mRNA_H-akashiwo_Contig1208.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1208.4.1
Unique NamemRNA_H-akashiwo_Contig1208.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A7S1NIE5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NIE5_9EUGL)

HSP 1 Score: 291 bits (746), Expect = 4.970e-95
Identity = 149/286 (52.10%), Postives = 193/286 (67.48%), Query Frame = 1
Query:   55 KLTVNYMCLQQCNMKCKYCYSTFKDDPIG--KKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNA----FASEGSRFEKTLRY---VDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALARE-MGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVVENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVY 882
            K TV+YM +Q CNM+C++CYST+ D P      +GL    A +++  L  SG+ +KITFAGGEPFLR D+  ++   K+LGL TCVVTNA    F  +G   + T R    VDQ A+S DSG   TR ++GRA+ G   L N  Y       RE  G S KLN+V+ A N  EDM+ F++ + P RWKVFQ LPV+GQND HF ++R++ EQF  FC+RHA L+PV E N  MT SY+++DPWGRFFDNSKG HTYSRSILEVGV EA+++ +FD  RY++RGG Y
Sbjct:   13 KFTVSYMWIQACNMRCRFCYSTWNDSPCHGLPPQGLPPPDARRVVQLLAQSGVIDKITFAGGEPFLRPDLADLLAFTKSLGLATCVVTNATRFRFRRDGRPDDNTRRVLDSVDQFALSIDSGSEATRLAMGRAVLGRKALTNEHYCRVAQYVREHTGCSLKLNSVVTAQNCDEDMSAFVKALQPKRWKVFQVLPVEGQNDAHFAELRISAEQFAAFCERHAALDPVRETNHDMTSSYLLVDPWGRFFDNSKGAHTYSRSILEVGVHEAMAETTFDPGRYLDRGGEY 298          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A2Z4FRR3_9DELT (Radical SAM protein n=2 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FRR3_9DELT)

HSP 1 Score: 229 bits (584), Expect = 8.860e-71
Identity = 126/281 (44.84%), Postives = 172/281 (61.21%), Query Frame = 1
Query:   61 TVNYMCLQQCNMKCKYCYSTFKDDPIGKKKG-LDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRH-----AGLNPVVENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
            ++NY   + CN  CK+CY+ F+D      +G L   Q L+++ ++ ++G F KITFAGGEP L   +  +V  AK+ G+ T VV+N    + + F+     +D L +S DS    T  +IGRA KG +     KY     LAR  GI  K+NTV+N  N  EDM+  I  M+P+RWK+FQ LP+ GQND +  ++ +T+ +F+ F  RH     AG+  V E+NE MTGSY M+DP GRFFDN+ G HTYSR ILEVG+ EA S VSFDL  +  RGG YD
Sbjct:    4 SINYHLNKACNYSCKFCYARFEDSAEYLGRGMLPKAQQLEVVRQIAAAG-FEKITFAGGEPTLVPWLAELVATAKDAGMTTMVVSNGSRLDAAAFDAFGGKLDWLVISIDSADDGTHLAIGRAQKGKT-QSAAKYRATADLARHHGIRLKMNTVVNRLNVDEDMSELIAQMAPERWKLFQVLPIDGQNDGYVEELEITRAEFDAFVARHRGLADAGIVVVSESNEAMTGSYAMVDPAGRFFDNTMGAHTYSRPILEVGIREAFSQVSFDLETFKARGGEYD 282          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI00131C1F4D (viperin family antiviral radical SAM protein n=1 Tax=Algibacter sp. L3A6 TaxID=2686366 RepID=UPI00131C1F4D)

