mRNA_H-akashiwo_Contig1208.4.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A7S1NIE5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NIE5_9EUGL) HSP 1 Score: 291 bits (746), Expect = 4.970e-95 Identity = 149/286 (52.10%), Postives = 193/286 (67.48%), Query Frame = 1
Query: 55 KLTVNYMCLQQCNMKCKYCYSTFKDDPIG--KKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNA----FASEGSRFEKTLRY---VDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALARE-MGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVVENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVY 882
K TV+YM +Q CNM+C++CYST+ D P +GL A +++ L SG+ +KITFAGGEPFLR D+ ++ K+LGL TCVVTNA F +G + T R VDQ A+S DSG TR ++GRA+ G L N Y RE G S KLN+V+ A N EDM+ F++ + P RWKVFQ LPV+GQND HF ++R++ EQF FC+RHA L+PV E N MT SY+++DPWGRFFDNSKG HTYSRSILEVGV EA+++ +FD RY++RGG Y
Sbjct: 13 KFTVSYMWIQACNMRCRFCYSTWNDSPCHGLPPQGLPPPDARRVVQLLAQSGVIDKITFAGGEPFLRPDLADLLAFTKSLGLATCVVTNATRFRFRRDGRPDDNTRRVLDSVDQFALSIDSGSEATRLAMGRAVLGRKALTNEHYCRVAQYVREHTGCSLKLNSVVTAQNCDEDMSAFVKALQPKRWKVFQVLPVEGQNDAHFAELRISAEQFAAFCERHAALDPVRETNHDMTSSYLLVDPWGRFFDNSKGAHTYSRSILEVGVHEAMAETTFDPGRYLDRGGEY 298
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A2Z4FRR3_9DELT (Radical SAM protein n=2 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FRR3_9DELT) HSP 1 Score: 229 bits (584), Expect = 8.860e-71 Identity = 126/281 (44.84%), Postives = 172/281 (61.21%), Query Frame = 1
Query: 61 TVNYMCLQQCNMKCKYCYSTFKDDPIGKKKG-LDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRH-----AGLNPVVENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
++NY + CN CK+CY+ F+D +G L Q L+++ ++ ++G F KITFAGGEP L + +V AK+ G+ T VV+N + + F+ +D L +S DS T +IGRA KG + KY LAR GI K+NTV+N N EDM+ I M+P+RWK+FQ LP+ GQND + ++ +T+ +F+ F RH AG+ V E+NE MTGSY M+DP GRFFDN+ G HTYSR ILEVG+ EA S VSFDL + RGG YD
Sbjct: 4 SINYHLNKACNYSCKFCYARFEDSAEYLGRGMLPKAQQLEVVRQIAAAG-FEKITFAGGEPTLVPWLAELVATAKDAGMTTMVVSNGSRLDAAAFDAFGGKLDWLVISIDSADDGTHLAIGRAQKGKT-QSAAKYRATADLARHHGIRLKMNTVVNRLNVDEDMSELIAQMAPERWKLFQVLPIDGQNDGYVEELEITRAEFDAFVARHRGLADAGIVVVSESNEAMTGSYAMVDPAGRFFDNTMGAHTYSRPILEVGIREAFSQVSFDLETFKARGGEYD 282
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI00131C1F4D (viperin family antiviral radical SAM protein n=1 Tax=Algibacter sp. L3A6 TaxID=2686366 RepID=UPI00131C1F4D) HSP 1 Score: 233 bits (594), Expect = 6.090e-70 Identity = 118/282 (41.84%), Postives = 179/282 (63.48%), Query Frame = 1
Query: 61 TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYDLAAN 897
++N+ + CNM+CK+C++TFKD I K L AL+++ + ++G F KITFAGGEP L + +++++AK LG+ T +VTN S ++ Y+D +AVS DS E IGRA+ G S L Y+ + ++ G K+NTV+N N+++++ FIE P RWKV Q LP+ GQND ++ ++T E++N F K H + +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVGV EA+ + +DL +++ERGGVY+ N
