mRNA_H-akashiwo_Contig121.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A7S2XYD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYD5_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.930e-41 Identity = 62/72 (86.11%), Postives = 69/72 (95.83%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGDD 622
GTFNNWEKQ+PMHRSGNDFTYIHNL KGKHA+KFIVDDEWRFAPDQPTVAD+EGR+NNFIDV+ F PYTG++
Sbjct: 51 GTFNNWEKQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVSNFHPYTGEE 122
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A7S2WI24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI24_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.940e-40 Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGDD 622
GTFNNWEKQ+PMHRSGNDFTYIHNL KGKHAYKFIVDDEWRFAPDQPTVAD+EGR+NNFIDV+ F YTGDD
Sbjct: 76 GTFNNWEKQIPMHRSGNDFTYIHNLKKGKHAYKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFVAYTGDD 147
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A836CBZ2_9STRA (AMPKBI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ2_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.720e-39 Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGDDE 625
GTFNNWEKQ+PMHRSGNDFTYIH+L +GKHA+KFIVDDEWRFAPDQPTVAD+EGRVNNFIDV+ F YTGDD+
Sbjct: 92 GTFNNWEKQIPMHRSGNDFTYIHDLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGDDD 164
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A835ZG75_9STRA (AMPKBI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG75_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.430e-39 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGDDE 625
GTFNNWEKQ+PMHRSGNDFTYIH+L KGKHA+KFIVDDEWRFAPDQPTVAD+EGRVNNFIDV+ F YTG+DE
Sbjct: 100 GTFNNWEKQIPMHRSGNDFTYIHDLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSDFVAYTGEDE 172
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A7S2AZ02_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZ02_9STRA) HSP 1 Score: 143 bits (361), Expect = 8.170e-39 Identity = 60/73 (82.19%), Postives = 69/73 (94.52%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGDDE 625
GTFNNWEKQ+PMHRSGNDFTYIHNL KGKHA+KFIVDDEWRFAPDQ T+AD+EGR+NNFIDV+ F+ YTG+D+
Sbjct: 100 GTFNNWEKQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQQTIADIEGRINNFIDVSEFKAYTGEDD 172
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A7S0C984_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C984_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.390e-38 Identity = 60/71 (84.51%), Postives = 67/71 (94.37%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGD 619
GTFN W +Q+PMHRSGNDFTYIHNL KGKHA+KFIVDDEWRFAPDQPTVAD+EGR+NNFIDV+ F+PYTGD
Sbjct: 124 GTFNGWSRQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFKPYTGD 194
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A1Z5KQT3_FISSO (5'-AMP-activated protein kinase, regulatory beta subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQT3_FISSO) HSP 1 Score: 141 bits (356), Expect = 5.870e-38 Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGD 619
GTFNNW +Q+PMHRSGNDFTYIHNL +GKHA+KFIVDDEWRFAPDQPTVAD+EGR+NNFIDV F+ YTGD
Sbjct: 76 GTFNNWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTGFKAYTGD 146
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A7S2BL33_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL33_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.330e-37 Identity = 62/74 (83.78%), Postives = 69/74 (93.24%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRP-YTGDDE 625
GTFNNWEKQ+ MHRSGNDFTYIHNL KGKHA+KFIVDDEWRFAPDQPTVAD+EGR+NNFIDV+ F+ YTGDD+
Sbjct: 86 GTFNNWEKQIQMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFQQAYTGDDD 159
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A1E7FDS3_9STRA (AMPKBI-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDS3_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.600e-37 Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGDDE 625
GTFN W +Q+PMHRSGNDFTYIHNL +GKHA+KFIVDDEWRFAPDQPTVAD+EGR+NNFIDV F+PYTGD E
Sbjct: 143 GTFNGWSRQIPMHRSGNDFTYIHNLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVTDFKPYTGDRE 215
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Match: A0A7S2LHN5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHN5_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.640e-37 Identity = 60/71 (84.51%), Postives = 66/71 (92.96%), Query Frame = 2
Query: 407 GTFNNWEKQLPMHRSGNDFTYIHNLTKGKHAYKFIVDDEWRFAPDQPTVADVEGRVNNFIDVAAFRPYTGD 619
GTFN W KQ+PMHRSGNDFTYIHNL KGKHA+KFIVDDEWRFAPDQPTVAD+EGR+NNFIDV+ F+ YTGD
Sbjct: 155 GTFNGWSKQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFKAYTGD 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig121.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig121.4.1 >prot_H-akashiwo_Contig121.4.1 ID=prot_H-akashiwo_Contig121.4.1|Name=mRNA_H-akashiwo_Contig121.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=160bp MGNFSGREEDGNLEEDFVPRHPSGRTVGGPSRFESRGFQIPGDEKKPGGSback to top mRNA from alignment at H-akashiwo_Contig121:194235..197500- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig121.4.1 ID=mRNA_H-akashiwo_Contig121.4.1|Name=mRNA_H-akashiwo_Contig121.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3266bp|location=Sequence derived from alignment at H-akashiwo_Contig121:194235..197500- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig121:194235..197500- >mRNA_H-akashiwo_Contig121.4.1 ID=mRNA_H-akashiwo_Contig121.4.1|Name=mRNA_H-akashiwo_Contig121.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=480bp|location=Sequence derived from alignment at H-akashiwo_Contig121:194235..197500- (Heterosigma akashiwo CCMP452)back to top |