HSP 1 Score: 233 bits (594), Expect = 6.090e-70
Identity = 118/282 (41.84%), Postives = 179/282 (63.48%), Query Frame = 1
Query:   61 TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYDLAAN 897
            ++N+   + CNM+CK+C++TFKD    I  K  L    AL+++  + ++G F KITFAGGEP L   + +++++AK LG+ T +VTN      S  ++   Y+D +AVS DS   E    IGRA+ G S L    Y+  +   ++ G   K+NTV+N  N+++++  FIE   P RWKV Q LP+ GQND   ++ ++T E++N F K H  +  +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVGV EA+  + +DL +++ERGGVY+   N
Sbjct:  183 SINFHLWEPCNMRCKFCFATFKDVKQTILPKGHLPEADALKVVENIAAAG-FKKITFAGGEPLLCKWLPNLIKKAKQLGMTTMIVTNGSKLTESFLKENTTYLDWIAVSIDSLEDENNIKIGRAITGKSPLSKAFYYDLVDKIKKHGYGLKINTVVNKVNYKDNLTEFIEYAKPQRWKVLQVLPIVGQNDAKIDEFKITTEEYNYFLKTHIDVKTIVPESNDDIKGSYVMVDPAGRFFDNAQGTHNYSKPILEVGVKEAIKTMDYDLGKFLERGGVYNWENN 463          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: F6GFY9_LACS5 (Radical SAM domain protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) TaxID=983544 RepID=F6GFY9_LACS5)

HSP 1 Score: 228 bits (582), Expect = 3.460e-68
Identity = 115/294 (39.12%), Postives = 184/294 (62.59%), Query Frame = 1
Query:   16 RILKGATVSKALPKL-TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
            +I+K    SKAL ++ ++N+   + CNM+CK+C++TF+D    I  K  L   +AL+++ ++ ++G F KITFAGGEP L   + ++++ AK LG+ T +VTN      +  ++   Y+D +AVS DS   E    IGRA+ G   L    Y+  +   +  G   K+NTV+N  N+++++  FIE   P RWKV Q LP++GQND   +  ++T  ++  F   H  +  +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVG+ EAL  +++DL +++ RGG+Y+
Sbjct:  167 KIIKHYQESKALIEIPSINFHLWEPCNMRCKFCFATFQDVKQTILPKGHLPESEALKVVEQIANAG-FEKITFAGGEPLLCKWLPNLIKRAKQLGMTTMIVTNGSKLTDAFLKENTAYLDWIAVSIDSLEGENNIEIGRAITGKKPLSKTYYYDLVKAIKNYGYGLKINTVVNKVNYKDNLTEFIEYAKPKRWKVLQVLPIKGQNDIKIDDFKITDTEYTHFLNTHKNVETIVPESNDEIKGSYVMVDPAGRFFDNAQGTHNYSKPILEVGIKEALKTMNYDLDKFLNRGGIYN 459          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI00187B71A9 (viperin family antiviral radical SAM protein n=8 Tax=Tenacibaculum finnmarkense TaxID=2781243 RepID=UPI00187B71A9)

HSP 1 Score: 226 bits (577), Expect = 1.570e-67
Identity = 113/292 (38.70%), Postives = 180/292 (61.64%), Query Frame = 1
Query:   19 ILKGATVSKALPKLTVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
            I+      K++P  ++N+   + CNM+CK+C++TF+D    +  K  L  ++ALQ+++E+  SG F KITFAGGEP L   + ++++ AKNLG+ T +VTN      +  EK   Y+D +AVS DS   E    +GRA+ G   L+   Y+  +    + G   K+NTV+N  N+ +D+  FI+   P RWKV Q LP+ GQND + ++ ++T  +F  F + H  +  ++ E+NE + GSYVM+DP GRFFDN++G H YS  IL+VG+  A + + +D  +++ RGG+Y+
Sbjct:  168 IIDAFLKQKSIP--SINFHLWEPCNMRCKFCFATFQDVKQTLLPKGHLPEKEALQVVSEIAKSG-FKKITFAGGEPLLCKWLPNLIKTAKNLGMTTMIVTNGSKLTDAFLEKNKPYLDWIAVSIDSLDDEKNIEMGRAITGKKSLKKSFYYSLIERIHKHGYGLKINTVVNKINYNDDLTDFIKNAKPKRWKVLQVLPIVGQNDTNIDKFKITPTEFKHFLETHKEVQEIIPESNEQIKGSYVMVDPAGRFFDNTEGTHNYSEGILKVGIETAYNTMDYDGDKFINRGGIYN 456          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A1I3QG02_9FLAO (Radical S-adenosyl methionine domain-containing protein 2 n=2 Tax=Olleya TaxID=336276 RepID=A0A1I3QG02_9FLAO)