Sbjct: 183 SINFHLWEPCNMRCKFCFATFKDVKQTILPKGHLPEADALKVVENIAAAG-FKKITFAGGEPLLCKWLPNLIKKAKQLGMTTMIVTNGSKLTESFLKENTTYLDWIAVSIDSLEDENNIKIGRAITGKSPLSKAFYYDLVDKIKKHGYGLKINTVVNKVNYKDNLTEFIEYAKPQRWKVLQVLPIVGQNDAKIDEFKITTEEYNYFLKTHIDVKTIVPESNDDIKGSYVMVDPAGRFFDNAQGTHNYSKPILEVGVKEAIKTMDYDLGKFLERGGVYNWENN 463
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: F6GFY9_LACS5 (Radical SAM domain protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) TaxID=983544 RepID=F6GFY9_LACS5) HSP 1 Score: 228 bits (582), Expect = 3.460e-68 Identity = 115/294 (39.12%), Postives = 184/294 (62.59%), Query Frame = 1
Query: 16 RILKGATVSKALPKL-TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
+I+K SKAL ++ ++N+ + CNM+CK+C++TF+D I K L +AL+++ ++ ++G F KITFAGGEP L + ++++ AK LG+ T +VTN + ++ Y+D +AVS DS E IGRA+ G L Y+ + + G K+NTV+N N+++++ FIE P RWKV Q LP++GQND + ++T ++ F H + +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVG+ EAL +++DL +++ RGG+Y+
Sbjct: 167 KIIKHYQESKALIEIPSINFHLWEPCNMRCKFCFATFQDVKQTILPKGHLPESEALKVVEQIANAG-FEKITFAGGEPLLCKWLPNLIKRAKQLGMTTMIVTNGSKLTDAFLKENTAYLDWIAVSIDSLEGENNIEIGRAITGKKPLSKTYYYDLVKAIKNYGYGLKINTVVNKVNYKDNLTEFIEYAKPKRWKVLQVLPIKGQNDIKIDDFKITDTEYTHFLNTHKNVETIVPESNDEIKGSYVMVDPAGRFFDNAQGTHNYSKPILEVGIKEALKTMNYDLDKFLNRGGIYN 459
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI00187B71A9 (viperin family antiviral radical SAM protein n=8 Tax=Tenacibaculum finnmarkense TaxID=2781243 RepID=UPI00187B71A9) HSP 1 Score: 226 bits (577), Expect = 1.570e-67 Identity = 113/292 (38.70%), Postives = 180/292 (61.64%), Query Frame = 1
Query: 19 ILKGATVSKALPKLTVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
I+ K++P ++N+ + CNM+CK+C++TF+D + K L ++ALQ+++E+ SG F KITFAGGEP L + ++++ AKNLG+ T +VTN + EK Y+D +AVS DS E +GRA+ G L+ Y+ + + G K+NTV+N N+ +D+ FI+ P RWKV Q LP+ GQND + ++ ++T +F F + H + ++ E+NE + GSYVM+DP GRFFDN++G H YS IL+VG+ A + + +D +++ RGG+Y+
Sbjct: 168 IIDAFLKQKSIP--SINFHLWEPCNMRCKFCFATFQDVKQTLLPKGHLPEKEALQVVSEIAKSG-FKKITFAGGEPLLCKWLPNLIKTAKNLGMTTMIVTNGSKLTDAFLEKNKPYLDWIAVSIDSLDDEKNIEMGRAITGKKSLKKSFYYSLIERIHKHGYGLKINTVVNKINYNDDLTDFIKNAKPKRWKVLQVLPIVGQNDTNIDKFKITPTEFKHFLETHKEVQEIIPESNEQIKGSYVMVDPAGRFFDNTEGTHNYSEGILKVGIETAYNTMDYDGDKFINRGGIYN 456
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A1I3QG02_9FLAO (Radical S-adenosyl methionine domain-containing protein 2 n=2 Tax=Olleya TaxID=336276 RepID=A0A1I3QG02_9FLAO) HSP 1 Score: 227 bits (578), Expect = 1.580e-67 Identity = 113/278 (40.65%), Postives = 178/278 (64.03%), Query Frame = 1
Query: 61 TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
