mRNA_H-akashiwo_Contig1209.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A7S1H271_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H271_HEMAN) HSP 1 Score: 108 bits (269), Expect = 4.770e-26 Identity = 61/160 (38.12%), Postives = 88/160 (55.00%), Query Frame = 1
Query: 1 SDKDCPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEE-VSDSLAYVKFTSRF--------------SAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGDV 435
SD++C CCSGK+YK+CC+ + P S +MRSRY AYA R D ++ TTH TN +WR D+ W++ L F D + FL L V E + SD ++ F ++ F K ++ +A + F ERS+F+ E++G W YVEGDV
Sbjct: 56 SDEECVCCSGKSYKECCQKFHSGDSWPSSPLELMRSRYSAYAYRLPDWVIGTTHKTNVDWRADQTSWRRELLGFCDGFEFLGLEVLEEDAGESDKEYFITFLAKLRTLKQPTSTSKHVKQTFSKIKSQHQNDA-LNADFKERSRFLLEDEG-WMYVEGDV 213
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A356KFN4_9BACT (Zinc chelation protein SecC n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KFN4_9BACT) HSP 1 Score: 103 bits (258), Expect = 1.100e-25 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGDVK 438
CPC SG YK CC P+ +G PP AEA+MRSRY AYA VD++L TTHP W DD+ +W AF+ F L + E + A+V F + S + G+D F+ERS+F++E DG W Y G+ +
Sbjct: 10 CPCHSGAKYKRCCRPF-HQGSAPPRAEALMRSRYAAYALGLVDYVLATTHPEGPNWEDDRAEWAAGVAAFSQSTSFDGLEILSSGE-GEGEAFVTFRASLS-----------KEGEDASFSERSRFLRE-DGRWLYHSGEPR 137
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A1W1E8G1_9ZZZZ (UPF0225 protein YchJ n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1E8G1_9ZZZZ) HSP 1 Score: 101 bits (251), Expect = 1.120e-24 Identity = 55/142 (38.73%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGDVK 438
CPC S YK CC+ Y KG P+A +MRSRY AYA +I+KTTHP N+++ ++K++WK+ + F +FL LN+ ++ E D+ AY+ F + S+ K E+S+F+KE +G WYYV+G K
Sbjct: 10 CPCGSSLKYKKCCQKY-HKGAVAPTAALLMRSRYSAYAVGDAAYIMKTTHPQNSDYTEEKIQWKEEIMQFCHHTQFLRLNITKIAE-GDTEAYISFKAHLSSGILK---------------EKSRFLKE-NGRWYYVDGIFK 133
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A432ST54_9PROT (Zinc chelation protein SecC n=1 Tax=Sulfurospirillum sp. TaxID=2053622 RepID=A0A432ST54_9PROT) HSP 1 Score: 100 bits (250), Expect = 2.800e-24 Identity = 58/140 (41.43%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGD 432
CPC SGK YK CC P+ KG P A +M+SRY AYA + +ILKTTHP N ++ +D+ WK++ AF FL L + +V+E + AYV FT+ + K ERS+FVKEE G W Y G+
Sbjct: 28 CPCGSGKKYKKCCAPF-HKGAQPKDALTLMKSRYSAYAAGESGYILKTTHPDNVDFSEDRAAWKRSVDAFCKSTAFLGLEIVDVQEGVEE-AYVTFTAHLDSGDLK---------------ERSRFVKEE-GRWLYHSGE 149
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A2S9YEV7_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YEV7_9DELT) HSP 1 Score: 95.5 bits (236), Expect = 2.660e-22 Identity = 55/140 (39.29%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGD 432
CPC SG+ +K CC L +G EA+MRSRY AYA V+++L TT P + RDD+ W + F+ RF L V+EV + D A V F ++ S G+D F ERS FV+ DG W+YV G+
Sbjct: 8 CPCGSGRKFKRCCR-RLHQGTPAADPEALMRSRYSAYAVGAVEYLLDTTDPEGPQHRDDRAAWAEEIRRFSTLTRFQKLEVREVGPIVDDRAEVLFFAKLSR-----------EGQDVSFAERSVFVRR-DGRWFYVSGE 134
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A091AM67_9PROT (Zinc chelation protein SecC n=1 Tax=Sulfuricurvum sp. MLSB TaxID=1537917 RepID=A0A091AM67_9PROT) HSP 1 Score: 94.4 bits (233), Expect = 5.750e-22 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGD 432
CPC SGK YK CC+PY KG P +A +MR+RY AYA D+I+KTTHP N ++ +D+ WKK L F+ + F L + E + ++ A+V F + + K E+S+F+KE +G W Y G+
Sbjct: 9 CPCHSGKKYKQCCQPY-HKGTVPATAVLLMRTRYSAYALGLADYIIKTTHPNNPDFTEDRADWKKNILHFSQDTVFEGLKIIEFID-GENEAFVTFEAALGNYAMK---------------EKSRFLKE-NGRWLYESGE 130