HSP 1 Score: 227 bits (578), Expect = 1.580e-67
Identity = 113/278 (40.65%), Postives = 178/278 (64.03%), Query Frame = 1
Query:   61 TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
            ++N+   + CNM+C++C++TF+D    +  K  L   +ALQ++  + ++G F KITFAGGEP L   + S++++AK LG+ T +VTN      +  +    Y+D +AVS DS   E    IGRA+ G + L    Y+  +   +  G   K+NTV+N  N+++++  FIE  +P RWKV Q LP++GQND   ++ ++T  ++N F   H  +  +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVGV EAL  +++DL ++++RGGVYD
Sbjct:  183 SINFHLWKACNMRCEFCFATFEDVVRDVVPKGHLPEAEALQVVENIAAAG-FEKITFAGGEPLLCKWLPSLIKKAKQLGMTTMIVTNGSKLTDAFLKANTAYLDWIAVSIDSLEDENNIKIGRAITGKTPLSKAFYYDLVDTIKMYGYGLKINTVVNKVNYKDNLTEFIEYANPQRWKVLQVLPIEGQNDIKIDKFKITTAEYNYFLTTHEDVKTIVPESNDEIKGSYVMVDPAGRFFDNAEGTHNYSKPILEVGVQEALKTMNYDLEKFLDRGGVYD 459          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A2P7TUX5_9SPHI (Radical SAM protein n=1 Tax=Sphingobacteriales bacterium UPWRP_1 TaxID=2116516 RepID=A0A2P7TUX5_9SPHI)

HSP 1 Score: 220 bits (561), Expect = 3.410e-67
Identity = 119/281 (42.35%), Postives = 169/281 (60.14%), Query Frame = 1
Query:   61 TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPV-----VENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVY 882
            +VN+   Q CNM+CK+C++TF D    +  K  L  EQ +Q++ +L  +G+  KITF GGEP L   +  +++ AK LG+ T +VTN         +    + D +A+S DS   ET+ +IGRA+ G  I+    Y +   + ++  I  K+NTV+N +N  EDM+ FI  + P+RWK+FQ LP++GQN        ++ E+F  F KRH  L  +      E+N+ MTGSYVMIDP GRFFDN  G  TYSR ILEVGV  AL D+ FD +++V RGG Y
Sbjct:    5 SVNFHLWQPCNMRCKFCFATFLDVKQSVLPKGHLPKEQTIQVVGQLAKAGV-KKITFVGGEPTLCPWLSQLLQTAKQLGMTTMIVTNGSRLTPEYLDTIQPHTDWIALSIDSVNAETQLTIGRAVSG-KIIPEEGYEHIAQMIKDRNICLKVNTVVNRFNLAEDMSQFIVRLQPERWKLFQVLPIEGQNCGTVAPFLISDEEFKQFVKRHIHLEQIGIAMQPEDNDAMTGSYVMIDPAGRFFDNVSGELTYSRPILEVGVKAALEDICFDYSKFVARGGNY 283          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI001AF70DF4 (Radical SAM protein n=2 Tax=Lacinutrix sp. WUR7 TaxID=2653681 RepID=UPI001AF70DF4)