++N+ + CNM+C++C++TF+D + K L +ALQ++ + ++G F KITFAGGEP L + S++++AK LG+ T +VTN + + Y+D +AVS DS E IGRA+ G + L Y+ + + G K+NTV+N N+++++ FIE +P RWKV Q LP++GQND ++ ++T ++N F H + +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVGV EAL +++DL ++++RGGVYD
Sbjct: 183 SINFHLWKACNMRCEFCFATFEDVVRDVVPKGHLPEAEALQVVENIAAAG-FEKITFAGGEPLLCKWLPSLIKKAKQLGMTTMIVTNGSKLTDAFLKANTAYLDWIAVSIDSLEDENNIKIGRAITGKTPLSKAFYYDLVDTIKMYGYGLKINTVVNKVNYKDNLTEFIEYANPQRWKVLQVLPIEGQNDIKIDKFKITTAEYNYFLTTHEDVKTIVPESNDEIKGSYVMVDPAGRFFDNAEGTHNYSKPILEVGVQEALKTMNYDLEKFLDRGGVYD 459
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A2P7TUX5_9SPHI (Radical SAM protein n=1 Tax=Sphingobacteriales bacterium UPWRP_1 TaxID=2116516 RepID=A0A2P7TUX5_9SPHI) HSP 1 Score: 220 bits (561), Expect = 3.410e-67 Identity = 119/281 (42.35%), Postives = 169/281 (60.14%), Query Frame = 1
Query: 61 TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPV-----VENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVY 882
+VN+ Q CNM+CK+C++TF D + K L EQ +Q++ +L +G+ KITF GGEP L + +++ AK LG+ T +VTN + + D +A+S DS ET+ +IGRA+ G I+ Y + + ++ I K+NTV+N +N EDM+ FI + P+RWK+FQ LP++GQN ++ E+F F KRH L + E+N+ MTGSYVMIDP GRFFDN G TYSR ILEVGV AL D+ FD +++V RGG Y
Sbjct: 5 SVNFHLWQPCNMRCKFCFATFLDVKQSVLPKGHLPKEQTIQVVGQLAKAGV-KKITFVGGEPTLCPWLSQLLQTAKQLGMTTMIVTNGSRLTPEYLDTIQPHTDWIALSIDSVNAETQLTIGRAVSG-KIIPEEGYEHIAQMIKDRNICLKVNTVVNRFNLAEDMSQFIVRLQPERWKLFQVLPIEGQNCGTVAPFLISDEEFKQFVKRHIHLEQIGIAMQPEDNDAMTGSYVMIDPAGRFFDNVSGELTYSRPILEVGVKAALEDICFDYSKFVARGGNY 283
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI001AF70DF4 (Radical SAM protein n=2 Tax=Lacinutrix sp. WUR7 TaxID=2653681 RepID=UPI001AF70DF4) HSP 1 Score: 226 bits (576), Expect = 3.620e-67 Identity = 114/293 (38.91%), Postives = 182/293 (62.12%), Query Frame = 1
Query: 19 ILKGATVSKALPKL-TVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
I++ S ++ K+ ++N+ + CNM+CK+C++TF+D I K L +AL+++ ++ ++G F KITFAGGEP L + ++++ AK LG+ T +VTN + E Y+D +AVS DS E IGRA+ G L Y+ + + G K+NTV+N N+++++ FIE P RWKV Q LP++GQND ++ ++T +++ F H + +V E+N+ + GSYVM+DP GRFFDN++G H YS+ ILEVG+ EAL + +DL ++ +RGG+YD
Sbjct: 176 IMEHYQKSNSVTKIPSINFHLWEPCNMRCKFCFATFQDVKQTILPKGHLPETEALEVVRKIAAAG-FEKITFAGGEPLLCKWLPNLIKTAKQLGMTTMIVTNGSKLTDAFLENNKPYLDWIAVSIDSLEDENNIKIGRAITGKRALSKAFYYDLIDKIHQYGYGLKINTVVNKVNYKDNLVDFIEHAKPKRWKVLQVLPIKGQNDNKIDEFKITNAEYSHFLNTHKDVKTIVPESNDEIKGSYVMVDPAGRFFDNAQGTHNYSKPILEVGIQEALKTMDYDLDKFEKRGGIYD 467
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: UPI000F5B0946 (viperin family antiviral radical SAM protein n=1 Tax=Amniculibacterium aquaticum TaxID=2479858 RepID=UPI000F5B0946) HSP 1 Score: 220 bits (560), Expect = 4.680e-67 Identity = 116/280 (41.43%), Postives = 163/280 (58.21%), Query Frame = 1
