mRNA_H-akashiwo_Contig1204.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 369 bits (946), Expect = 8.620e-126 Identity = 175/222 (78.83%), Postives = 197/222 (88.74%), Query Frame = 1
Query: 1 LPDTNRYRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLILRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVFDRHQHVLHNG 666
L D N YRSMVGTLAWVANWTRPELAFTVHKLQ+ Q NPEPKHFEA QRAFRYLKGTQSE LRLGGDL+LRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKLQ AVTTSTVEAEYLALRS +KDIMWLR LL ++ CPQ EPTPV+EDNSAC+EWA DM+V+++ RHFHVSYHLAKEQV LGTI+M Y KT DQVADI TKALNA F+RHQ VLH+G
Sbjct: 129 LSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHG 350
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 199 bits (505), Expect = 4.370e-55 Identity = 100/223 (44.84%), Postives = 140/223 (62.78%), Query Frame = 1
Query: 7 DTNRYRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLILRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEV-FDRHQHVLHNGLS 672
+ ++RS+VGT+ W+A WT PE+A+++H L + +P A+ RYL T+ + + LGG L L AY DADFC +R G+S +G+ I LG SPI+W+S++Q VT +T EAEY++LR+ + D+MWL+ LL L Q P+ EDN ACI WA D VS+ RH HVSYH KE V+ I++ Y T Q+AD+FTK L+ F + VLH LS
Sbjct: 778 EAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLHGKLS 999
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: UPI001F04687D (secreted RxLR effector protein 161-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04687D) HSP 1 Score: 161 bits (408), Expect = 3.510e-46 Identity = 86/218 (39.45%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 28 MVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLI--LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVFDRHQHVLHNGLSC 675
M+G L +V+ TRP++A ++ L Q+ ++P HF+ +R RY+KGT S L+ D L Y+DAD+ + D +S +GYV L +S I W+SK Q+ V ST EAEY+AL ++++WLR LL DL V PT V EDN IE AR+ +T+H V+YH +E++ +K+ Y + D +ADI TK L+ + F + +++L N SC
Sbjct: 1 MIGCLTYVSTATRPDIAASIGVLSQFMSDPSKTHFQGVKRVLRYIKGTISYGLKFSCDKNDELHGYSDADYAGNLDDRRSTSGYVFKLANSTISWSSKKQSTVARSTTEAEYVALSQATQEVIWLRRLLSDLGSKPVSPTTVHEDNQGAIEIARNPKFHNRTKHIDVAYHFVRERILSKEVKVCYCPSKDMIADIMTKGLSKDQFQKLRNLL-NVQSC 217
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A085LNL9_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085LNL9_9BILA) HSP 1 Score: 162 bits (410), Expect = 9.070e-46 Identity = 82/221 (37.10%), Postives = 131/221 (59.28%), Query Frame = 1
Query: 1 LPDTNRYRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLG--GDLILRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVFDRHQHVL 657
L + ++R VG+L ++A +RP++AF V +L + +P ++A +R RYL G+ S++LR G++ L + DAD+ D D KS +GYV +G S I W+SK Q+ V S+ EAEY+A +++ WLR LL D+ PQ PT + EDN CI+ A+ S++T+H V +H ++ E G + + Y +S+ AD+ TK L + FDR+ +L
Sbjct: 52 LSENAQFRKAVGSLLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVSQKLRFSSEGNIKLTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYVAASEACREVQWLRQLLADMEVPQDGPTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTKPLGKDKFDRYLKLL 272
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: UPI0009F3042F (uncharacterized protein LOC110102714 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F3042F) HSP 1 Score: 160 bits (406), Expect = 5.670e-45 Identity = 84/207 (40.58%), Postives = 128/207 (61.84%), Query Frame = 1
Query: 19 YRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGD-LILRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVF 636
YR +VG L ++ TRP+L++ V++ Q + P FEA +R RYL+GT L + GD L+L++Y D+D+ D D KS TG+ LG S + W+ K QT + S+ EAEY A+ S +I+WLR LL +L C Q+EPT + DN++ I A + V +T+H + H ++ ++ G+I++HY T DQ+AD+FTKAL + F
Sbjct: 68 YRQIVGALQYLTV-TRPDLSYVVNRACQQMHQPMVSDFEALKRILRYLQGTIQHGLPINGDSLVLKSYVDSDWAGDHTDRKSTTGFCNFLGTSLVSWSVKKQTTIARSSTEAEYQAIASVTMEIIWLRQLLNELGCSQIEPTKLYCDNTSAIALANNPVYHARTKHIEIDCHFIRDCIKNGSIQVHYISTQDQLADLFTKALPSTRF 273
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR) HSP 1 Score: 169 bits (429), Expect = 9.690e-45 Identity = 91/223 (40.81%), Postives = 136/223 (60.99%), Query Frame = 1
Query: 7 DTNRYRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLI--LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVFDRHQHVLHNGL 669
+ +Y++MVG+L + +RP+LA+ + +L Q+ +NP HF+AA+R FRYL+G+Q+ L G ++ + Y DAD+ D D KS++GYV L SPI W +K QT V STVEAEY A+ K+++WL++LL DL + EPT ++ DN I A++ + KT+H V HL ++ +E GTI + Y T D +AD+ TK L R +HV GL
