mRNA_H-akashiwo_Contig121.17.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A4D9D0D3_9STRA (Cytochrome c domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0D3_9STRA) HSP 1 Score: 372 bits (955), Expect = 1.890e-124 Identity = 172/256 (67.19%), Postives = 212/256 (82.81%), Query Frame = 1
Query: 169 VGALFAAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSYL 936
+GAL A A A GVA+ + DH+PS+DYGW+HHG++A+YD ++RRGFQVYR+VCASCH++ FRNLVGVTHTE E+K+IA Y+V DGP+ EGEMFERP KLSD IP PY N++ R AN GA PPDLSL+ KARPGG+DYIFALLTGY+DPPE + +L GL+YNPYFPGGAI+M +QL+DGQ+EYEDGTPAT +QM+KDV TFLAWAAEPEHD RKK G++W+ AL A+ +TG+YKRFRW+PLKT K Y+
Sbjct: 27 MGALVAGTAVAGGVAVCS-ADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVATFLAWAAEPEHDYRKKAGVQWIGALLVALALTGFYKRFRWSPLKTAKFHYV 281
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A7R9YFS8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFS8_9STRA) HSP 1 Score: 359 bits (921), Expect = 1.410e-119 Identity = 171/255 (67.06%), Postives = 208/255 (81.57%), Query Frame = 1
Query: 172 GALFAAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSYL 936
G L AA A GVA ++D DHIPSL+ GW+H+G ++YD ++RRGFQVY++VC+SCHS+ R+ FRNLVGV TE + K++A YE+ DGP+DEGEMFERP KLSD IP P+ NE+ R AN GA PPDLSL+ KARPGG+DYIF+LLTGYV+ PE +TML GLHYNPYFPGGAI+M KQL DGQVEYEDGTPAT +QMAKDV TFLAW AEPEHD+RKK G++ + AL A LITGYYKRFR++PLKTR+ +Y+
Sbjct: 10 GVLGAAAATTGGVAFASD-DHIPSLNPGWTHNGFFSSYDYKAVRRGFQVYKEVCSSCHSLERIAFRNLVGVCFTEDQAKKLAESYEIVDGPNDEGEMFERPGKLSDYIPGPHANEEAARAANNGAYPPDLSLITKARPGGVDYIFSLLTGYVEAPEGKTMLSGLHYNPYFPGGAIAMPKQLMDGQVEYEDGTPATESQMAKDVATFLAWCAEPEHDERKKAGVRILAALFVAFLITGYYKRFRYSPLKTRQITYV 263
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A024GLL4_9STRA (Cytochrome c domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GLL4_9STRA) HSP 1 Score: 358 bits (918), Expect = 4.960e-119 Identity = 167/254 (65.75%), Postives = 211/254 (83.07%), Query Frame = 1
Query: 172 GALFAAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSY 933
GAL + G+ TGV ND D + DYG+ H G ++++D AS+RRG+QVYR+VCASCHS+ R++FRNLVGVTHTE ++K +AA+ +VEDGP+D+GEMF+RP KLSDP+P PY N++ AN GA+PPDLSLMVKARPGG+DY+FALLTGYVDPPE + +L GL+YNPYF GGAI+M +QL+DGQ++YEDGTPAT +QMAKDV FLAWAAEPEHD+RKK G+K +LA+ A L+TGYYKR +WAPLK+RK SY
Sbjct: 17 GALVS-GSVLTGVTECND-DALSIPDYGFDHKGPLSSFDYASVRRGYQVYREVCASCHSLERISFRNLVGVTHTEEQVKALAADVDVEDGPNDQGEMFDRPGKLSDPLPKPYPNDEAAAAANNGAIPPDLSLMVKARPGGVDYLFALLTGYVDPPEGKELLSGLYYNPYFSGGAIAMERQLQDGQIDYEDGTPATTSQMAKDVAVFLAWAAEPEHDERKKQGMKVLLAMGALALLTGYYKRLKWAPLKSRKISY 268
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A0P5MCT1_9CRUS (Cytochrome c1, heme protein, mitochondrial (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A0P5MCT1_9CRUS) HSP 1 Score: 354 bits (909), Expect = 7.770e-118 Identity = 170/257 (66.15%), Postives = 211/257 (82.10%), Query Frame = 1
Query: 166 KVGALFAAGAAA-TGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSY 933
KVGA GA+ TGVA + D I +L YG+ H G ++++D AS+RRG+QVY++VCA+CHSV R+ FRNLVGVTHTE E+K +AA+ +V DGP+ EGEMFERP KLSDP+PSPY N++ AN GA+PPDLSL++K RPGG+DY+FALLTGYVDPPE + +LPGL+YNPYF GGAI+M +QL DGQ+EYEDGTPAT AQMAKDV FLAWA+EPEHD RKK G++ +LALSA +L+TGYYKR +WAPLKTRK +Y
Sbjct: 2 KVGAGAVLGASVLTGVAACSG-DQINALPYGFDHLGPLSSFDYASVRRGYQVYKEVCATCHSVERICFRNLVGVTHTEDEVKALAADIDVVDGPNAEGEMFERPGKLSDPLPSPYANDEAAAAANNGAIPPDLSLIIKGRPGGVDYLFALLTGYVDPPEGKELLPGLYYNPYFGGGAIAMERQLRDGQIEYEDGTPATTAQMAKDVAVFLAWASEPEHDVRKKQGMQTVLALSALVLLTGYYKRLKWAPLKTRKITY 257