Query: 61 TVNYMCLQQCNMKCKYCYSTFKDDPIGKKKG-LDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNP----VVENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYD 885
+VNY L+ CNM+CK+C++ FKD KKG L E AL L+ E++ G F KITFAGGEP L I ++ EAKNLG+ T +VTN K +D + +S DS + + GRA+ G Y + L E G K+NTV++ +N++E FI +RWKVFQ LP++G+ND++ Q ++T +FN F H L V E+N M SYVMIDP GRF+ N KG YS+SILEVGV EA ++ +++ +++ R G+YD
Sbjct: 11 SVNYHVLEACNMRCKFCFAPFKDAKGILKKGFLVKEDALSLLKEISRLG-FKKITFAGGEPTLYPWITDLIVEAKNLGMTTMIVTNGTNINDEFLNKHKGVLDWIILSIDSFIPDVNIQSGRAINGKKAFTTDDYLKMINLINEHGFKLKINTVVHQFNYEESFLDFISMSKTERWKVFQVLPIKGENDKYIEQFKITDHEFNQFLSNHQTLIDSGILVPESNSQMVDSYVMIDPVGRFYTNKKGYQEYSKSILEVGVYEAYKEMDYNIPKFLARNGMYD 289
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Match: A0A4V1D6X7_9FLAO (Radical SAM protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A4V1D6X7_9FLAO) HSP 1 Score: 225 bits (573), Expect = 8.520e-67 Identity = 118/294 (40.14%), Postives = 179/294 (60.88%), Query Frame = 1
Query: 25 KGATVSKALPKLTVNYMCLQQCNMKCKYCYSTFKD--DPIGKKKGLDTEQALQLINELNSSGLFNKITFAGGEPFLRGDILSMVREAKNLGLLTCVVTNAFASEGSRFEKTLRYVDQLAVSFDSGLLETRASIGRALKGVSILRNRKYFYALALAREMGISTKLNTVINAYNWQEDMAPFIETMSPDRWKVFQALPVQGQNDEHFNQIRVTQEQFNDFCKRHAGLNPVV-ENNEMMTGSYVMIDPWGRFFDNSKGRHTYSRSILEVGVAEALSDVSFDLARYVERGGVYDLAAN 897
K TV+K +P +VN+ Q CNM+CK+C++TF D K L ++AL+++ ++ ++G F KITFAGGEP L + +++ AK LG+ T +VTN S ++ Y+D +AVS DS E +GRA+ G L Y+ + + G K+NTV+N N+++++A FI P RWKV Q LP++GQND + ++T E++ F H + +V E+N+ + GSYVM+DP GRFFDN+ G H YS+ ILEVG+ EAL +++D +++ RGGVYD N
Sbjct: 174 KSNTVTK-IP--SVNFHLWQPCNMRCKFCFATFLDVKQEYVPKGHLPEDEALEVVRKIAAAG-FEKITFAGGEPLLCKWLPKLIKTAKELGMTTMIVTNGSQLTDSFLKENKAYLDWIAVSIDSLDEENNIKMGRAITGQKPLSKTFYYELINKIHQYGYGLKINTVVNKVNYKDNLASFIAKAKPKRWKVLQVLPIKGQNDNKIDAFKITDEEYAHFLDTHKDVETIVPESNDEIKGSYVMVDPAGRFFDNAAGTHNYSKPILEVGIQEALKTMNYDFDKFLNRGGVYDWNTN 463 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1208.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1208.4.1 >prot_H-akashiwo_Contig1208.4.1 ID=prot_H-akashiwo_Contig1208.4.1|Name=mRNA_H-akashiwo_Contig1208.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=299bp MRQTYRILKGATVSKALPKLTVNYMCLQQCNMKCKYCYSTFKDDPIGKKKback to top mRNA from alignment at H-akashiwo_Contig1208:233696..234592- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1208.4.1 ID=mRNA_H-akashiwo_Contig1208.4.1|Name=mRNA_H-akashiwo_Contig1208.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig1208:233696..234592- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1208:233696..234592- >mRNA_H-akashiwo_Contig1208.4.1 ID=mRNA_H-akashiwo_Contig1208.4.1|Name=mRNA_H-akashiwo_Contig1208.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig1208:233696..234592- (Heterosigma akashiwo CCMP452)back to top |