e-4333.33uncharacterized protein LOC121430263 n=3 Tax=Lytec... [more]
A0A131Y5Y9_IXORI5.840e-4330.57Putative tick transposon (Fragment) n=1 Tax=Ixodes... [more]
A0A1B6GFD0_9HEMI2.440e-4232.81Uncharacterized protein (Fragment) n=1 Tax=Cuerna ... [more]
A0A147BLP3_IXORI2.590e-4130.89Putative reverse transcriptase n=1 Tax=Ixodes rici... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1210contigH-akashiwo_Contig1210:236847..237833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog28377.ENSACAP00000021908
PFAMsRVT_1
Model size951
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.56e-40
EggNOG OGs2CN36@1|root,2QTNN@2759|Eukaryota,38FJC@33154|Opisthokonta,3BM27@33208|Metazoa,3D0HQ@33213|Bilateria,48H4M@7711|Chordata
Cds size951
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387122.4031043-CDS-H-akashiwo_Contig1210:236846..2377041681387122.4031043-CDS-H-akashiwo_Contig1210:236846..237704Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1210 236847..237704 +
1681387122.4141352-CDS-H-akashiwo_Contig1210:237740..2378331681387122.4141352-CDS-H-akashiwo_Contig1210:237740..237833Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1210 237741..237833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1210.9.1prot_H-akashiwo_Contig1210.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1210 236847..237833 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1210.9.1

>prot_H-akashiwo_Contig1210.9.1 ID=prot_H-akashiwo_Contig1210.9.1|Name=mRNA_H-akashiwo_Contig1210.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=317bp
IGKSISCPIAGIYLNWFKEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEE
KLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKLESVGEKVVTSVYQKD
THVFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELSFLKDQF
ISKNGYPAVREVDRVFASYVPGVEVGEEEDKPTIFAPFVPGFSEKFTKLV
RAHGVEVVFKKPVSLQSELCNLKPPRDNRLRRKDVVYKVVCGECGVSYIG
ETAQQRFTDRAKQHQYSVRTEDDNNGFFVHAAHHHGLFKWDEAQFLDADR
HWKRRKIKESLYIINNN
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mRNA from alignment at H-akashiwo_Contig1210:236847..237833+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1210.9.1 ID=mRNA_H-akashiwo_Contig1210.9.1|Name=mRNA_H-akashiwo_Contig1210.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=987bp|location=Sequence derived from alignment at H-akashiwo_Contig1210:236847..237833+ (Heterosigma akashiwo CCMP452)
ATTGGCAAGTCCATCTCCTGTCCCATTGCAGGTATATATTTGAACTGGTT CAAAGAACAGTTCATCTATAGTGACAGGTGCAAGCACAAGCCCACCCTGT GGGTGAGGATGAGGGATGATGTGTTCATCATTTGGGACCATGGGGAGGAG AAGCTACAGGAGCTGTTGAGCCATGTGAATGGCCAGGAGAAGCGGATCCA ATTCACGATGGAGAGAGAGAAGAATGGGGTGCTTGCCTTTCTGGACCTGA AGCTGGAGAGCGTGGGGGAGAAGGTGGTGACCAGCGTGTATCAGAAGGAC ACACACGTCTTTCGGTACCTGCATTGGAGGTCAAATCATCCCAAGAAGAC CAAGCTGGGGGTGATGAAGTGCCTCATCCATCGAGCCCATCGGCTGTGCG ACCGGGAGGAGGATCTGAGATGGGAGCTGAGTTTTCTCAAGGACCAGTTC ATCTCAAAAAATGGATACCCTGCTGTGCGTGAAGTGGACAGGGTGTTTGC CTCTTATGTGCCAGGGGTGGAGGTGGGGGAGGAGGAAGACAAGCCTACCA TTTTTGCTCCCTTTGTGCCTGGTTTTTCTGAAAAGTTCACCAAGCTGGTG CGCGCTCATGGGGTGGAGGTGGTGTTCAAAAAGCCAGTGTCATTGCAGAG TGAGTTGTGCAACCTAAAACCCCCCAGAGACAACAGGCTGCGGCGCAAGG ATGTGGTCTACAAGGTGGTTTGTGGAGAATGCGGGGTGTCCTACATTGGG GAGACTGCACAACAACGGTTCACTGATAGGGCAAAGCAGCATCAGTATAG CGTGCGGACTGAGGATGACAACAATGGCTTCTTTGTCCATGCAGCACACC ACCATGGAGTAGGAGGGGAGGAGGAGAGGGGAACTGGGGTGGAGCTGTTC AAGTGGGATGAAGCTCAGTTCTTGGACGCAGATCGCCACTGGAAGAGAAG GAAAATCAAGGAGTCCCTTTACATCATCAATAATAAT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1210:236847..237833+

>mRNA_H-akashiwo_Contig1210.9.1 ID=mRNA_H-akashiwo_Contig1210.9.1|Name=mRNA_H-akashiwo_Contig1210.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig1210:236847..237833+ (Heterosigma akashiwo CCMP452)
ATTGGCAAGTCCATCTCCTGTCCCATTGCAGGTATATATTTGAACTGGTT
CAAAGAACAGTTCATCTATAGTGACAGGTGCAAGCACAAGCCCACCCTGT
GGGTGAGGATGAGGGATGATGTGTTCATCATTTGGGACCATGGGGAGGAG
AAGCTACAGGAGCTGTTGAGCCATGTGAATGGCCAGGAGAAGCGGATCCA
ATTCACGATGGAGAGAGAGAAGAATGGGGTGCTTGCCTTTCTGGACCTGA
AGCTGGAGAGCGTGGGGGAGAAGGTGGTGACCAGCGTGTATCAGAAGGAC
ACACACGTCTTTCGGTACCTGCATTGGAGGTCAAATCATCCCAAGAAGAC
CAAGCTGGGGGTGATGAAGTGCCTCATCCATCGAGCCCATCGGCTGTGCG
ACCGGGAGGAGGATCTGAGATGGGAGCTGAGTTTTCTCAAGGACCAGTTC
ATCTCAAAAAATGGATACCCTGCTGTGCGTGAAGTGGACAGGGTGTTTGC
CTCTTATGTGCCAGGGGTGGAGGTGGGGGAGGAGGAAGACAAGCCTACCA
TTTTTGCTCCCTTTGTGCCTGGTTTTTCTGAAAAGTTCACCAAGCTGGTG
CGCGCTCATGGGGTGGAGGTGGTGTTCAAAAAGCCAGTGTCATTGCAGAG
TGAGTTGTGCAACCTAAAACCCCCCAGAGACAACAGGCTGCGGCGCAAGG
ATGTGGTCTACAAGGTGGTTTGTGGAGAATGCGGGGTGTCCTACATTGGG
GAGACTGCACAACAACGGTTCACTGATAGGGCAAAGCAGCATCAGTATAG
CGTGCGGACTGAGGATGACAACAATGGCTTCTTTGTCCATGCAGCACACC
ACCATGGACTGTTCAAGTGGGATGAAGCTCAGTTCTTGGACGCAGATCGC
CACTGGAAGAGAAGGAAAATCAAGGAGTCCCTTTACATCATCAATAATAA
T
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