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A2D4CAL0_PYTIN (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAL0_PYTIN) HSP 1 Score: 364 bits (935), Expect = 1.550e-116 Identity = 172/264 (65.15%), Postives = 217/264 (82.20%), Query Frame = 1
Query: 151 VKNLSKVGA-LFAAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSYLN 939
++ +KVGA G+ TGVA + D I +L+YG+ H G ++++D AS+RRG+QVY++VCA+CHSV R+ FRNL+GVTHTE E+K++AAE +V DGP+DEGEMFERP KLSDP+P PY N++ AN GA+PPDLSL+VKARPGG DY+FALLTGYVDPPE + +LPGL+YNPYF GGAI+M +QL DGQ+EYEDGTPAT +QMAKDV FLAWAAEPEHD+RKK G++ +LALSA +L+TGYYKR +WAPLKTRK +Y N
Sbjct: 8 MQKAAKVGAGALLGGSVLTGVAACSG-DQIDALNYGFDHQGPLSSFDYASVRRGYQVYKEVCATCHSVERICFRNLIGVTHTEEELKKMAAEIDVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARPGGADYLFALLTGYVDPPEGKELLPGLYYNPYFGGGAIAMERQLRDGQIEYEDGTPATTSQMAKDVSVFLAWAAEPEHDERKKMGMQTILALSAMVLLTGYYKRLKWAPLKTRKITYTN 270
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A7S2BRP9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BRP9_9STRA) HSP 1 Score: 350 bits (898), Expect = 6.040e-116 Identity = 169/252 (67.06%), Postives = 204/252 (80.95%), Query Frame = 1
Query: 184 AAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGV-THTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSYL 936
AA AA + V+L +D DH+P+LDYGW HHG +AAYD ++RRG+QVY++VCA+CHSV RV+FRNLV +E E+K IA E++ DGP+DEGEMFERP KL+DP+PSPY N+Q GR ANGGALPPDLSLMVK+R G+DYIFALLTGYVDPPE + ML GLHYNPYF G AI+M L DGQVE+ D TPATV+QMAKDV FLAWA+EPEHDDRKK G+KW+ AL + +G+YKRFR+A LKTR+ SYL
Sbjct: 24 AATAAVSSVSLCSD-DHVPALDYGWGHHGPLAAYDARAVRRGYQVYKEVCATCHSVQRVHFRNLVEYGAWSENEVKAIAEEFDYIDGPNDEGEMFERPGKLTDPLPSPYANDQAGRAANGGALPPDLSLMVKSRHAGVDYIFALLTGYVDPPEGKEMLSGLHYNPYFAGAAIAMPPPLMDGQVEFLDKTPATVSQMAKDVSVFLAWASEPEHDDRKKAGMKWIFALGICAVASGFYKRFRFASLKTRQISYL 274
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A7S1TQH4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQH4_9STRA) HSP 1 Score: 348 bits (893), Expect = 2.800e-115 Identity = 166/263 (63.12%), Postives = 208/263 (79.09%), Query Frame = 1
Query: 151 VKNLSKVGALFAAGAAATGVALS-NDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSYL 936
V+N ++ GA A A +G +L+ +DHIP+L+ GWSH+G ++YD S+RRGFQVY++VCA+CHSV + FRNLV V +E + K++A YE+EDGP+DEGEMFERP KLSD IP PY NE+ GR ANGGALPPDL+L+ KARP G +Y+F+LLTGYVDPPE + MLPGLHYNPYF GGAI+M L DG VEYEDGT AT +QMAKDV TFLAW AEPE DDRKK G++ + AL+ A L+TG+YKRFR++PLKTR+ SY+
Sbjct: 5 VRNYARRGATLAGAAVVSGGSLAFASDDHIPALNPGWSHNGAFSSYDYKSVRRGFQVYKEVCATCHSVEGIAFRNLVNVIFSEKQAKKLAESYEIEDGPNDEGEMFERPGKLSDYIPGPYANEEAGRAANGGALPPDLTLITKARPNGTNYVFSLLTGYVDPPEGKAMLPGLHYNPYFAGGAIAMPAPLTDGAVEYEDGTEATASQMAKDVSTFLAWCAEPEADDRKKNGVRIIGALTVAFLLTGFYKRFRYSPLKTRQISYV 267
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: G5AHH7_PHYSP (Cytochrome c domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=G5AHH7_PHYSP) HSP 1 Score: 348 bits (893), Expect = 3.000e-115 Identity = 170/263 (64.64%), Postives = 210/263 (79.85%), Query Frame = 1
Query: 151 VKNLSKVGA-LFAAGAAATGV-ALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSY 933
++ +KVGA G+ TGV A S+D+ I +L YG+ H G ++++D AS+RRG+QVYR+VCASCHS+ R+ FRNLVGVTHTEAE+KE+AA+ +V DGP+DEGEMFERP KLSDP+P PY N++ AN GA+PPDLSLMVKAR G DY+FALLTGYVDPPE +LPGL+YNPYF GGAI+M +QL+DGQ+EYEDGTP T +QMAKDV FLAWAAEPEHD RKK G++ +AL A +TGYYKR +WAPLKTRK +Y
