mRNA_H-akashiwo_Contig1210.11.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A7S3XMV2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMV2_HETAK) HSP 1 Score: 176 bits (445), Expect = 2.030e-55 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG
Sbjct: 37 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 116
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A7S2UUU6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUU6_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.360e-30 Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 3
Query: 6 RWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
+WG+ T+W WGP SGILPCPVYLRHCVLA +KQ+ + D+FLDETYLAD TTIR+YL+ P IM +PP+ L RY+G
Sbjct: 188 KWGLPTVWGWGPDSGILPCPVYLRHCVLAVKKQSQEILDNFLDETYLADRITTIRQYLDQNPHIMECIPPESLKFRYNG 266
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A835ZBZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ6_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.390e-28 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 3
Query: 3 GRWGINTIWN-WGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
G +GI ++W+ W P SGILPCPVYLRHC+LAA Q V DSFLDET+L+D TT+R++L RPDIM T PP LIGRYSG
Sbjct: 150 GAYGITSVWDAWHPGSGILPCPVYLRHCMLAATAQGSRVLDSFLDETFLSDRVTTVRQHLHARPDIMETEPPAHLIGRYSG 230
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A7S0BZ49_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ49_9STRA) HSP 1 Score: 104 bits (260), Expect = 5.430e-27 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
G++ I TIWNW P+S + PC YLRHCVL+A+ D +SFLD+TYL D KTTIREYL PDIM LPP +L RY G
Sbjct: 54 GKYNITTIWNWSPSSELRPCATYLRHCVLSARNMGDKCYNSFLDDTYLVDRKTTIREYLNSYPDIMDRLPPPELAERYGG 133
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A813G5U5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G5U5_POLGL) HSP 1 Score: 106 bits (265), Expect = 3.000e-26 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
GR+GI TIW GP SG+LPCPVYLRHCVLA K SFLD+T+L D +T+IREYLE RP+IM PP +L RY+G
Sbjct: 200 GRFGITTIWGHGPDSGVLPCPVYLRHCVLAVTKAGPEAHRSFLDDTFLVDRRTSIREYLERRPEIMELQPPPELAERYNG 279
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A8J2S4U8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4U8_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.130e-26 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
GR+G+ IW W G PCPVYLRHCVLAA+K DSFLDET+L D +TT+R +L P++M T PP +L+GRYSG
Sbjct: 150 GRYGVQQIWGWPRDCGATPCPVYLRHCVLAAEKAGRVASDSFLDETWLVDRETTVRAFLATHPEVMATRPPPELVGRYSG 229
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A067BZY5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZY5_SAPPC) HSP 1 Score: 102 bits (255), Expect = 2.480e-25 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
G++G++TIW WGP SGILPC VYLRHC+L+ K + VR FL ++L D +TT+ Y+ P+IM LPP L+GRYSG
Sbjct: 138 GQYGLDTIWGWGPESGILPCRVYLRHCLLSVAKLGEQVRTDFLKHSFLGDRQTTVEAYIAAHPEIMDALPPPSLVGRYSG 217
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A7S1BJH0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJH0_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.310e-25 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
G++GI TIW WG SG+ PC VYLRHCVLA++K +SFLDETYL D KTT+R+YL+ D+M LPP DL RY G
Sbjct: 235 GKYGIKTIWGWGEDSGLKPCSVYLRHCVLASEKLGTECHESFLDETYLVDRKTTVRDYLKNNSDLMEMLPPKDLRERYCG 314
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A1V9YVZ4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVZ4_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.680e-25 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 3
Query: 3 GRWGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
G++G+ T+W WGP SGILPC VYLRHC+L+ K + V + F+ ++L D KTTI+EY+ P+IM PP L+GRYSG
Sbjct: 136 GKFGLTTVWGWGPDSGILPCRVYLRHCLLSVAKLGETVYEDFVQNSFLGDRKTTIKEYITKHPEIMDAQPPASLVGRYSG 215
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Match: A0A024TQX7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQX7_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.460e-24 Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 3
Query: 9 WGINTIWNWGPASGILPCPVYLRHCVLAAQKQADFVRDSFLDETYLADCKTTIREYLELRPDIMTTLPPDDLIGRYSG 242
+G++TIW + +SGILPC VYLRHC+LA QK + V D F+ T+L D KTTI+ YL P IMTT+PP L+GRYSG
Sbjct: 142 YGLDTIWGYNASSGILPCRVYLRHCILAVQKLGEDVYDDFVQNTFLGDRKTTIQTYLAENPTIMTTVPPPHLVGRYSG 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1210.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1210.11.1 >prot_H-akashiwo_Contig1210.11.1 ID=prot_H-akashiwo_Contig1210.11.1|Name=mRNA_H-akashiwo_Contig1210.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=62bp TGGGGSTPSGTGARPRASFPAQCTLGTACWRPRNRLILSGIAFWTKPILLback to top mRNA from alignment at H-akashiwo_Contig1210:308451..314810+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1210.11.1 ID=mRNA_H-akashiwo_Contig1210.11.1|Name=mRNA_H-akashiwo_Contig1210.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=6360bp|location=Sequence derived from alignment at H-akashiwo_Contig1210:308451..314810+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1210:308451..314810+ >mRNA_H-akashiwo_Contig1210.11.1 ID=mRNA_H-akashiwo_Contig1210.11.1|Name=mRNA_H-akashiwo_Contig1210.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=186bp|location=Sequence derived from alignment at H-akashiwo_Contig1210:308451..314810+ (Heterosigma akashiwo CCMP452)back to top |