Sbjct: 1181 NIKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQAAKRVFRYLQGSQATGLVYGSNITTPVLGYCDADYAADG-DRKSISGYVFTLAGSPISWQAKKQTTVAQSTVEAEYAAMAHAAKEMIWLQYLLKDLGMSKYEPTILLCDNQGAISLAKNPLHHAKTKHVDVQLHLIRDHIEKGTINVEYCPTDDMLADLMTKGLA-----RERHVRLMGL 1397
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: UPI0009048C60 (uncharacterized protein LOC109234420 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009048C60) HSP 1 Score: 156 bits (395), Expect = 1.070e-43 Identity = 83/209 (39.71%), Postives = 124/209 (59.33%), Query Frame = 1
Query: 1 LPDTNRYRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGD--LILRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKAL 621
LPD + +R + G L ++ N TRP++++ V L QY NP H +AA RYLKG + + L + +RA+ D+D+ KSV+GYV++LGD PI W SK Q V+ S+ EAEY A+R + +++WL LL +L+ P P PV D+ A + A++ V +T+H V H ++QV G I +H+ T+DQ+ DIFTK L
Sbjct: 33 LPDPSHFRKLKGKLNYLTN-TRPDISYNVQHLSQYMQNPREPHLKAAYHVLRYLKGDPNLGIFLSKNENYGVRAFCDSDWAACPDSRKSVSGYVVLLGDGPISWKSKKQHTVSLSSAEAEYRAVRQVVGELVWLLRLLAELTVPLQLPVPVFCDSQAALHMAKNPVFHERTKHIEVDCHFVRDQVHEGLITLHHISTNDQLVDIFTKPL 240
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.080e-43 Identity = 84/203 (41.38%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 19 YRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLI--LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKAL 621
+RS++G+L+++A TRP++A V +L +Y NP +H++AA + RYLKGT++ + GG + L AY+DAD+ DR D +SV+G V+ML +P+VW + Q V ST EAEY+AL +K+ MW R LL +L Q T + EDN I AR+ +T+H + YH +E++ G I++ Y T +QVAD TK L
Sbjct: 173 FRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A507DL48_9FUNG (Uncharacterized protein n=3 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DL48_9FUNG) HSP 1 Score: 155 bits (392), Expect = 4.610e-43 Identity = 83/222 (37.39%), Postives = 131/222 (59.01%), Query Frame = 1
Query: 4 PDTNRYRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLI-LRAYTDADFCQDRIDGKSVTGYVIMLGDS-PIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQ-----VEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVFDRHQ 648
P YR +VG+L ++ + P++A V L ++ +NP P+H +AA+R RYL+GT + L +GG+ + L Y+DAD+ + ID +S+TGY+ +G++ P+ WASK Q V S+ EAEY+AL ++ +WLR LL L P+ PT + EDN +CI A + V +T+H + +H ++ V+ I + Y T++ VAD TK L A F H+
Sbjct: 30 PQEGEYREIVGSLMYLMICSYPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETIWLRSLLRKLQIPEYLNESARPTTIYEDNQSCISLAMNPVHHARTKHIDIRHHFIRDHVDK-EIHLEYLPTAEMVADSLTKPLPAPAFKYHR 250
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Match: A0A2I0WZT5_9ASPA (Putative mitochondrial protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WZT5_9ASPA) HSP 1 Score: 157 bits (396), Expect = 6.220e-43 Identity = 85/219 (38.81%), Postives = 131/219 (59.82%), Query Frame = 1
Query: 19 YRSMVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSERLRL-GGDLILRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIKMHYAKTSDQVADIFTKALNAEVFDRHQHVLHNGLS 672
Y +VG+L ++ TRP++A+TV++L QY + P HF +R +YL+GT S L L +L LRAY+D+D+ D +D KS TGY LG + I W K Q V S+ EAEY AL + DI+WL+ LL + PTP+ DN + I A + V +T+H + +H +E ++ T+++H+ ++DQ+AD+FTKAL+ + F H L + L+
Sbjct: 102 YTQLVGSLQYLT-LTRPDIAYTVNRLCQYMHQPHEDHFRLLKRLLQYLQGTLSFGLPLVAANLHLRAYSDSDWAGDLVDRKSTTGYCAFLGSNLISWQVKKQKTVARSSTEAEYRALATAATDIIWLKRLLAEFQINSSTPTPLFCDNVSSIALANNPVFHARTKHIEIDFHFVRECIKNATLQVHHIHSTDQIADLFTKALSLQRF----HFLRDKLT 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1204.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1204.3.1 >prot_H-akashiwo_Contig1204.3.1 ID=prot_H-akashiwo_Contig1204.3.1|Name=mRNA_H-akashiwo_Contig1204.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=218bp MVGTLAWVANWTRPELAFTVHKLQQYQNNPEPKHFEAAQRAFRYLKGTQSback to top mRNA from alignment at H-akashiwo_Contig1204:279040..279720- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1204.3.1 ID=mRNA_H-akashiwo_Contig1204.3.1|Name=mRNA_H-akashiwo_Contig1204.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=681bp|location=Sequence derived from alignment at H-akashiwo_Contig1204:279040..279720- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1204:279040..279720- >mRNA_H-akashiwo_Contig1204.3.1 ID=mRNA_H-akashiwo_Contig1204.3.1|Name=mRNA_H-akashiwo_Contig1204.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=654bp|location=Sequence derived from alignment at H-akashiwo_Contig1204:279040..279720- (Heterosigma akashiwo CCMP452)back to top |