Sbjct: 8 LQRAAKVGAGALLGGSVLTGVTAFSSDQ--IEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEAELKEMAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMVKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 268
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A662X5I4_9STRA (Cytochrome c domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5I4_9STRA) HSP 1 Score: 347 bits (890), Expect = 4.140e-114 Identity = 168/255 (65.88%), Postives = 209/255 (81.96%), Query Frame = 1
Query: 172 GALFAAGAAATGV-ALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDGPDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSY 933
GAL G+ TGV ALS+D+ I +L YG+ + G ++++D AS+RRG+QVYR+VCASCHS+ R+ FRNLVGVTHTEAE+KEIAA+ +VEDGP+DEGEMFERP KLSDP+P PY N++ +N GA+PPDLSL+VK+R GG DY+FALLTGYVDPPE +LPGL+YNPYF GGAI+M +QL+DGQ+EYEDGTP T +QMAKDV FLAWA+EPEHD RKK G++ +AL L+TGYYKR +WAPLKTRK +Y
Sbjct: 63 GALLG-GSVLTGVTALSSDQ--IEALHYGFDYQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEAELKEIAADIDVEDGPNDEGEMFERPGKLSDPLPRPYANDEAAAASNNGAIPPDLSLIVKSRHGGPDYLFALLTGYVDPPEGMELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWASEPEHDVRKKLGMQTAIALGTLCLLTGYYKRLKWAPLKTRKITY 314
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Match: A0A835Z587_9STRA (Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z587_9STRA) HSP 1 Score: 345 bits (884), Expect = 7.370e-114 Identity = 170/254 (66.93%), Postives = 198/254 (77.95%), Query Frame = 1
Query: 178 LFAAGAAATGVALSNDEDHIPSLDYGWSHHGVMAAYDTASIRRGFQVYRQVCASCHSVSRVNFRNLVGVTHTEAEMKEIAAEYEVEDG-PDDEGEMFERPAKLSDPIPSPYKNEQEGRLANGGALPPDLSLMVKARPGGIDYIFALLTGYVDPPETRTMLPGLHYNPYFPGGAISMGKQLEDGQVEYEDGTPATVAQMAKDVCTFLAWAAEPEHDDRKKGGLKWMLALSAAILITGYYKRFRWAPLKTRKTSYL 936
L A+ AA G AL ND D IPSL YGW G ++++D A+IRRGFQVYRQVC+SCHS+ ++FRN VGVTH EA K++A E+EV D P+D+GEMFERPAKL D P PY+NE EGR ANGGALPPDLSLM KAR GGIDY+FALLTGY D P + +LPGL+YNPYF GGAI+M L DGQVEYEDGTPATV QMAKDV FLAW AEPEHD+RKK G+K + L+ I IT YYKR RWAP+KTRK +Y+
Sbjct: 19 LTASAAAGAGAALCND-DCIPSLSYGWPQDGALSSFDHAAIRRGFQVYRQVCSSCHSIQYISFRNFVGVTHDEAGAKKLAEEFEVTDAQPNDDGEMFERPAKLFDRYPGPYRNEAEGRAANGGALPPDLSLMTKARHGGIDYVFALLTGYADSPAGKDLLPGLYYNPYFAGGAIAMPPPLMDGQVEYEDGTPATVTQMAKDVSQFLAWCAEPEHDERKKFGVKAVTVLALGIGITAYYKRLRWAPVKTRKITYM 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig121.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig121.17.1 >prot_H-akashiwo_Contig121.17.1 ID=prot_H-akashiwo_Contig121.17.1|Name=mRNA_H-akashiwo_Contig121.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=299bp MFASKILSSSVKGASSGARAQLSSVFKASSGGDQVKNLSKVGALFAAGAAback to top mRNA from alignment at H-akashiwo_Contig121:1369440..1378786- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig121.17.1 ID=mRNA_H-akashiwo_Contig121.17.1|Name=mRNA_H-akashiwo_Contig121.17.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=9347bp|location=Sequence derived from alignment at H-akashiwo_Contig121:1369440..1378786- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig121:1369440..1378786- >mRNA_H-akashiwo_Contig121.17.1 ID=mRNA_H-akashiwo_Contig121.17.1|Name=mRNA_H-akashiwo_Contig121.17.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig121:1369440..1378786- (Heterosigma akashiwo CCMP452)back to top |