HSP 1 Score: 226 bits (576), Expect = 3.620e-67
Identity = 114/293 (38.91%), Postives = 182/293 (62.12%), Query Frame = 1
Query:   19 ILKGATVSKALPKL-TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
            I++    S ++ K+ ++N+   + CNM+CK+C++TF+D    I  K  L   +AL+++ ++ ++G F KITFAGGEP L   + ++++ AK LG+ T +VTN      +  E    Y+D +AVS DS   E    IGRA+ G   L    Y+  +    + G   K+NTV+N  N+++++  FIE   P RWKV Q LP++GQND   ++ ++T  +++ F   H  +  +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVG+ EAL  + +DL ++ +RGG+YD
Sbjct:  176 IMEHYQKSNSVTKIPSINFHLWEPCNMRCKFCFATFQDVKQTILPKGHLPETEALEVVRKIAAAG-FEKITFAGGEPLLCKWLPNLIKTAKQLGMTTMIVTNGSKLTDAFLENNKPYLDWIAVSIDSLEDENNIKIGRAITGKRALSKAFYYDLIDKIHQYGYGLKINTVVNKVNYKDNLVDFIEHAKPKRWKVLQVLPIKGQNDNKIDEFKITNAEYSHFLNTHKDVKTIVPESNDEIKGSYVMVDPAGRFFDNAQGTHNYSKPILEVGIQEALKTMDYDLDKFEKRGGIYD 467          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI000F5B0946 (viperin family antiviral radical SAM protein n=1 Tax=Amniculibacterium aquaticum TaxID=2479858 RepID=UPI000F5B0946)

HSP 1 Score: 220 bits (560), Expect = 4.680e-67
Identity = 116/280 (41.43%), Postives = 163/280 (58.21%), Query Frame = 1
Query:   61 TVNYMCLQQCNMKCKYCYSTFKDDPIGKKKG-LDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNP----VVENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
            +VNY  L+ CNM+CK+C++ FKD     KKG L  E AL L+ E++  G F KITFAGGEP L   I  ++ EAKNLG+ T +VTN          K    +D + +S DS + +     GRA+ G        Y   + L  E G   K+NTV++ +N++E    FI     +RWKVFQ LP++G+ND++  Q ++T  +FN F   H  L      V E+N  M  SYVMIDP GRF+ N KG   YS+SILEVGV EA  ++ +++ +++ R G+YD
Sbjct:   11 SVNYHVLEACNMRCKFCFAPFKDAKGILKKGFLVKEDALSLLKEISRLG-FKKITFAGGEPTLYPWITDLIVEAKNLGMTTMIVTNGTNINDEFLNKHKGVLDWIILSIDSFIPDVNIQSGRAINGKKAFTTDDYLKMINLINEHGFKLKINTVVHQFNYEESFLDFISMSKTERWKVFQVLPIKGENDKYIEQFKITDHEFNQFLSNHQTLIDSGILVPESNSQMVDSYVMIDPVGRFYTNKKGYQEYSKSILEVGVYEAYKEMDYNIPKFLARNGMYD 289          
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A4V1D6X7_9FLAO (Radical SAM protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A4V1D6X7_9FLAO)