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A2H0VWG6_9BACT (Zinc chelation protein SecC n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 TaxID=1973936 RepID=A0A2H0VWG6_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 1.090e-21 Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEG 429
CPCCSGK+Y+ CC+ Y D G+ PP+A +MRSRY AYA KV +I++TTHP + + D KW+K F + RF+ L + + S V F + E G F E+S F K DG W Y+ G
Sbjct: 3 CPCCSGKSYEQCCKLYHD-GMLPPTALDLMRSRYSAYALSKVSYIIETTHPQSPYFEKDVSKWEKGVRQFCNTTRFVKLEILHPKYPDPSDPTVHFIAYL------------EQGAPFQLNEKSHFEKL-DGKWLYLSG 127
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A1P8KQL6_9PROT (Uncharacterized protein n=1 Tax=Poseidonibacter parvus TaxID=1850254 RepID=A0A1P8KQL6_9PROT) HSP 1 Score: 92.0 bits (227), Expect = 4.980e-21 Identity = 50/140 (35.71%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNV-QEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEG 429
C C S K YK CC+P+ D G+ P A +MRSR+CA+A +K ++I+ TTH +N+++ DD W++ F D +F+SL++ +E+ + +S K T + + G+D F E+S+F+K E+ W YV+G
Sbjct: 9 CLCNSDKKYKKCCKPFHD-GVLPTLAVELMRSRFCAFALKKAEYIINTTHKSNSDFTDDLKAWREDIELFCDNTKFISLDILEEINGLDESFVSFKAT-------------LLQNGQDASFKEKSRFLKVEN-RWVYVDG 133
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A7C3QQF9_9PROT (Zinc chelation protein SecC n=1 Tax=Epsilonproteobacteria bacterium TaxID=2026809 RepID=A0A7C3QQF9_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 3.120e-20 Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNVQEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGDV 435
CPC SG+ YK CC Y KG P +A +M+S Y AYA D+I+KTTHP N ++ DD+ WK + F E RF L + E EV S +V F + S GE ERS+F+ E+ G W YV+G++
Sbjct: 10 CPCGSGQKYKKCCARY-HKGALPANALLLMKSHYSAYAVGNSDYIIKTTHPDNPDYTDDRKTWKASINRFCRETRFEGLKIIEWSEVG-SETFVIFNAALSG---------GE------MIERSRFLNEQ-GSWLYVDGEM 132
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Match: A0A7W1J1R4_9BACT (UPF0225 protein H0W78_19970 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1J1R4_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 9.170e-20 Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 13 CPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILKTTHPTNTEWRDDKVKWKKAALAFADEYRFLSLNV--QEVEEVSDSLAYVKFTSRFSAFGKKSTKEMGEAGKDFPFTERSKFVKEEDGLWYYVEGD 432
CPC SG++Y +CCEP+L ++PP+AEA+MRSRY AYA +VD++ T P + E D K AA ++ + ++ L+V +E +D V+F ++F GK+ ERS+F K +G W+Y++G+
Sbjct: 11 CPCTSGRSYGECCEPFLTGKVNPPTAEALMRSRYTAYAVGQVDYVAATDDPGSREKFD-----KNAAEQWSSKSEWIGLDVIAKEGGGANDQEGVVEFAAKFKL-----------GGKEHAHRERSRF-KRIEGKWHYIDGE 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1209.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1209.5.1 >prot_H-akashiwo_Contig1209.5.1 ID=prot_H-akashiwo_Contig1209.5.1|Name=mRNA_H-akashiwo_Contig1209.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=151bp SDKDCPCCSGKTYKDCCEPYLDKGIDPPSAEAMMRSRYCAYATRKVDHILback to top mRNA from alignment at H-akashiwo_Contig1209:207166..207618+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1209.5.1 ID=mRNA_H-akashiwo_Contig1209.5.1|Name=mRNA_H-akashiwo_Contig1209.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=453bp|location=Sequence derived from alignment at H-akashiwo_Contig1209:207166..207618+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1209:207166..207618+ >mRNA_H-akashiwo_Contig1209.5.1 ID=mRNA_H-akashiwo_Contig1209.5.1|Name=mRNA_H-akashiwo_Contig1209.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=453bp|location=Sequence derived from alignment at H-akashiwo_Contig1209:207166..207618+ (Heterosigma akashiwo CCMP452)back to top |