HSP 1 Score: 225 bits (573), Expect = 8.520e-67
Identity = 118/294 (40.14%), Postives = 179/294 (60.88%), Query Frame = 1
Query:   25 KGATVSKALPKLTVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYDLAAN 897
            K  TV+K +P  +VN+   Q CNM+CK+C++TF D       K  L  ++AL+++ ++ ++G F KITFAGGEP L   +  +++ AK LG+ T +VTN      S  ++   Y+D +AVS DS   E    +GRA+ G   L    Y+  +    + G   K+NTV+N  N+++++A FI    P RWKV Q LP++GQND   +  ++T E++  F   H  +  +V E+N+ + GSYVM+DP GRFFDN+ G H YS+ ILEVG+ EAL  +++D  +++ RGGVYD   N
Sbjct:  174 KSNTVTK-IP--SVNFHLWQPCNMRCKFCFATFLDVKQEYVPKGHLPEDEALEVVRKIAAAG-FEKITFAGGEPLLCKWLPKLIKTAKELGMTTMIVTNGSQLTDSFLKENKAYLDWIAVSIDSLDEENNIKMGRAITGQKPLSKTFYYELINKIHQYGYGLKINTVVNKVNYKDNLASFIAKAKPKRWKVLQVLPIKGQNDNKIDAFKITDEEYAHFLDTHKDVETIVPESNDEIKGSYVMVDPAGRFFDNAAGTHNYSKPILEVGIQEALKTMNYDFDKFLNRGGVYDWNTN 463          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1NIE5_9EUGL4.970e-9552.10Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A2Z4FRR3_9DELT8.860e-7144.84Radical SAM protein n=2 Tax=Bradymonas sediminis T... [more]
UPI00131C1F4D6.090e-7041.84viperin family antiviral radical SAM protein n=1 T... [more]
F6GFY9_LACS53.460e-6839.12Radical SAM domain protein n=1 Tax=Lacinutrix sp. ... [more]
UPI00187B71A91.570e-6738.70viperin family antiviral radical SAM protein n=8 T... [more]
A0A1I3QG02_9FLAO1.580e-6740.65Radical S-adenosyl methionine domain-containing pr... [more]
A0A2P7TUX5_9SPHI3.410e-6742.35Radical SAM protein n=1 Tax=Sphingobacteriales bac... [more]
UPI001AF70DF43.620e-6738.91Radical SAM protein n=2 Tax=Lacinutrix sp. WUR7 Ta... [more]
UPI000F5B09464.680e-6741.43viperin family antiviral radical SAM protein n=1 T... [more]
A0A4V1D6X7_9FLAO8.520e-6740.14Radical SAM protein n=2 Tax=Flavobacteriaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1208contigH-akashiwo_Contig1208:233696..234592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog983544.Lacal_2142
PFAMsCytidylate_kin2
Model size897
Max annot lvl976|Bacteroidetes
KEGG koko:K15045
KEGG Pathwayko05164,map05164
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.67e-69
EggNOG OGsCOG0535@1|root,COG1102@1|root,COG0535@2|Bacteria,COG1102@2|Bacteria,4NW44@976|Bacteroidetes
DescriptionCytidylate kinase-like family
Cds size897
COG categoryF
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387120.5711672-CDS-H-akashiwo_Contig1208:233695..2345921681387120.5711672-CDS-H-akashiwo_Contig1208:233695..234592Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1208 233696..234592 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1208.4.1prot_H-akashiwo_Contig1208.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1208 233696..234592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1208.4.1

>prot_H-akashiwo_Contig1208.4.1 ID=prot_H-akashiwo_Contig1208.4.1|Name=mRNA_H-akashiwo_Contig1208.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=299bp
MRQTYRILKGATVSKALPKLTVNYMCLQQCNMKCKYCYSTFKDDPIGKKK
GLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLT
CVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILR
NRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQA
LPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVVENNEMMTGSYVMIDP
WGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYDLAAN
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mRNA from alignment at H-akashiwo_Contig1208:233696..234592-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1208.4.1 ID=mRNA_H-akashiwo_Contig1208.4.1|Name=mRNA_H-akashiwo_Contig1208.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig1208:233696..234592- (Heterosigma akashiwo CCMP452)
ATGCGACAAACTTACAGAATCTTGAAAGGCGCTACTGTTTCTAAAGCTTT ACCTAAGCTGACAGTGAACTACATGTGCCTGCAGCAGTGCAATATGAAGT GTAAGTACTGCTACTCAACCTTTAAAGATGACCCCATCGGCAAGAAAAAA GGCTTGGACACAGAGCAAGCGCTCCAGCTGATCAACGAACTCAACTCCAG CGGCCTTTTCAACAAAATCACCTTTGCGGGGGGAGAGCCTTTTCTTCGTG GAGACATCCTTTCCATGGTGAGAGAAGCCAAAAATCTAGGGCTGCTGACT TGCGTGGTAACAAATGCTTTTGCCTCCGAAGGGAGCAGGTTTGAAAAGAC TTTAAGGTACGTGGACCAACTGGCAGTCAGTTTTGACTCTGGCCTACTGG AAACCAGAGCAAGCATAGGCCGAGCCCTGAAAGGTGTTTCAATATTGAGA AATAGGAAGTACTTCTATGCCCTTGCACTGGCTCGGGAGATGGGCATCTC AACAAAGCTCAACACTGTCATCAATGCATACAACTGGCAGGAGGACATGG CACCATTCATTGAGACAATGAGTCCTGATCGCTGGAAAGTCTTCCAGGCC CTGCCTGTGCAGGGGCAGAATGATGAGCATTTCAATCAAATCAGGGTGAC ACAGGAGCAGTTTAACGACTTCTGCAAGCGACATGCAGGGCTGAACCCAG TGGTGGAGAATAATGAAATGATGACCGGGTCCTATGTCATGATCGACCCT TGGGGACGCTTTTTTGATAACAGTAAGGGGCGCCATACATACAGCCGTTC CATCTTGGAGGTGGGAGTGGCAGAGGCTCTATCAGATGTGAGTTTTGATC TGGCCCGTTATGTGGAGCGTGGTGGGGTATATGATCTTGCAGCAAAT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1208:233696..234592-

>mRNA_H-akashiwo_Contig1208.4.1 ID=mRNA_H-akashiwo_Contig1208.4.1|Name=mRNA_H-akashiwo_Contig1208.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig1208:233696..234592- (Heterosigma akashiwo CCMP452)
ATGCGACAAACTTACAGAATCTTGAAAGGCGCTACTGTTTCTAAAGCTTT
ACCTAAGCTGACAGTGAACTACATGTGCCTGCAGCAGTGCAATATGAAGT
GTAAGTACTGCTACTCAACCTTTAAAGATGACCCCATCGGCAAGAAAAAA
GGCTTGGACACAGAGCAAGCGCTCCAGCTGATCAACGAACTCAACTCCAG
CGGCCTTTTCAACAAAATCACCTTTGCGGGGGGAGAGCCTTTTCTTCGTG
GAGACATCCTTTCCATGGTGAGAGAAGCCAAAAATCTAGGGCTGCTGACT
TGCGTGGTAACAAATGCTTTTGCCTCCGAAGGGAGCAGGTTTGAAAAGAC
TTTAAGGTACGTGGACCAACTGGCAGTCAGTTTTGACTCTGGCCTACTGG
AAACCAGAGCAAGCATAGGCCGAGCCCTGAAAGGTGTTTCAATATTGAGA
AATAGGAAGTACTTCTATGCCCTTGCACTGGCTCGGGAGATGGGCATCTC
AACAAAGCTCAACACTGTCATCAATGCATACAACTGGCAGGAGGACATGG
CACCATTCATTGAGACAATGAGTCCTGATCGCTGGAAAGTCTTCCAGGCC
CTGCCTGTGCAGGGGCAGAATGATGAGCATTTCAATCAAATCAGGGTGAC
ACAGGAGCAGTTTAACGACTTCTGCAAGCGACATGCAGGGCTGAACCCAG
TGGTGGAGAATAATGAAATGATGACCGGGTCCTATGTCATGATCGACCCT
TGGGGACGCTTTTTTGATAACAGTAAGGGGCGCCATACATACAGCCGTTC
CATCTTGGAGGTGGGAGTGGCAGAGGCTCTATCAGATGTGAGTTTTGATC
TGGCCCGTTATGTGGAGCGTGGTGGGGTATATGATCTTGCAGCAAAT
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